FFCP PHASE1:Mm9::chr3:129327349..129327353,+: Difference between revisions
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|id=chr3:129327349..129327353,+ | |id=chr3:129327349..129327353,+ | ||
|ontology_enrichment_celltype=CL:0000393!2.03e-16!39;CL:0000211!2.03e-16!39;CL:0000540!7.78e-16!33;CL:0000047!7.78e-16!33;CL:0000031!7.78e-16!33;CL:0000404!7.78e-16!33;CL:0000221!1.64e-11!44;CL:0000133!1.64e-11!44;CL:0000055!2.05e-11!50;CL:0002319!5.24e-11!43;CL:0000117!7.17e-10!23;CL:0000337!7.17e-10!23;CL:0000107!1.52e-08!9;CL:0002321!2.53e-08!70;CL:0000220!2.53e-08!70 | |ontology_enrichment_celltype=CL:0000393!2.03e-16!39;CL:0000211!2.03e-16!39;CL:0000540!7.78e-16!33;CL:0000047!7.78e-16!33;CL:0000031!7.78e-16!33;CL:0000404!7.78e-16!33;CL:0000221!1.64e-11!44;CL:0000133!1.64e-11!44;CL:0000055!2.05e-11!50;CL:0002319!5.24e-11!43;CL:0000117!7.17e-10!23;CL:0000337!7.17e-10!23;CL:0000107!1.52e-08!9;CL:0002321!2.53e-08!70;CL:0000220!2.53e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.47e-19,9;CL:0000540,4.12e-18,33;CL:0000047,4.12e-18,33;CL:0000031,4.12e-18,33;CL:0000404,4.12e-18,33;CL:0000393,3.14e-17,39;CL:0000211,3.14e-17,39;CL:0002319,2.86e-13,43;CL:0000221,6.61e-13,44;CL:0000133,6.61e-13,44;CL:0002321,4.14e-11,70;CL:0002614,8.39e-11,3;CL:0000723,9.81e-08,91;CL:0000048,9.81e-08,91;CL:0000034,4.72e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!5.25e-09!11;UBERON:0002410!1.52e-08!9 | |ontology_enrichment_uberon=UBERON:0000010!5.25e-09!11;UBERON:0002410!1.52e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.47e-19,9;UBERON:0000010,1.18e-15,11;UBERON:0000013,1.25e-11,3;UBERON:0002038,8.39e-11,3;UBERON:0009663,8.39e-11,3;UBERON:0009661,8.39e-11,3;UBERON:0000125,8.39e-11,3;UBERON:0002308,8.39e-11,3;UBERON:0001962,2.89e-08,2;UBERON:0001961,2.89e-08,2;UBERON:0001744,2.89e-08,2;UBERON:0002950,3.24e-08,4;UBERON:0001891,3.24e-08,4;UBERON:0009616,3.24e-08,4;UBERON:0010286,3.24e-08,4;UBERON:0002420,7.51e-07,8;UBERON:0007245,7.51e-07,8;UBERON:0010009,7.51e-07,8;UBERON:0010011,7.51e-07,8;UBERON:0000454,7.51e-07,8 | |||
|phase1_expression=0,0,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0.516493293766305,0.140788722151667,0,0,0.319088635981346,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0,0,0,1.10556277196391,0.0992909512008853,0,2.87986361028132,1.37645568640302,0,0.430761996159075,0.861884930743556,0.950117097281869,1.76421090831952,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,1.28482726513177,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.405017814995072,0.630974884054146,0.571301968807607,0.220868540951614,0.244981598429908,0.479227355091182,0,0,0,0.46081959976873,0.395658863190582,0.365950574409639,1.04182674111352,1.11673199600552,1.68828783009504,1.37518422999129,1.47314292736834,1.13897344639282,0.931997229126503,0.37863096666592,0.226714680320357,0,0,0,1.07940638327563,0,0,1.82577746171277,0.170430322578058,0,0.70667914902068,0.563373679106722,2.56652954828636,0,0,0,0,0,1.7127581957859,0,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0,0.248813941220186,1.0108910337347,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.272145996605311,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0.660837565967596,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,1.50791283939272,0.54390568381871,0.491764273019036,0,0,0.117211686592203,0.163934945376675,0,3.15508219416257,2.73307121007647,0.861693590931196,2.15071918157297,1.33679204449436,0.566153061577665,2.83367491172426,1.75353514746787,1.58115111178609,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.596861720015682,0.492422699235184,0.582961673259701,0,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0,0.627264888043406,0,0.404593039154462,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.583353565032143,0,0.675824501963113,0,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0,0,0,0,0,0.382576664137687,0,0 | |phase1_expression=0,0,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0.516493293766305,0.140788722151667,0,0,0.319088635981346,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0,0,0,1.10556277196391,0.0992909512008853,0,2.87986361028132,1.37645568640302,0,0.430761996159075,0.861884930743556,0.950117097281869,1.76421090831952,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,1.28482726513177,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.405017814995072,0.630974884054146,0.571301968807607,0.220868540951614,0.244981598429908,0.479227355091182,0,0,0,0.46081959976873,0.395658863190582,0.365950574409639,1.04182674111352,1.11673199600552,1.68828783009504,1.37518422999129,1.47314292736834,1.13897344639282,0.931997229126503,0.37863096666592,0.226714680320357,0,0,0,1.07940638327563,0,0,1.82577746171277,0.170430322578058,0,0.70667914902068,0.563373679106722,2.56652954828636,0,0,0,0,0,1.7127581957859,0,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0,0.248813941220186,1.0108910337347,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.272145996605311,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0.660837565967596,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,1.50791283939272,0.54390568381871,0.491764273019036,0,0,0.117211686592203,0.163934945376675,0,3.15508219416257,2.73307121007647,0.861693590931196,2.15071918157297,1.33679204449436,0.566153061577665,2.83367491172426,1.75353514746787,1.58115111178609,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.596861720015682,0.492422699235184,0.582961673259701,0,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0,0.627264888043406,0,0.404593039154462,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.583353565032143,0,0.675824501963113,0,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0,0,0,0,0,0.382576664137687,0,0 | ||
|short_description=p@chr3:129327349..129327353,+ | |short_description=p@chr3:129327349..129327353,+ | ||
}} | }} |
Revision as of 02:57, 14 November 2012
Short description: | p@chr3:129327349..129327353, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:129327349..129327353, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.47e-19 | 9 |
neuron | 4.12e-18 | 33 |
neuronal stem cell | 4.12e-18 | 33 |
neuroblast | 4.12e-18 | 33 |
electrically signaling cell | 4.12e-18 | 33 |
electrically responsive cell | 3.14e-17 | 39 |
electrically active cell | 3.14e-17 | 39 |
neural cell | 2.86e-13 | 43 |
ectodermal cell | 6.61e-13 | 44 |
neurectodermal cell | 6.61e-13 | 44 |
embryonic cell | 4.14e-11 | 70 |
neuron of the substantia nigra | 8.39e-11 | 3 |
somatic stem cell | 9.81e-08 | 91 |
multi fate stem cell | 9.81e-08 | 91 |
stem cell | 4.72e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.47e-19 | 9 |
peripheral nervous system | 1.18e-15 | 11 |
sympathetic nervous system | 1.25e-11 | 3 |
substantia nigra | 8.39e-11 | 3 |
telencephalic nucleus | 8.39e-11 | 3 |
midbrain nucleus | 8.39e-11 | 3 |
neural nucleus | 8.39e-11 | 3 |
nucleus of brain | 8.39e-11 | 3 |
gut-associated lymphoid tissue | 2.89e-08 | 2 |
mucosa-associated lymphoid tissue | 2.89e-08 | 2 |
lymphoid tissue | 2.89e-08 | 2 |
regional part of midbrain | 3.24e-08 | 4 |
midbrain | 3.24e-08 | 4 |
presumptive midbrain | 3.24e-08 | 4 |
midbrain neural tube | 3.24e-08 | 4 |
basal ganglion | 7.51e-07 | 8 |
nuclear complex of neuraxis | 7.51e-07 | 8 |
aggregate regional part of brain | 7.51e-07 | 8 |
collection of basal ganglia | 7.51e-07 | 8 |
cerebral subcortex | 7.51e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.