FFCP PHASE1:Mm9::chr7:114809700..114809718,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr7:114809700..114809718,+ | |id=chr7:114809700..114809718,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.62e-15,9;CL:0000217,7.08e-13,2;CL:0000328,7.08e-13,2;CL:0002573,7.08e-13,2;CL:0002376,7.08e-13,2;CL:0000218,7.08e-13,2;CL:0000692,7.08e-13,2;CL:0002377,7.08e-13,2;CL:0002375,7.08e-13,2;CL:0000215,7.12e-09,3;CL:0002319,2.06e-07,43;CL:0000221,3.18e-07,44;CL:0000133,3.18e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.43e-07!11 | |ontology_enrichment_uberon=UBERON:0000010!2.43e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.35e-24,11;UBERON:0000013,5.56e-17,3;UBERON:0002410,3.62e-15,9;UBERON:0001016,6.99e-13,75;UBERON:0001896,1.56e-12,2;UBERON:0002298,1.56e-12,2;UBERON:0005290,1.56e-12,2;UBERON:0010096,1.56e-12,2;UBERON:0004121,8.88e-10,95;UBERON:0000924,8.88e-10,95;UBERON:0006601,8.88e-10,95;UBERON:0001017,2.33e-09,73;UBERON:0004733,4.80e-09,6;UBERON:0004732,4.80e-09,6;UBERON:0002028,4.80e-09,6;UBERON:0007277,4.80e-09,6;UBERON:0000011,2.81e-08,3;UBERON:0003076,8.31e-08,12;UBERON:0003057,8.31e-08,12;UBERON:0002259,7.89e-07,1;UBERON:0002314,7.89e-07,1;UBERON:0004061,7.89e-07,1;UBERON:0006777,7.89e-07,1;UBERON:0005882,7.89e-07,1 | |||
|phase1_expression=0,0.348975407639361,0,0.60492842261366,0.500895729946347,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0.383062014255563,0.768032666281217,0,0,0,0.558365998002762,1.12552522006336,0.45839474333043,0,0,0.186399445825301,3.40767869999328,8.23730005163962,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.29688427812965,0,0.913396434936424,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0.127070227073065,1.19832511523858,0.915001205637253,0,0.869121600961382,0.767146371990992,1.24672826735736,0.486723789203273,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0.360124259610698,0,0.340182495756639,0.12811372028485,0.187403449119458,0.258703370739016,0,0.378212160335639,0,0,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,0.207125772535502,0,0.36012412292203,1.18372367792605,0.196764231747404,0.462801338662135,0.465067889500816,0.536546802799238,0.233530684734339,0.329119699826961,0.164167464079095,0,0.438599962275997,0.219550115291051,0.402619256281115,0.210289948564127,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0,0.257734922644187,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0,0.597423819763102,0,0,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,2.0871576698413,1.40654023910644,0,0,0.315508219416257,0,0.646270193198397,1.91175038362042,0.445597348164788,1.13230612315533,1.21443210502468,1.16902343164525,1.18586333383957,0.963963949265421,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0.304464949114599,0,0,0,0.65954501176592,0.645857706783622,0.482503399425247,0.119372344003136,0,0,2.03967832211561,0,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0.247960367176008,0.26175594198403,0,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0,0,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0,0.17230640686684,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.679020569229309,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0.348975407639361,0,0.60492842261366,0.500895729946347,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0.383062014255563,0.768032666281217,0,0,0,0.558365998002762,1.12552522006336,0.45839474333043,0,0,0.186399445825301,3.40767869999328,8.23730005163962,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.29688427812965,0,0.913396434936424,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0.127070227073065,1.19832511523858,0.915001205637253,0,0.869121600961382,0.767146371990992,1.24672826735736,0.486723789203273,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0.360124259610698,0,0.340182495756639,0.12811372028485,0.187403449119458,0.258703370739016,0,0.378212160335639,0,0,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,0.207125772535502,0,0.36012412292203,1.18372367792605,0.196764231747404,0.462801338662135,0.465067889500816,0.536546802799238,0.233530684734339,0.329119699826961,0.164167464079095,0,0.438599962275997,0.219550115291051,0.402619256281115,0.210289948564127,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0,0.257734922644187,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0,0.597423819763102,0,0,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,2.0871576698413,1.40654023910644,0,0,0.315508219416257,0,0.646270193198397,1.91175038362042,0.445597348164788,1.13230612315533,1.21443210502468,1.16902343164525,1.18586333383957,0.963963949265421,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0.304464949114599,0,0,0,0.65954501176592,0.645857706783622,0.482503399425247,0.119372344003136,0,0,2.03967832211561,0,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0.247960367176008,0.26175594198403,0,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0,0,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0,0.17230640686684,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.679020569229309,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr7:114809700..114809718,+ | |short_description=p@chr7:114809700..114809718,+ | ||
}} | }} |
Revision as of 06:53, 14 November 2012
Short description: | p@chr7:114809700..114809718, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:114809700..114809718, + |
Coexpression cluster: | MCL_coexpression_mm9:112 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.62e-15 | 9 |
insulating cell | 7.08e-13 | 2 |
myelin accumulating cell | 7.08e-13 | 2 |
Schwann cell | 7.08e-13 | 2 |
non-myelinating Schwann cell | 7.08e-13 | 2 |
myelinating Schwann cell;;Schwann cell | 7.08e-13 | 2 |
terminal Schwann cell | 7.08e-13 | 2 |
immature Schwann cell | 7.08e-13 | 2 |
Schwann cell precursor | 7.08e-13 | 2 |
barrier cell | 7.12e-09 | 3 |
neural cell | 2.06e-07 | 43 |
ectodermal cell | 3.18e-07 | 44 |
neurectodermal cell | 3.18e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.35e-24 | 11 |
sympathetic nervous system | 5.56e-17 | 3 |
autonomic nervous system | 3.62e-15 | 9 |
nervous system | 6.99e-13 | 75 |
medulla oblongata | 1.56e-12 | 2 |
brainstem | 1.56e-12 | 2 |
myelencephalon | 1.56e-12 | 2 |
future myelencephalon | 1.56e-12 | 2 |
ectoderm-derived structure | 8.88e-10 | 95 |
ectoderm | 8.88e-10 | 95 |
presumptive ectoderm | 8.88e-10 | 95 |
central nervous system | 2.33e-09 | 73 |
segmental subdivision of hindbrain | 4.80e-09 | 6 |
segmental subdivision of nervous system | 4.80e-09 | 6 |
hindbrain | 4.80e-09 | 6 |
presumptive hindbrain | 4.80e-09 | 6 |
parasympathetic nervous system | 2.81e-08 | 3 |
posterior neural tube | 8.31e-08 | 12 |
chordal neural plate | 8.31e-08 | 12 |
corpora quadrigemina | 7.89e-07 | 1 |
midbrain tectum | 7.89e-07 | 1 |
neural tube mantle layer | 7.89e-07 | 1 |
tectal plate | 7.89e-07 | 1 |
neural tube alar plate | 7.89e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.