Personal tools

FFCP PHASE1:Mm9::chr3:146163052..146163086,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr3:146163052..146163086,-
|id=chr3:146163052..146163086,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000838,1.28e-39,12;CL:0000791,3.18e-39,9;CL:0000789,3.18e-39,9;CL:0002420,3.18e-39,9;CL:0002419,3.18e-39,9;CL:0000790,3.18e-39,9;CL:0000542,1.40e-36,13;CL:0000051,1.40e-36,13;CL:0000084,3.91e-32,11;CL:0000827,3.91e-32,11;CL:0000624,1.09e-30,8;CL:0000738,5.43e-28,17;CL:0002087,5.43e-28,17;CL:0002031,9.58e-25,25;CL:0000988,2.60e-19,32;CL:0002032,2.60e-19,32;CL:0000037,2.60e-19,32;CL:0000837,2.60e-19,32;CL:0000893,3.50e-15,6;CL:0002489,3.50e-15,6;CL:0000898,3.50e-15,6;CL:0000809,3.50e-15,6;CL:0000810,3.50e-15,6;CL:0000895,3.50e-15,6;CL:0000808,3.50e-15,6;CL:0000894,3.50e-15,6;CL:0000806,3.50e-15,6;CL:0000807,3.50e-15,6;CL:0000805,3.50e-15,6;CL:0002425,3.50e-15,6;CL:0002436,3.50e-15,6;CL:0002427,3.50e-15,6;CL:0002428,3.50e-15,6;CL:0002429,3.50e-15,6;CL:0002433,3.50e-15,6;CL:0002431,3.50e-15,6;CL:0002432,3.50e-15,6;CL:0002320,2.21e-13,46;CL:0000134,2.21e-13,46;CL:0000625,1.83e-11,1;CL:0000219,2.30e-11,54;CL:0000815,2.90e-11,1;CL:0000792,2.90e-11,1;CL:0000945,1.12e-10,1;CL:0000236,1.12e-10,1;CL:0000826,1.12e-10,1
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.21e-13,46
|phase1_expression=0.960893082628764,0,0,0.90739263392049,0,0,0.233612640595526,3.48632973292256,0.563154888606667,1.40438715793196,0,0.239316476986009,1.02720437958723,3.14713448708391,0.333109761815663,0.202475267389826,0,0.630924330716475,0,1.27316895539409,0.595303031057488,0.198581902401771,0,0,0,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0.139986421625363,0,1.00669563634642,3.62681071005672,4.36921938885203,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.37863096666592,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.470354828542819,0,0.247194967734374,0.144599356919912,0,0.485300549842228,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0.359445373517761,0,0.254140454146129,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0.611036183101898,0,0.252722758433675,0,0.130120442962704,0,0,0,0.272145996605311,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,0.278047249225598,0.696504333044333,0.823128545631774,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.583826711835847,0,0.164167464079095,0.324275238183423,0.146199987425332,0.219550115291051,0.402619256281115,0,0.102904612379284,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.442655759869801,0.295220295959204,0,0,0,0,0.589676985339609,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0.335012514883631,0.714130922658041,0.585400943573396,0.630540576424764,0.44292937929755,0.159454768657487,0.655453258862952,0.345369963731791,0,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0.425820255624806,0,0,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0.18006109403131,0.258717367565509,0.214337035031592,0.709360934569094,0.178368817602071,0.164549020602121,0,0.23467170806371,0.63549621259146,0,0,0.322928853391811,0,0.238744688006273,0,0.291480836629851,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0,0.849892149969277,0.839708713941948,0.829199842826543,0,0,0.406638934253697,0.216010681643603,0,0.218362563746178,0.404593039154462,0.330613822901344,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.337912250981556,0.234714477291508,0,0.419437377702843,0.483168241652012,0,0.632022241256357,0.202725215290164,0,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0,0.302899349844443,0.533447646584999,0.201652370273681,0.194915761479505,0.577271049841977,0.701261413089414,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0.375364950902364,0,0.643105137237198,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.749132059759059,0.256100609619477,0.402048282689293,0.952587382566147,0.463537303779422,0.192909220463705,0,0.588795680537589,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0.338458431566706,0.365855945745545,0,0.543216455383447,0,0.237270036248348,0.394017929502254,0.818462086339379,0.154936841185966,0.385813221962283,0,0.467863216890817,0.214871054048298,0.765153328275374,0,0
|phase1_expression=0.960893082628764,0,0,0.90739263392049,0,0,0.233612640595526,3.48632973292256,0.563154888606667,1.40438715793196,0,0.239316476986009,1.02720437958723,3.14713448708391,0.333109761815663,0.202475267389826,0,0.630924330716475,0,1.27316895539409,0.595303031057488,0.198581902401771,0,0,0,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0.139986421625363,0,1.00669563634642,3.62681071005672,4.36921938885203,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.37863096666592,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.470354828542819,0,0.247194967734374,0.144599356919912,0,0.485300549842228,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0.359445373517761,0,0.254140454146129,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0.611036183101898,0,0.252722758433675,0,0.130120442962704,0,0,0,0.272145996605311,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,0.278047249225598,0.696504333044333,0.823128545631774,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.583826711835847,0,0.164167464079095,0.324275238183423,0.146199987425332,0.219550115291051,0.402619256281115,0,0.102904612379284,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.442655759869801,0.295220295959204,0,0,0,0,0.589676985339609,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0.335012514883631,0.714130922658041,0.585400943573396,0.630540576424764,0.44292937929755,0.159454768657487,0.655453258862952,0.345369963731791,0,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0.425820255624806,0,0,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0.18006109403131,0.258717367565509,0.214337035031592,0.709360934569094,0.178368817602071,0.164549020602121,0,0.23467170806371,0.63549621259146,0,0,0.322928853391811,0,0.238744688006273,0,0.291480836629851,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0,0.849892149969277,0.839708713941948,0.829199842826543,0,0,0.406638934253697,0.216010681643603,0,0.218362563746178,0.404593039154462,0.330613822901344,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.337912250981556,0.234714477291508,0,0.419437377702843,0.483168241652012,0,0.632022241256357,0.202725215290164,0,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0,0.302899349844443,0.533447646584999,0.201652370273681,0.194915761479505,0.577271049841977,0.701261413089414,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0.375364950902364,0,0.643105137237198,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.749132059759059,0.256100609619477,0.402048282689293,0.952587382566147,0.463537303779422,0.192909220463705,0,0.588795680537589,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0.338458431566706,0.365855945745545,0,0.543216455383447,0,0.237270036248348,0.394017929502254,0.818462086339379,0.154936841185966,0.385813221962283,0,0.467863216890817,0.214871054048298,0.765153328275374,0,0
|short_description=p3@Spata1
|short_description=p3@Spata1
}}
}}

Revision as of 10:47, 14 November 2012

Short description:p3@Spata1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Spata1_5end
Coexpression cluster:MCL_coexpression_mm9:21
Association with transcript: -335bp_to_ENSMUST00000029839, NM_027617, uc008rri.1_5end
EntrezGene:Spata1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Spata1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell1.28e-3912
mature alpha-beta T cell3.18e-399
alpha-beta T cell3.18e-399
immature T cell3.18e-399
mature T cell3.18e-399
immature alpha-beta T cell3.18e-399
lymphocyte1.40e-3613
common lymphoid progenitor1.40e-3613
T cell3.91e-3211
pro-T cell3.91e-3211
CD4-positive, alpha-beta T cell1.09e-308
leukocyte5.43e-2817
nongranular leukocyte5.43e-2817
hematopoietic lineage restricted progenitor cell9.58e-2525
hematopoietic cell2.60e-1932
hematopoietic oligopotent progenitor cell2.60e-1932
hematopoietic stem cell2.60e-1932
hematopoietic multipotent progenitor cell2.60e-1932
thymocyte3.50e-156
double negative thymocyte3.50e-156
naive T cell3.50e-156
double-positive, alpha-beta thymocyte3.50e-156
CD4-positive, alpha-beta thymocyte3.50e-156
naive thymus-derived CD4-positive, alpha-beta T cell3.50e-156
DN4 thymocyte3.50e-156
DN1 thymic pro-T cell3.50e-156
DN2 thymocyte3.50e-156
DN3 thymocyte3.50e-156
immature single positive thymocyte3.50e-156
early T lineage precursor3.50e-156
mature CD4 single-positive thymocyte3.50e-156
resting double-positive thymocyte3.50e-156
double-positive blast3.50e-156
CD69-positive double-positive thymocyte3.50e-156
CD69-positive, CD4-positive single-positive thymocyte3.50e-156
CD4-positive, CD8-intermediate double-positive thymocyte3.50e-156
CD24-positive, CD4 single-positive thymocyte3.50e-156
connective tissue cell2.21e-1346
mesenchymal cell2.21e-1346
CD8-positive, alpha-beta T cell1.83e-111
motile cell2.30e-1154
regulatory T cell2.90e-111
CD4-positive, CD25-positive, alpha-beta regulatory T cell2.90e-111
lymphocyte of B lineage1.12e-101
B cell1.12e-101
pro-B cell1.12e-101

Uber anatomy
Ontology termp-valuen
connective tissue2.21e-1346







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:146163052..146163086,-&oldid=2314964"