FFCP PHASE1:Mm9::chr1:87497225..87497236,+: Difference between revisions
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|id=chr1:87497225..87497236,+ | |id=chr1:87497225..87497236,+ | ||
|ontology_enrichment_celltype=CL:0000988!6.96e-18!32;CL:0002032!6.96e-18!32;CL:0000037!6.96e-18!32;CL:0000566!6.96e-18!32;CL:0000837!6.96e-18!32;CL:0002031!1.98e-17!25;CL:0002320!1.33e-11!46;CL:0000134!1.33e-11!46;CL:0000738!2.72e-11!17;CL:0002087!2.72e-11!17;CL:0000063!3.15e-11!66;CL:0000049!2.06e-10!19;CL:0000553!5.87e-10!6;CL:0000556!5.87e-10!6;CL:0000219!1.77e-09!54;CL:0000838!2.44e-09!12;CL:0000839!2.48e-09!13;CL:0000144!3.51e-09!121;CL:0000012!3.51e-09!121;CL:0000034!9.18e-09!97;CL:0000542!1.41e-08!13;CL:0000051!1.41e-08!13;CL:0002371!1.72e-07!118;CL:0000763!1.85e-07!16;CL:0000723!2.19e-07!91;CL:0000048!2.19e-07!91;CL:0000084!4.66e-07!11;CL:0000827!4.66e-07!11 | |ontology_enrichment_celltype=CL:0000988!6.96e-18!32;CL:0002032!6.96e-18!32;CL:0000037!6.96e-18!32;CL:0000566!6.96e-18!32;CL:0000837!6.96e-18!32;CL:0002031!1.98e-17!25;CL:0002320!1.33e-11!46;CL:0000134!1.33e-11!46;CL:0000738!2.72e-11!17;CL:0002087!2.72e-11!17;CL:0000063!3.15e-11!66;CL:0000049!2.06e-10!19;CL:0000553!5.87e-10!6;CL:0000556!5.87e-10!6;CL:0000219!1.77e-09!54;CL:0000838!2.44e-09!12;CL:0000839!2.48e-09!13;CL:0000144!3.51e-09!121;CL:0000012!3.51e-09!121;CL:0000034!9.18e-09!97;CL:0000542!1.41e-08!13;CL:0000051!1.41e-08!13;CL:0002371!1.72e-07!118;CL:0000763!1.85e-07!16;CL:0000723!2.19e-07!91;CL:0000048!2.19e-07!91;CL:0000084!4.66e-07!11;CL:0000827!4.66e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.41e-17,6;CL:0000556,1.41e-17,6;CL:0000839,2.46e-12,13;CL:0002031,5.20e-12,25;CL:0000050,8.23e-12,9;CL:0000763,5.17e-10,16;CL:0000988,2.93e-09,32;CL:0002032,2.93e-09,32;CL:0000037,2.93e-09,32;CL:0000837,2.93e-09,32;CL:0000049,2.03e-08,19;CL:0000945,4.65e-08,1;CL:0000236,4.65e-08,1;CL:0000826,4.65e-08,1;CL:0000355,9.95e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.71e-11!3;DOID:4045!4.71e-11!3 | |ontology_enrichment_disease=DOID:0060100!4.71e-11!3;DOID:4045!4.71e-11!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.72e-19,3;DOID:4045,4.72e-19,3;DOID:0050686,7.79e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.33e-11!46;UBERON:0001962!8.45e-08!2;UBERON:0001961!8.45e-08!2;UBERON:0001744!8.45e-08!2;UBERON:0002204!1.84e-07!32;UBERON:0002371!1.85e-07!16 | |ontology_enrichment_uberon=UBERON:0002384!1.33e-11!46;UBERON:0001962!8.45e-08!2;UBERON:0001961!8.45e-08!2;UBERON:0001744!8.45e-08!2;UBERON:0002204!1.84e-07!32;UBERON:0002371!1.85e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.59e-12,32;UBERON:0002371,5.17e-10,16;UBERON:0003199,1.53e-07,1;UBERON:0001474,2.96e-07,22;UBERON:0004765,2.96e-07,22;UBERON:0001434,2.96e-07,22;UBERON:0001134,9.95e-07,9;UBERON:0002036,9.95e-07,9;UBERON:0002385,9.95e-07,9;UBERON:0000486,9.95e-07,9;UBERON:0007503,9.95e-07,9;UBERON:0001015,9.95e-07,9;UBERON:0002329,9.95e-07,9;UBERON:0003082,9.95e-07,9;UBERON:0003059,9.95e-07,9;UBERON:0007282,9.95e-07,9;UBERON:0004290,9.95e-07,9;UBERON:0009618,9.95e-07,9 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0.645616617207881,0,0,0.171217968225505,0,0.171200729931206,0.437102012094987,0,2.02475267389826,0,5.8360500591274,4.11343300817216,1.69755860719212,0,0,1.04479915655574,0.95995453676044,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,2.3440060335714,1.0470474879476,2.35292595212406,1.36609096991689,2.42755176515577,0,0,0,0,0,0,0,0,0,8.22134769682908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0.645616617207881,0,0,0.171217968225505,0,0.171200729931206,0.437102012094987,0,2.02475267389826,0,5.8360500591274,4.11343300817216,1.69755860719212,0,0,1.04479915655574,0.95995453676044,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,2.3440060335714,1.0470474879476,2.35292595212406,1.36609096991689,2.42755176515577,0,0,0,0,0,0,0,0,0,8.22134769682908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Gm2427,p6@Sp140 | |short_description=p6@Gm2427,p6@Sp140 | ||
}} | }} |
Revision as of 22:48, 14 November 2012
Short description: | p6@Gm2427, p6@Sp140 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gm2427_5end, CAGE_peak_6_at_Sp140_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | -41bp_to_ENSMUST00000080204, NM_001013817, uc007buc.1_5end |
EntrezGene: | 100039794,434484 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.41e-17 | 6 |
megakaryocyte | 1.41e-17 | 6 |
myeloid lineage restricted progenitor cell | 2.46e-12 | 13 |
hematopoietic lineage restricted progenitor cell | 5.20e-12 | 25 |
megakaryocyte-erythroid progenitor cell | 8.23e-12 | 9 |
myeloid cell | 5.17e-10 | 16 |
hematopoietic cell | 2.93e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.93e-09 | 32 |
hematopoietic stem cell | 2.93e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.93e-09 | 32 |
common myeloid progenitor | 2.03e-08 | 19 |
lymphocyte of B lineage | 4.65e-08 | 1 |
B cell | 4.65e-08 | 1 |
pro-B cell | 4.65e-08 | 1 |
multi-potent skeletal muscle stem cell | 9.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.59e-12 | 32 |
bone marrow | 5.17e-10 | 16 |
egg chamber | 1.53e-07 | 1 |
bone element | 2.96e-07 | 22 |
skeletal element | 2.96e-07 | 22 |
skeletal system | 2.96e-07 | 22 |
skeletal muscle tissue | 9.95e-07 | 9 |
striated muscle tissue | 9.95e-07 | 9 |
muscle tissue | 9.95e-07 | 9 |
multilaminar epithelium | 9.95e-07 | 9 |
epithelial vesicle | 9.95e-07 | 9 |
musculature | 9.95e-07 | 9 |
somite | 9.95e-07 | 9 |
myotome | 9.95e-07 | 9 |
presomitic mesoderm | 9.95e-07 | 9 |
presumptive segmental plate | 9.95e-07 | 9 |
dermomyotome | 9.95e-07 | 9 |
trunk paraxial mesoderm | 9.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.72e-19 | 3 |
muscle cancer | 4.72e-19 | 3 |
organ system cancer | 7.79e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.