FFCP PHASE1:Hg19::chr6:105388488..105388535,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!6.17e-13!5;CL:0000047!2.26e-10!8;CL:0000540!5.76e-10!6;CL:0000031!5.76e-10!6;CL:0000404!5.76e-10!6;CL:0002319!1.26e-09!25;CL:0002541!3.37e-07!3;CL:0000147!6.94e-07!14;CL:0002586!8.74e-07!3;CL:0000133!9.22e-07!59 | |ontology_enrichment_celltype=CL:0002322!6.17e-13!5;CL:0000047!2.26e-10!8;CL:0000540!5.76e-10!6;CL:0000031!5.76e-10!6;CL:0000404!5.76e-10!6;CL:0002319!1.26e-09!25;CL:0002541!3.37e-07!3;CL:0000147!6.94e-07!14;CL:0002586!8.74e-07!3;CL:0000133!9.22e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.11e-32;5!CL:0002321;4.00e-20;15!CL:0000540;1.45e-17;6!CL:0000404;1.45e-17;6!CL:0002319;6.70e-14;25!CL:0000123;1.69e-13;2!CL:0000242;1.69e-13;2!CL:0000039;1.39e-08;7!CL:0000586;1.39e-08;7 | |ontology_enrichment_celltype_v019=CL:0002322;1.11e-32;5!CL:0002321;4.00e-20;15!CL:0000540;1.45e-17;6!CL:0000404;1.45e-17;6!CL:0002319;6.70e-14;25!CL:0000123;1.69e-13;2!CL:0000242;1.69e-13;2!CL:0000039;1.39e-08;7!CL:0000586;1.39e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.01e-32,5;CL:0000047,5.89e-20,8;CL:0000540,1.33e-17,6;CL:0000031,1.33e-17,6;CL:0000404,1.33e-17,6;CL:0000133,5.56e-15,59;CL:0002319,6.24e-14,25;CL:0000242,1.64e-13,2;CL:0000221,6.65e-12,72;CL:0000039,1.49e-08,7;CL:0000586,1.49e-08,7;CL:0000333,3.13e-08,41 | |||
|ontology_enrichment_development_v019=CL:0000031;1.45e-17;6!UBERON:0009117;3.69e-10;10!UBERON:0005564;3.69e-10;10!CL:0000133;2.19e-08;59 | |ontology_enrichment_development_v019=CL:0000031;1.45e-17;6!UBERON:0009117;3.69e-10;10!UBERON:0005564;3.69e-10;10!CL:0000133;2.19e-08;59 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;1.35e-09;22!DOID:2994;1.35e-09;22 | |ontology_enrichment_disease_v019=DOID:3095;1.35e-09;22!DOID:2994;1.35e-09;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.44e-09,22;DOID:2994,1.44e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.96e-56!86;UBERON:0000073!1.48e-54!94;UBERON:0001016!1.48e-54!94;UBERON:0001017!3.29e-50!82;UBERON:0001049!1.14e-46!57;UBERON:0005068!1.14e-46!57;UBERON:0006241!1.14e-46!57;UBERON:0007135!1.14e-46!57;UBERON:0000955!1.07e-40!69;UBERON:0006238!1.07e-40!69;UBERON:0002616!7.92e-40!59;UBERON:0003075!3.33e-38!86;UBERON:0007284!3.33e-38!86;UBERON:0002780!1.44e-37!41;UBERON:0001890!1.44e-37!41;UBERON:0006240!1.44e-37!41;UBERON:0003080!1.75e-36!42;UBERON:0002346!6.03e-36!90;UBERON:0003056!1.80e-34!61;UBERON:0002619!2.76e-32!22;UBERON:0002020!3.10e-31!34;UBERON:0003528!3.10e-31!34;UBERON:0001893!4.27e-31!34;UBERON:0001869!8.24e-31!32;UBERON:0002791!1.70e-29!33;UBERON:0004121!5.03e-29!169;UBERON:0001950!1.78e-28!20;UBERON:0000924!5.36e-28!173;UBERON:0006601!5.36e-28!173;UBERON:0000956!6.94e-28!25;UBERON:0000203!6.94e-28!25;UBERON:0000033!2.46e-25!123;UBERON:0000153!1.42e-23!129;UBERON:0007811!1.42e-23!129;UBERON:0007023!1.91e-19!115;UBERON:0003076!4.30e-11!15;UBERON:0003057!4.30e-11!15;UBERON:0000349!5.84e-11!5;UBERON:0001872!6.50e-11!5;UBERON:0000966!1.23e-10!5;UBERON:0005388!1.23e-10!5;UBERON:0001802!1.23e-10!5;UBERON:0000473!4.70e-10!8;UBERON:0000025!8.06e-10!194;UBERON:0001871!3.90e-09!7;UBERON:0004733!4.42e-09!12;UBERON:0002028!4.42e-09!12;UBERON:0007277!4.42e-09!12;UBERON:0000200!1.08e-08!6;UBERON:0000064!1.84e-08!219;UBERON:0004732!2.78e-08!13;UBERON:0001894!8.37e-08!7;UBERON:0006222!8.37e-08!7;UBERON:0002680!2.26e-07!9;UBERON:0001895!2.26e-07!9;UBERON:0010092!2.26e-07!9;UBERON:0000476!3.37e-07!3;UBERON:0000920!3.37e-07!3;UBERON:0003135!4.52e-07!11;UBERON:0002021!5.55e-07!5;UBERON:0001781!8.74e-07!3;UBERON:0001782!8.74e-07!3;UBERON:0005424!8.74e-07!3;UBERON:0000988!8.92e-07!3 | |ontology_enrichment_uberon=UBERON:0005743!1.96e-56!86;UBERON:0000073!1.48e-54!94;UBERON:0001016!1.48e-54!94;UBERON:0001017!3.29e-50!82;UBERON:0001049!1.14e-46!57;UBERON:0005068!1.14e-46!57;UBERON:0006241!1.14e-46!57;UBERON:0007135!1.14e-46!57;UBERON:0000955!1.07e-40!69;UBERON:0006238!1.07e-40!69;UBERON:0002616!7.92e-40!59;UBERON:0003075!3.33e-38!86;UBERON:0007284!3.33e-38!86;UBERON:0002780!1.44e-37!41;UBERON:0001890!1.44e-37!41;UBERON:0006240!1.44e-37!41;UBERON:0003080!1.75e-36!42;UBERON:0002346!6.03e-36!90;UBERON:0003056!1.80e-34!61;UBERON:0002619!2.76e-32!22;UBERON:0002020!3.10e-31!34;UBERON:0003528!3.10e-31!34;UBERON:0001893!4.27e-31!34;UBERON:0001869!8.24e-31!32;UBERON:0002791!1.70e-29!33;UBERON:0004121!5.03e-29!169;UBERON:0001950!1.78e-28!20;UBERON:0000924!5.36e-28!173;UBERON:0006601!5.36e-28!173;UBERON:0000956!6.94e-28!25;UBERON:0000203!6.94e-28!25;UBERON:0000033!2.46e-25!123;UBERON:0000153!1.42e-23!129;UBERON:0007811!1.42e-23!129;UBERON:0007023!1.91e-19!115;UBERON:0003076!4.30e-11!15;UBERON:0003057!4.30e-11!15;UBERON:0000349!5.84e-11!5;UBERON:0001872!6.50e-11!5;UBERON:0000966!1.23e-10!5;UBERON:0005388!1.23e-10!5;UBERON:0001802!1.23e-10!5;UBERON:0000473!4.70e-10!8;UBERON:0000025!8.06e-10!194;UBERON:0001871!3.90e-09!7;UBERON:0004733!4.42e-09!12;UBERON:0002028!4.42e-09!12;UBERON:0007277!4.42e-09!12;UBERON:0000200!1.08e-08!6;UBERON:0000064!1.84e-08!219;UBERON:0004732!2.78e-08!13;UBERON:0001894!8.37e-08!7;UBERON:0006222!8.37e-08!7;UBERON:0002680!2.26e-07!9;UBERON:0001895!2.26e-07!9;UBERON:0010092!2.26e-07!9;UBERON:0000476!3.37e-07!3;UBERON:0000920!3.37e-07!3;UBERON:0003135!4.52e-07!11;UBERON:0002021!5.55e-07!5;UBERON:0001781!8.74e-07!3;UBERON:0001782!8.74e-07!3;UBERON:0005424!8.74e-07!3;UBERON:0000988!8.92e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.12e-13;2!UBERON:0002757;1.12e-13;2!UBERON:0010134;1.12e-13;2!UBERON:0005408;1.12e-13;2!UBERON:0001899;1.12e-13;2!UBERON:0000473;1.16e-12;8!UBERON:0003135;3.01e-09;11!UBERON:0003296;2.89e-07;4!UBERON:0010133;2.89e-07;4!UBERON:0002784;2.89e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.12e-13;2!UBERON:0002757;1.12e-13;2!UBERON:0010134;1.12e-13;2!UBERON:0005408;1.12e-13;2!UBERON:0001899;1.12e-13;2!UBERON:0000473;1.16e-12;8!UBERON:0003135;3.01e-09;11!UBERON:0003296;2.89e-07;4!UBERON:0010133;2.89e-07;4!UBERON:0002784;2.89e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.12e-13,2;UBERON:0002757,1.12e-13,2;UBERON:0010134,1.12e-13,2;UBERON:0005408,1.12e-13,2;UBERON:0001899,1.12e-13,2;UBERON:0000473,1.27e-12,8;UBERON:0003135,3.22e-09,11;UBERON:0003296,2.89e-07,4;UBERON:0010133,2.89e-07,4;UBERON:0002784,2.89e-07,4 | |||
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| ||
|short_description=p@chr6:105388488..105388535,+ | |short_description=p@chr6:105388488..105388535,+ | ||
}} | }} |
Revision as of 02:49, 18 November 2012
Short description: | p@chr6:105388488..105388535, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:105388488..105388535, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.01e-32 | 5 |
neuronal stem cell | 5.89e-20 | 8 |
neuron | 1.33e-17 | 6 |
neuroblast | 1.33e-17 | 6 |
electrically signaling cell | 1.33e-17 | 6 |
neurectodermal cell | 5.56e-15 | 59 |
neural cell | 6.24e-14 | 25 |
Merkel cell | 1.64e-13 | 2 |
ectodermal cell | 6.65e-12 | 72 |
germ line cell | 1.49e-08 | 7 |
germ cell | 1.49e-08 | 7 |
migratory neural crest cell | 3.13e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.12e-13 | 2 |
regional part of epithalamus | 1.12e-13 | 2 |
secretory circumventricular organ | 1.12e-13 | 2 |
circumventricular organ | 1.12e-13 | 2 |
epithalamus | 1.12e-13 | 2 |
testis | 1.27e-12 | 8 |
male reproductive organ | 3.22e-09 | 11 |
gland of diencephalon | 2.89e-07 | 4 |
neuroendocrine gland | 2.89e-07 | 4 |
regional part of diencephalon | 2.89e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.44e-09 | 22 |
germ cell cancer | 1.44e-09 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.