FFCP PHASE1:Hg19::chr4:75253731..75253744,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!4.17e-45!42;CL:0000860!2.41e-41!45;CL:0002009!2.15e-32!65;CL:0002194!6.83e-32!63;CL:0000576!6.83e-32!63;CL:0000040!6.83e-32!63;CL:0000559!6.83e-32!63;CL:0000557!1.10e-28!71;CL:0000766!6.59e-28!76;CL:0000839!1.40e-27!70;CL:0000763!1.67e-19!112;CL:0000049!1.67e-19!112;CL:0002087!1.30e-16!119;CL:0000738!4.67e-15!140;CL:0002031!2.34e-14!124;CL:0000037!3.93e-12!172;CL:0000566!3.93e-12!172;CL:0002032!1.50e-11!165;CL:0000837!1.50e-11!165;CL:0000988!8.77e-11!182;CL:0000063!1.02e-10!578;CL:0000012!5.72e-08!682;CL:0000134!7.56e-08!358;CL:0002320!8.34e-08!365;CL:0000548!1.50e-07!679;CL:0000004!1.50e-07!679;CL:0000255!1.50e-07!679 | |ontology_enrichment_celltype=CL:0002057!4.17e-45!42;CL:0000860!2.41e-41!45;CL:0002009!2.15e-32!65;CL:0002194!6.83e-32!63;CL:0000576!6.83e-32!63;CL:0000040!6.83e-32!63;CL:0000559!6.83e-32!63;CL:0000557!1.10e-28!71;CL:0000766!6.59e-28!76;CL:0000839!1.40e-27!70;CL:0000763!1.67e-19!112;CL:0000049!1.67e-19!112;CL:0002087!1.30e-16!119;CL:0000738!4.67e-15!140;CL:0002031!2.34e-14!124;CL:0000037!3.93e-12!172;CL:0000566!3.93e-12!172;CL:0002032!1.50e-11!165;CL:0000837!1.50e-11!165;CL:0000988!8.77e-11!182;CL:0000063!1.02e-10!578;CL:0000012!5.72e-08!682;CL:0000134!7.56e-08!358;CL:0002320!8.34e-08!365;CL:0000548!1.50e-07!679;CL:0000004!1.50e-07!679;CL:0000255!1.50e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.63e-69;33!CL:0002057;7.63e-69;33!CL:0000473;3.06e-58;39!CL:0000234;3.06e-58;39!CL:0000576;2.16e-42;48!CL:0000766;7.71e-36;69!CL:0000763;1.44e-14;100!CL:0002087;1.98e-13;104!CL:0002393;2.52e-11;6!CL:0002397;2.52e-11;6!CL:0000738;5.84e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;7.63e-69;33!CL:0002057;7.63e-69;33!CL:0000473;3.06e-58;39!CL:0000234;3.06e-58;39!CL:0000576;2.16e-42;48!CL:0000766;7.71e-36;69!CL:0000763;1.44e-14;100!CL:0002087;1.98e-13;104!CL:0002393;2.52e-11;6!CL:0002397;2.52e-11;6!CL:0000738;5.84e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.02e-82,48;CL:0000234,5.02e-82,48;CL:0000860,5.31e-79,42;CL:0002057,5.31e-79,42;CL:0002194,1.61e-70,59;CL:0000576,1.61e-70,59;CL:0000040,1.61e-70,59;CL:0000559,1.61e-70,59;CL:0002009,4.11e-68,61;CL:0000839,1.00e-62,66;CL:0000557,9.60e-62,67;CL:0000766,3.10e-57,72;CL:0000763,5.83e-37,108;CL:0000049,5.83e-37,108;CL:0002087,1.78e-34,115;CL:0002031,7.07e-33,120;CL:0000738,1.53e-28,136;CL:0002032,1.78e-23,161;CL:0000837,1.78e-23,161;CL:0000037,2.53e-22,168;CL:0000988,5.63e-21,177;CL:0000134,2.92e-09,354;CL:0002320,5.42e-09,361;CL:0000219,4.83e-08,386;CL:0002393,1.13e-07,9;CL:0002397,1.13e-07,9;CL:0000048,7.06e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;6.76e-58;42!CL:0000049;2.35e-09;108 | |ontology_enrichment_development_v019=CL:0002057;6.76e-58;42!CL:0000049;2.35e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;2.74e-08;1!DOID:3165;2.74e-08;1!DOID:0060121;2.74e-08;1!DOID:2438;2.74e-08;1!DOID:4418;2.74e-08;1 | |ontology_enrichment_disease_v019=DOID:0060085;2.74e-08;1!DOID:3165;2.74e-08;1!DOID:0060121;2.74e-08;1!DOID:2438;2.74e-08;1!DOID:4418;2.74e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.46e-08,1;DOID:3165,2.46e-08,1;DOID:0060121,2.46e-08,1;DOID:2438,2.46e-08,1;DOID:4418,2.46e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.58e-24!80;UBERON:0001474!1.06e-21!86;UBERON:0004765!4.16e-19!101;UBERON:0001434!4.16e-19!101;UBERON:0002390!5.40e-19!102;UBERON:0003061!5.40e-19!102;UBERON:0002193!2.83e-16!112;UBERON:0002405!2.19e-14!115;UBERON:0002204!8.93e-10!167;UBERON:0002384!3.64e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!3.58e-24!80;UBERON:0001474!1.06e-21!86;UBERON:0004765!4.16e-19!101;UBERON:0001434!4.16e-19!101;UBERON:0002390!5.40e-19!102;UBERON:0003061!5.40e-19!102;UBERON:0002193!2.83e-16!112;UBERON:0002405!2.19e-14!115;UBERON:0002204!8.93e-10!167;UBERON:0002384!3.64e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.76e-54,76;UBERON:0001474,7.64e-50,82;UBERON:0004765,4.25e-45,90;UBERON:0002405,1.59e-43,93;UBERON:0002390,4.07e-41,98;UBERON:0003061,4.07e-41,98;UBERON:0001434,3.21e-40,100;UBERON:0002193,5.83e-37,108;UBERON:0002204,1.75e-22,167;UBERON:0003081,9.55e-18,203;UBERON:0000926,7.14e-10,315;UBERON:0004120,7.14e-10,315;UBERON:0006603,7.14e-10,315;UBERON:0002384,1.26e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,1.10799081706375,2.60707781711184,3.47217393145363,0,0,0,0.290796477559129,0.377875943688809,0,0.929716147622738,1.23350366406548,2.16794459626573,1.43846196161075,1.5369642391746,0.945928919554341,6.89491361473237,3.87290810150296,2.70852973188684,1.50593871634084,1.09162460023138,0.898893937780338,11.3251040177234,2.88836124368484,8.95071976118658,0,0.199463657621632,0,11.3181603065148,5.6738522469114,11.8336227309159,0.251248665256743,1.0429658368404,0.434377689410233,8.47559303686716,3.31449872388808,6.96217252369946,0,0.212604299965044,0,0,0.450530678524519,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538842688278752,0,0,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.532685175939381,0.0821271560138091,0.519254429183621,0.232420756919918,0,0.200506470303285,0.828728900423067,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0.95497793895076,0,0.614321404198464,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,1.39100228192093,0,0,0,0,0,0,0.229073192331831,0,1.1524383839052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462102664601353,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.320965466756673,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0.179650404213174,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,1.10799081706375,2.60707781711184,3.47217393145363,0,0,0,0.290796477559129,0.377875943688809,0,0.929716147622738,1.23350366406548,2.16794459626573,1.43846196161075,1.5369642391746,0.945928919554341,6.89491361473237,3.87290810150296,2.70852973188684,1.50593871634084,1.09162460023138,0.898893937780338,11.3251040177234,2.88836124368484,8.95071976118658,0,0.199463657621632,0,11.3181603065148,5.6738522469114,11.8336227309159,0.251248665256743,1.0429658368404,0.434377689410233,8.47559303686716,3.31449872388808,6.96217252369946,0,0.212604299965044,0,0,0.450530678524519,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538842688278752,0,0,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.532685175939381,0.0821271560138091,0.519254429183621,0.232420756919918,0,0.200506470303285,0.828728900423067,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0.95497793895076,0,0.614321404198464,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,1.39100228192093,0,0,0,0,0,0,0.229073192331831,0,1.1524383839052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462102664601353,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.320965466756673,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr4:75253731..75253744,+ | |short_description=p@chr4:75253731..75253744,+ | ||
}} | }} |
Revision as of 06:29, 18 November 2012
Short description: | p@chr4:75253731..75253744, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:75253731..75253744, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.02e-82 | 48 |
phagocyte | 5.02e-82 | 48 |
classical monocyte | 5.31e-79 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.31e-79 | 42 |
monopoietic cell | 1.61e-70 | 59 |
monocyte | 1.61e-70 | 59 |
monoblast | 1.61e-70 | 59 |
promonocyte | 1.61e-70 | 59 |
macrophage dendritic cell progenitor | 4.11e-68 | 61 |
myeloid lineage restricted progenitor cell | 1.00e-62 | 66 |
granulocyte monocyte progenitor cell | 9.60e-62 | 67 |
myeloid leukocyte | 3.10e-57 | 72 |
myeloid cell | 5.83e-37 | 108 |
common myeloid progenitor | 5.83e-37 | 108 |
nongranular leukocyte | 1.78e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 7.07e-33 | 120 |
leukocyte | 1.53e-28 | 136 |
hematopoietic oligopotent progenitor cell | 1.78e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-23 | 161 |
hematopoietic stem cell | 2.53e-22 | 168 |
hematopoietic cell | 5.63e-21 | 177 |
mesenchymal cell | 2.92e-09 | 354 |
connective tissue cell | 5.42e-09 | 361 |
motile cell | 4.83e-08 | 386 |
intermediate monocyte | 1.13e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.13e-07 | 9 |
multi fate stem cell | 7.06e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.76e-54 | 76 |
bone element | 7.64e-50 | 82 |
skeletal element | 4.25e-45 | 90 |
immune system | 1.59e-43 | 93 |
hematopoietic system | 4.07e-41 | 98 |
blood island | 4.07e-41 | 98 |
skeletal system | 3.21e-40 | 100 |
hemolymphoid system | 5.83e-37 | 108 |
musculoskeletal system | 1.75e-22 | 167 |
lateral plate mesoderm | 9.55e-18 | 203 |
mesoderm | 7.14e-10 | 315 |
mesoderm-derived structure | 7.14e-10 | 315 |
presumptive mesoderm | 7.14e-10 | 315 |
connective tissue | 1.26e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.46e-08 | 1 |
skin benign neoplasm | 2.46e-08 | 1 |
integumentary system benign neoplasm | 2.46e-08 | 1 |
dermis tumor | 2.46e-08 | 1 |
cutaneous fibrous histiocytoma | 2.46e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.