FFCP PHASE1:Hg19::chr3:124606502..124606537,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002321!8.77e-15!248;CL:0000222!2.88e-14!119;CL:0000220!5.47e-14!246;CL:0000055!8.73e-13!180;CL:0002078!3.58e-09!44;CL:0000066!6.21e-09!254;CL:0000183!6.96e-09!59;CL:0000393!1.34e-07!60;CL:0000211!1.34e-07!60;CL:0000680!1.81e-07!57;CL:0000056!1.81e-07!57;CL:0000355!1.81e-07!57;CL:0000187!3.02e-07!54;CL:0000115!3.27e-07!35;CL:0000213!7.90e-07!57;CL:0000215!7.90e-07!57;CL:0000325!9.77e-07!39 | |ontology_enrichment_celltype=CL:0002321!8.77e-15!248;CL:0000222!2.88e-14!119;CL:0000220!5.47e-14!246;CL:0000055!8.73e-13!180;CL:0002078!3.58e-09!44;CL:0000066!6.21e-09!254;CL:0000183!6.96e-09!59;CL:0000393!1.34e-07!60;CL:0000211!1.34e-07!60;CL:0000680!1.81e-07!57;CL:0000056!1.81e-07!57;CL:0000355!1.81e-07!57;CL:0000187!3.02e-07!54;CL:0000115!3.27e-07!35;CL:0000213!7.90e-07!57;CL:0000215!7.90e-07!57;CL:0000325!9.77e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:1000746;6.50e-07;7!CL:1000612;6.50e-07;7 | |ontology_enrichment_celltype_v019=CL:1000746;6.50e-07;7!CL:1000612;6.50e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.13e-11,121;CL:0002321,8.07e-10,250;CL:0002078,2.41e-08,45;CL:0000393,6.85e-08,61;CL:0000211,6.85e-08,61;CL:0000680,6.39e-07,58;CL:0000056,6.39e-07,58;CL:0000355,6.39e-07,58;CL:0000187,6.41e-07,55;CL:1000746,7.08e-07,7;CL:1000612,7.08e-07,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.72e-18!312;UBERON:0000483!1.07e-17!309;UBERON:0000468!3.71e-16!659;UBERON:0000475!7.17e-14!365;UBERON:0003914!4.90e-13!118;UBERON:0000025!1.02e-11!194;UBERON:0000922!1.20e-11!612;UBERON:0000467!1.69e-11!625;UBERON:0000480!1.96e-11!626;UBERON:0002100!3.01e-11!216;UBERON:0002049!1.02e-10!79;UBERON:0007798!1.02e-10!79;UBERON:0004872!1.51e-10!84;UBERON:0000481!2.24e-10!347;UBERON:0000490!2.73e-10!138;UBERON:0000477!1.54e-09!286;UBERON:0002050!1.74e-09!605;UBERON:0005423!1.74e-09!605;UBERON:0005256!1.91e-09!143;UBERON:0000923!2.03e-09!604;UBERON:0005291!2.03e-09!604;UBERON:0006598!2.03e-09!604;UBERON:0002532!2.03e-09!604;UBERON:0001981!2.03e-09!60;UBERON:0007500!2.03e-09!60;UBERON:0004537!2.03e-09!60;UBERON:0006965!2.03e-09!60;UBERON:0003104!6.41e-09!238;UBERON:0009142!6.41e-09!238;UBERON:0000064!7.11e-09!219;UBERON:0000055!7.57e-09!69;UBERON:0004111!9.41e-09!241;UBERON:0003886!3.20e-08!63;UBERON:0000464!3.83e-08!104;UBERON:0000466!6.75e-08!126;UBERON:0009569!2.40e-07!113;UBERON:0000353!2.79e-07!17;UBERON:0004876!4.09e-07!20;UBERON:0002385!4.15e-07!63;UBERON:0001015!4.15e-07!63;UBERON:0000383!4.15e-07!63;UBERON:0001048!4.74e-07!168;UBERON:0001134!5.18e-07!61;UBERON:0002036!5.18e-07!61;UBERON:0003082!5.18e-07!61;UBERON:0002553!5.95e-07!70 | |ontology_enrichment_uberon=UBERON:0000119!1.72e-18!312;UBERON:0000483!1.07e-17!309;UBERON:0000468!3.71e-16!659;UBERON:0000475!7.17e-14!365;UBERON:0003914!4.90e-13!118;UBERON:0000025!1.02e-11!194;UBERON:0000922!1.20e-11!612;UBERON:0000467!1.69e-11!625;UBERON:0000480!1.96e-11!626;UBERON:0002100!3.01e-11!216;UBERON:0002049!1.02e-10!79;UBERON:0007798!1.02e-10!79;UBERON:0004872!1.51e-10!84;UBERON:0000481!2.24e-10!347;UBERON:0000490!2.73e-10!138;UBERON:0000477!1.54e-09!286;UBERON:0002050!1.74e-09!605;UBERON:0005423!1.74e-09!605;UBERON:0005256!1.91e-09!143;UBERON:0000923!2.03e-09!604;UBERON:0005291!2.03e-09!604;UBERON:0006598!2.03e-09!604;UBERON:0002532!2.03e-09!604;UBERON:0001981!2.03e-09!60;UBERON:0007500!2.03e-09!60;UBERON:0004537!2.03e-09!60;UBERON:0006965!2.03e-09!60;UBERON:0003104!6.41e-09!238;UBERON:0009142!6.41e-09!238;UBERON:0000064!7.11e-09!219;UBERON:0000055!7.57e-09!69;UBERON:0004111!9.41e-09!241;UBERON:0003886!3.20e-08!63;UBERON:0000464!3.83e-08!104;UBERON:0000466!6.75e-08!126;UBERON:0009569!2.40e-07!113;UBERON:0000353!2.79e-07!17;UBERON:0004876!4.09e-07!20;UBERON:0002385!4.15e-07!63;UBERON:0001015!4.15e-07!63;UBERON:0000383!4.15e-07!63;UBERON:0001048!4.74e-07!168;UBERON:0001134!5.18e-07!61;UBERON:0002036!5.18e-07!61;UBERON:0003082!5.18e-07!61;UBERON:0002553!5.95e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0000970;4.34e-07;20!UBERON:0000074;6.50e-07;7!UBERON:0001229;6.50e-07;7!UBERON:0000353;8.91e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000970;4.34e-07;20!UBERON:0000074;6.50e-07;7!UBERON:0001229;6.50e-07;7!UBERON:0000353;8.91e-07;15 | ||
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|phase1_expression=1.81678379270557,1.92690471501885,0.986680828671798,2.00146596706261,5.36353313312745,0,2.53299878168311,1.89515962028049,0.522371256399677,1.72013755551056,2.09340350391728,2.40285509343189,2.37390280405608,0.618831764800233,0.331397375727916,2.6893005858071,3.61616716814386,1.46062018077475,2.43966399395253,3.20114750999649,2.24400760368678,3.44800193625897,1.43117993565528,0.958120975510189,2.88748071068046,0,0,0,0,0,0,0.919421224478927,1.50602959389125,2.21852406100073,0,0,0,0,0,0,0.671746422719773,0.32389366601898,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.895037932904712,1.80719576192283,1.00267582127178,0.579386075843295,0.795285947051099,1.45990461090791,1.13441780596881,0.665188192387692,1.22968699970376,1.57174890597255,2.5500670180478,0.741568885568859,0,0,0.531831842075461,0,0,0,1.59009925893364,1.72046919021225,1.73570250803797,0.56530794192401,1.25849830862972,1.10047216776027,1.04497483268405,1.55050055501597,1.42306505074684,2.67776490211736,0.402829317109147,2.28081631715554,0.976248230192678,1.47065232138347,0.81014194788176,1.16089646769304,0.22452937262617,1.0135033243499,1.53316637465883,0.949265659568129,2.19842092716489,0,0,2.18047026071267,1.98788780678127,0.886413581652058,0.529636723252875,0.860509862246441,1.41867352879343,0.560677600142307,0,1.2333377420858,0,0.269421344139376,1.47115712802113,0.605429710579726,1.15235184896,0.468642863667593,0.312160076830321,0.570471821544449,0.149448680551801,0.939475989150119,1.13311061057692,0.842704840213491,0.61246251376468,0.737005903870608,0.206651562351531,0,0.247266929278557,0,0,0.505008341862199,0.250237039743928,0.277064115484183,0,1.83892677479412,1.20190447125277,0.907457465280168,1.25572744982203,1.70845911054854,0.847727604638247,1.80054657650641,0.721367704669072,2.06112432036503,0.744467425326359,0.506328996723799,0.68205903612839,1.26216887122057,1.28869858099219,1.13152239773168,1.06502877754984,1.0075209822764,1.18692414617341,0,0.272746120590835,0,4.26907971453584,4.5060121229305,2.5562667431294,2.90250954043037,3.28017106138317,4.01475094983413,0,0.643240938192885,1.38134921352481,0.928735856063958,0,0.946454400318751,0.505754070234305,1.68707720918437,1.10293972732394,0.435758888184812,0.949082476444386,0.269662616320329,1.17732879075208,0,2.95262181849859,5.60967095213783,3.7041661019826,1.47008711385542,0,0,0,0,0.614942192715568,2.74508496477641,0.439001141634502,2.24803506515239,1.00528972411631,1.29623823221941,0.977424915930974,0,2.88662684050547,1.27523445472584,2.11335649624479,0.721832238805369,0.925971025153221,0.570762456703795,0,0,0.984868024349589,0.936017060556951,0.297262324577456,0,1.51183915378974,0.425325291727159,0.53735113621709,0.581267877027924,0.766765358330422,0,0,0,0,0,0.571481048629521,0.763976851116555,2.34434894420094,1.71072446022705,0.719792448923265,2.10240140490742,1.14330573052231,2.35475277125258,1.74384027533312,1.0267360014933,0.775630294546667,3.57656445851882,2.535908257668,2.92531928243358,5.2003718455683,1.02882949704857,0,0.799266537048298,0.285955987316295,0.542621605391443,2.46972101034231,0.977208552881205,2.48774364119782,1.58390374586686,0.602878754119172,0.871533458600294,0.599837947092342,1.2162378064119,0,0,1.67737398844108,1.14861935834114,1.42636905040718,1.15825045334063,0.821905290201534,1.07436577943937,0,0,0,0,1.01637849688985,0,0,1.00509759200609,0,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0.623912584592421,0.892144943985809,0.630809660135739,1.52283839490527,1.20378439891088,2.27407504055985,0,0,1.10621501125022,0.781952530212746,1.95801157462741,1.37257369524342,0,0,0,1.21251028578504,1.66435439510497,3.62868351995616,0.744323423456331,2.14846762603287,1.40330047216537,1.15325234330131,1.02341449813341,2.0911009748669,2.96836132889982,0.462629081407967,0.532685175939381,0.657017248110473,0,0.929683027679674,1.0877350463246,0.601519410909855,0.644566922551274,1.49258782613989,0.364182336013434,1.18011973463482,0.902399225814824,1.15523005656622,1.56869953835371,2.92278449306521,1.47772280450026,6.8240030442538,3.06168669497728,3.67057057373637,4.62681758070868,1.62567862526312,3.01013864312912,0.764628819135115,0.831076008928724,2.0148727924996,0,0,3.59030175162945,3.60816110269676,1.62689197332152,0.618246069886334,1.55668090191184,1.23764249880882,0,1.30012049207304,3.21367859688319,2.80345083047154,0.616194468458578,0.15350367472613,1.65403886981437,0.429680979473094,1.0151168573996,0.426133137080504,2.22580089116843,0.826424576804891,0.576570202095319,0.638063562472921,0.2023155617111,1.39453664789186,2.20368642781448,1.3940745403212,1.54016790088044,1.59691809095107,0,1.48259375283136,0.572499546967965,0.372158369359667,1.2655176988749,2.09693213316207,1.79128453917934,1.28381696410176,1.90921948755562,0.78494864019923,0.89936228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| ||
|short_description=p7@ITGB5 | |short_description=p7@ITGB5 | ||
}} | }} |
Revision as of 15:58, 18 November 2012
Short description: | p7@ITGB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ITGB5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000483168_5end |
EntrezGene: | ITGB5 |
HGNC: | 6160 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.13e-11 | 121 |
embryonic cell | 8.07e-10 | 250 |
meso-epithelial cell | 2.41e-08 | 45 |
electrically responsive cell | 6.85e-08 | 61 |
electrically active cell | 6.85e-08 | 61 |
muscle precursor cell | 6.39e-07 | 58 |
myoblast | 6.39e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.39e-07 | 58 |
muscle cell | 6.41e-07 | 55 |
glomerular cell | 7.08e-07 | 7 |
kidney corpuscule cell | 7.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.06e-10 | 117 |
cell layer | 3.12e-09 | 309 |
trunk | 6.59e-09 | 199 |
vasculature | 8.66e-09 | 78 |
vascular system | 8.66e-09 | 78 |
epithelium | 1.39e-08 | 306 |
epithelial vesicle | 6.55e-08 | 78 |
trunk mesenchyme | 6.78e-08 | 122 |
mesenchyme | 7.61e-08 | 160 |
entire embryonic mesenchyme | 7.61e-08 | 160 |
epithelial tube open at both ends | 9.31e-08 | 59 |
blood vessel | 9.31e-08 | 59 |
blood vasculature | 9.31e-08 | 59 |
vascular cord | 9.31e-08 | 59 |
splanchnic layer of lateral plate mesoderm | 2.23e-07 | 83 |
vessel | 5.33e-07 | 68 |
unilaminar epithelium | 6.33e-07 | 148 |
primitive nephron | 7.08e-07 | 7 |
renal glomerulus | 7.08e-07 | 7 |
renal corpuscle | 7.08e-07 | 7 |
glomerular capsule | 7.08e-07 | 7 |
metanephric mesenchyme | 7.08e-07 | 7 |
glomerular tuft | 7.08e-07 | 7 |
S-shaped body | 7.08e-07 | 7 |
renal vesicle | 7.08e-07 | 7 |
comma-shaped body | 7.08e-07 | 7 |
parenchyma | 9.80e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.