FFCP PHASE1:Hg19::chr12:52525577..52525579,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!4.06e-14!254;CL:0000076!4.08e-12!62;CL:0002251!3.06e-10!21;CL:0002076!3.44e-09!43;CL:0000223!4.76e-09!59;CL:0002178!3.08e-07!3 | |ontology_enrichment_celltype=CL:0000066!4.06e-14!254;CL:0000076!4.08e-12!62;CL:0002251!3.06e-10!21;CL:0002076!3.44e-09!43;CL:0000223!4.76e-09!59;CL:0002178!3.08e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000082;1.72e-11;19 | |ontology_enrichment_celltype_v019=CL:0000082;1.72e-11;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.55e-11,19;CL:0000076,5.58e-08,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.90e-08;29!UBERON:0001041;1.17e-07;30 | |ontology_enrichment_development_v019=UBERON:0008947;6.90e-08;29!UBERON:0001041;1.17e-07;30 | ||
|ontology_enrichment_disease=DOID:1749!2.03e-47!14;DOID:305!4.07e-41!106;DOID:0050687!9.43e-31!143;DOID:162!1.02e-19!235;DOID:14566!3.78e-19!239;DOID:299!8.61e-11!25;DOID:3493!1.56e-10!2;DOID:4074!4.02e-10!2;DOID:4905!4.02e-10!2;DOID:3498!4.02e-10!2;DOID:170!2.25e-07!6 | |ontology_enrichment_disease=DOID:1749!2.03e-47!14;DOID:305!4.07e-41!106;DOID:0050687!9.43e-31!143;DOID:162!1.02e-19!235;DOID:14566!3.78e-19!239;DOID:299!8.61e-11!25;DOID:3493!1.56e-10!2;DOID:4074!4.02e-10!2;DOID:4905!4.02e-10!2;DOID:3498!4.02e-10!2;DOID:170!2.25e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.72e-32;14!DOID:4556;8.69e-18;3!DOID:1324;2.94e-14;15!DOID:0050615;1.95e-13;16!DOID:3908;3.10e-11;5!DOID:3905;8.14e-07;9 | |ontology_enrichment_disease_v019=DOID:1749;1.72e-32;14!DOID:4556;8.69e-18;3!DOID:1324;2.94e-14;15!DOID:0050615;1.95e-13;16!DOID:3908;3.10e-11;5!DOID:3905;8.14e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.46e-32,14;DOID:4556,8.00e-18,3;DOID:1324,2.58e-14,15;DOID:0050615,1.72e-13,16;DOID:3908,2.94e-11,5;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0003343!7.29e-20!4;UBERON:0004785!7.29e-20!4;UBERON:0003729!6.41e-16!5;UBERON:0000344!9.09e-10!12;UBERON:0002075!8.07e-09!18;UBERON:0002114!8.28e-09!12;UBERON:0000974!5.42e-08!10;UBERON:0001264!9.67e-08!10;UBERON:0003922!9.67e-08!10;UBERON:0003923!9.67e-08!10;UBERON:0003924!9.67e-08!10;UBERON:0003921!9.67e-08!10;UBERON:0002108!1.35e-07!14;UBERON:0001007!1.40e-07!155;UBERON:0001555!1.40e-07!155;UBERON:0007026!1.40e-07!155;UBERON:0004119!1.90e-07!169;UBERON:0000925!1.90e-07!169;UBERON:0006595!1.90e-07!169;UBERON:0001045!4.85e-07!11 | |ontology_enrichment_uberon=UBERON:0003343!7.29e-20!4;UBERON:0004785!7.29e-20!4;UBERON:0003729!6.41e-16!5;UBERON:0000344!9.09e-10!12;UBERON:0002075!8.07e-09!18;UBERON:0002114!8.28e-09!12;UBERON:0000974!5.42e-08!10;UBERON:0001264!9.67e-08!10;UBERON:0003922!9.67e-08!10;UBERON:0003923!9.67e-08!10;UBERON:0003924!9.67e-08!10;UBERON:0003921!9.67e-08!10;UBERON:0002108!1.35e-07!14;UBERON:0001007!1.40e-07!155;UBERON:0001555!1.40e-07!155;UBERON:0007026!1.40e-07!155;UBERON:0004119!1.90e-07!169;UBERON:0000925!1.90e-07!169;UBERON:0006595!1.90e-07!169;UBERON:0001045!4.85e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.72e-11;19!UBERON:0000115;1.72e-11;19!UBERON:0002048;4.53e-10;22!UBERON:0004807;4.53e-10;22!UBERON:0000117;4.53e-10;22!UBERON:0000171;4.53e-10;22!UBERON:0000170;4.53e-10;22 | |ontology_enrichment_uberon_v019=UBERON:0004802;1.72e-11;19!UBERON:0000115;1.72e-11;19!UBERON:0002048;4.53e-10;22!UBERON:0004807;4.53e-10;22!UBERON:0000117;4.53e-10;22!UBERON:0000171;4.53e-10;22!UBERON:0000170;4.53e-10;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.55e-11,19;UBERON:0000115,1.55e-11,19;UBERON:0002048,4.14e-10,22;UBERON:0000117,4.14e-10,22;UBERON:0000171,4.14e-10,22;UBERON:0000170,4.14e-10,22;UBERON:0005597,4.14e-10,22;UBERON:0000118,4.14e-10,22;UBERON:0004807,3.65e-08,28;UBERON:0005178,6.75e-07,34;UBERON:0002224,6.75e-07,34;UBERON:0005181,9.98e-07,35 | |||
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|short_description=p@chr12:52525577..52525579,- | |short_description=p@chr12:52525577..52525579,- | ||
}} | }} |
Revision as of 23:05, 20 November 2012
Short description: | p@chr12:52525577..52525579, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:52525577..52525579, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.55e-11 | 19 |
squamous epithelial cell | 5.58e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.55e-11 | 19 |
lung epithelium | 1.55e-11 | 19 |
lung | 4.14e-10 | 22 |
respiratory tube | 4.14e-10 | 22 |
respiration organ | 4.14e-10 | 22 |
pair of lungs | 4.14e-10 | 22 |
lung primordium | 4.14e-10 | 22 |
lung bud | 4.14e-10 | 22 |
respiratory system epithelium | 3.65e-08 | 28 |
thoracic cavity element | 6.75e-07 | 34 |
thoracic cavity | 6.75e-07 | 34 |
thoracic segment organ | 9.98e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.46e-32 | 14 |
lung large cell carcinoma | 8.00e-18 | 3 |
lung cancer | 2.58e-14 | 15 |
respiratory system cancer | 1.72e-13 | 16 |
non-small cell lung carcinoma | 2.94e-11 | 5 |
lung carcinoma | 7.91e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.