FFCP PHASE1:Hg19::chr9:23769271..23769295,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000188!2.04e-78!9;CL:0000594!6.04e-34!3;CL:0000680!2.80e-18!57;CL:0000056!2.80e-18!57;CL:0000355!2.80e-18!57;CL:0000183!1.13e-17!59;CL:0000187!1.12e-15!54;CL:0000393!5.35e-14!60;CL:0000211!5.35e-14!60;CL:0000222!4.68e-08!119;CL:0002575!5.11e-07!2 | |ontology_enrichment_celltype=CL:0000188!2.04e-78!9;CL:0000594!6.04e-34!3;CL:0000680!2.80e-18!57;CL:0000056!2.80e-18!57;CL:0000355!2.80e-18!57;CL:0000183!1.13e-17!59;CL:0000187!1.12e-15!54;CL:0000393!5.35e-14!60;CL:0000211!5.35e-14!60;CL:0000222!4.68e-08!119;CL:0002575!5.11e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000188;8.65e-59;9!CL:0002575;9.86e-18;2!CL:0000594;2.07e-12;3!CL:0000669;1.50e-09;4!CL:0000393;2.12e-07;61!CL:0000211;2.12e-07;61!CL:0000187;7.26e-07;55 | |ontology_enrichment_celltype_v019=CL:0000188;8.65e-59;9!CL:0002575;9.86e-18;2!CL:0000594;2.07e-12;3!CL:0000669;1.50e-09;4!CL:0000393;2.12e-07;61!CL:0000211;2.12e-07;61!CL:0000187;7.26e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.00e-58,9;CL:0002575,7.67e-18,2;CL:0000594,2.07e-12,3;CL:0000187,3.45e-10,55;CL:0000680,1.09e-09,58;CL:0000056,1.09e-09,58;CL:0000355,1.09e-09,58;CL:0000669,1.32e-09,4;CL:0000393,3.07e-09,61;CL:0000211,3.07e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000355;2.34e-08;58 | |ontology_enrichment_development_v019=CL:0000355;2.34e-08;58 | ||
|ontology_enrichment_disease=DOID:2355!3.85e-12!1 | |ontology_enrichment_disease=DOID:2355!3.85e-12!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!5.37e-17!61;UBERON:0002036!5.37e-17!61;UBERON:0003082!5.37e-17!61;UBERON:0002385!2.04e-16!63;UBERON:0001015!2.04e-16!63;UBERON:0000383!2.04e-16!63;UBERON:0000486!5.99e-15!82;UBERON:0004290!1.21e-14!70;UBERON:0000914!3.84e-12!83;UBERON:0002329!3.84e-12!83;UBERON:0003077!3.84e-12!83;UBERON:0003059!3.84e-12!83;UBERON:0007282!3.84e-12!83;UBERON:0009618!3.84e-12!83;UBERON:0007285!3.84e-12!83;UBERON:0007190!4.81e-12!1;UBERON:0000490!9.34e-07!138 | |ontology_enrichment_uberon=UBERON:0001134!5.37e-17!61;UBERON:0002036!5.37e-17!61;UBERON:0003082!5.37e-17!61;UBERON:0002385!2.04e-16!63;UBERON:0001015!2.04e-16!63;UBERON:0000383!2.04e-16!63;UBERON:0000486!5.99e-15!82;UBERON:0004290!1.21e-14!70;UBERON:0000914!3.84e-12!83;UBERON:0002329!3.84e-12!83;UBERON:0003077!3.84e-12!83;UBERON:0003059!3.84e-12!83;UBERON:0007282!3.84e-12!83;UBERON:0009618!3.84e-12!83;UBERON:0007285!3.84e-12!83;UBERON:0007190!4.81e-12!1;UBERON:0000490!9.34e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.87e-33;16!UBERON:0002036;1.87e-33;16!UBERON:0002385;1.09e-16;31!UBERON:0001015;1.09e-16;31!UBERON:0000383;1.09e-16;31 | |ontology_enrichment_uberon_v019=UBERON:0001134;1.87e-33;16!UBERON:0002036;1.87e-33;16!UBERON:0002385;1.09e-16;31!UBERON:0001015;1.09e-16;31!UBERON:0000383;1.09e-16;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.24e-09,62;UBERON:0002036,4.24e-09,62;UBERON:0003082,4.24e-09,62;UBERON:0002385,7.87e-09,64;UBERON:0001015,7.87e-09,64;UBERON:0000383,7.87e-09,64;UBERON:0002329,5.22e-08,71;UBERON:0003059,5.22e-08,71;UBERON:0007282,5.22e-08,71;UBERON:0004290,5.22e-08,71;UBERON:0009618,5.22e-08,71;UBERON:0003077,6.64e-08,72;UBERON:0007285,6.64e-08,72;UBERON:0007524,8.39e-08,73;UBERON:0007503,2.48e-07,78;UBERON:0000486,6.43e-07,83 | |||
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|short_description=p@chr9:23769271..23769295,- | |short_description=p@chr9:23769271..23769295,- | ||
}} | }} |
Revision as of 07:22, 21 November 2012
Short description: | p@chr9:23769271..23769295, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:23769271..23769295, - |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.00e-58 | 9 |
central nervous system pericyte | 7.67e-18 | 2 |
skeletal muscle satellite cell | 2.07e-12 | 3 |
muscle cell | 3.45e-10 | 55 |
muscle precursor cell | 1.09e-09 | 58 |
myoblast | 1.09e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-09 | 58 |
pericyte cell | 1.32e-09 | 4 |
electrically responsive cell | 3.07e-09 | 61 |
electrically active cell | 3.07e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.24e-09 | 62 |
striated muscle tissue | 4.24e-09 | 62 |
myotome | 4.24e-09 | 62 |
muscle tissue | 7.87e-09 | 64 |
musculature | 7.87e-09 | 64 |
musculature of body | 7.87e-09 | 64 |
somite | 5.22e-08 | 71 |
presomitic mesoderm | 5.22e-08 | 71 |
presumptive segmental plate | 5.22e-08 | 71 |
dermomyotome | 5.22e-08 | 71 |
trunk paraxial mesoderm | 5.22e-08 | 71 |
paraxial mesoderm | 6.64e-08 | 72 |
presumptive paraxial mesoderm | 6.64e-08 | 72 |
dense mesenchyme tissue | 8.39e-08 | 73 |
epithelial vesicle | 2.48e-07 | 78 |
multilaminar epithelium | 6.43e-07 | 83 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.