FFCP PHASE1:Hg19::chr20:22565612..22565627,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000223!5.78e-22!59;CL:0000181!7.11e-15!12;CL:0000417!7.11e-15!12;CL:0000668!7.11e-15!12;CL:0000414!7.11e-15!12;CL:0000412!7.11e-15!12;CL:0000182!7.11e-15!12;CL:0002076!5.53e-13!43;CL:0002368!1.22e-09!13;CL:0000066!2.62e-09!254;CL:0002251!3.79e-07!21 | |ontology_enrichment_celltype=CL:0000223!5.78e-22!59;CL:0000181!7.11e-15!12;CL:0000417!7.11e-15!12;CL:0000668!7.11e-15!12;CL:0000414!7.11e-15!12;CL:0000412!7.11e-15!12;CL:0000182!7.11e-15!12;CL:0002076!5.53e-13!43;CL:0002368!1.22e-09!13;CL:0000066!2.62e-09!254;CL:0002251!3.79e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.16e-22;12!CL:0002328;9.11e-07;3 | |ontology_enrichment_celltype_v019=CL:0000182;3.16e-22;12!CL:0002328;9.11e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.94e-22,12;CL:0000223,4.26e-07,58;CL:0002328,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.32e-24;11!UBERON:0009497;1.50e-20;13!UBERON:0001041;9.26e-14;30!UBERON:0003104;9.61e-09;31 | |ontology_enrichment_development_v019=UBERON:0004161;3.32e-24;11!UBERON:0009497;1.50e-20;13!UBERON:0001041;9.26e-14;30!UBERON:0003104;9.61e-09;31 | ||
|ontology_enrichment_disease=DOID:305!1.27e-12!106;DOID:0050687!6.82e-10!143;DOID:7!4.05e-09!39;DOID:3119!4.62e-09!14 | |ontology_enrichment_disease=DOID:305!1.27e-12!106;DOID:0050687!6.82e-10!143;DOID:7!4.05e-09!39;DOID:3119!4.62e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.03e-17;1!DOID:4549;1.03e-17;1!DOID:5861;1.03e-17;1!DOID:6496;1.03e-17;1 | |ontology_enrichment_disease_v019=DOID:3371;1.03e-17;1!DOID:4549;1.03e-17;1!DOID:5861;1.03e-17;1!DOID:6496;1.03e-17;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,6.23e-18,1;DOID:4549,6.23e-18,1;DOID:5861,6.23e-18,1;DOID:6496,6.23e-18,1;DOID:305,2.93e-07,106;DOID:0050687,7.80e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0009497!5.57e-19!25;UBERON:0000015!5.57e-19!25;UBERON:0002423!5.57e-19!25;UBERON:0006235!5.57e-19!25;UBERON:0004161!5.57e-19!25;UBERON:0004119!2.37e-16!169;UBERON:0000925!2.37e-16!169;UBERON:0006595!2.37e-16!169;UBERON:0007499!5.45e-16!25;UBERON:0008835!2.56e-15!22;UBERON:0003894!2.56e-15!22;UBERON:0009856!2.78e-15!26;UBERON:0001007!1.19e-14!155;UBERON:0001555!1.19e-14!155;UBERON:0007026!1.19e-14!155;UBERON:0009854!1.46e-14!23;UBERON:0004921!1.05e-13!129;UBERON:0004185!1.05e-13!129;UBERON:0003929!1.09e-13!54;UBERON:0005911!3.70e-13!82;UBERON:0002107!9.18e-12!19;UBERON:0006925!9.18e-12!19;UBERON:0008836!9.18e-12!19;UBERON:0000077!2.12e-11!130;UBERON:0001041!3.88e-10!98;UBERON:0000344!9.03e-10!12;UBERON:0002294!3.16e-08!7;UBERON:0001173!3.16e-08!7;UBERON:0004912!3.16e-08!7;UBERON:0005057!3.23e-08!26;UBERON:0005172!2.98e-07!55;UBERON:0005173!2.98e-07!55;UBERON:0005177!4.74e-07!107 | |ontology_enrichment_uberon=UBERON:0009497!5.57e-19!25;UBERON:0000015!5.57e-19!25;UBERON:0002423!5.57e-19!25;UBERON:0006235!5.57e-19!25;UBERON:0004161!5.57e-19!25;UBERON:0004119!2.37e-16!169;UBERON:0000925!2.37e-16!169;UBERON:0006595!2.37e-16!169;UBERON:0007499!5.45e-16!25;UBERON:0008835!2.56e-15!22;UBERON:0003894!2.56e-15!22;UBERON:0009856!2.78e-15!26;UBERON:0001007!1.19e-14!155;UBERON:0001555!1.19e-14!155;UBERON:0007026!1.19e-14!155;UBERON:0009854!1.46e-14!23;UBERON:0004921!1.05e-13!129;UBERON:0004185!1.05e-13!129;UBERON:0003929!1.09e-13!54;UBERON:0005911!3.70e-13!82;UBERON:0002107!9.18e-12!19;UBERON:0006925!9.18e-12!19;UBERON:0008836!9.18e-12!19;UBERON:0000077!2.12e-11!130;UBERON:0001041!3.88e-10!98;UBERON:0000344!9.03e-10!12;UBERON:0002294!3.16e-08!7;UBERON:0001173!3.16e-08!7;UBERON:0004912!3.16e-08!7;UBERON:0005057!3.23e-08!26;UBERON:0005172!2.98e-07!55;UBERON:0005173!2.98e-07!55;UBERON:0005177!4.74e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.19e-21;19!UBERON:0006925;1.19e-21;19!UBERON:0002423;1.72e-16;25!UBERON:0002365;9.26e-14;31!UBERON:0002330;9.26e-14;31!UBERON:0002368;3.02e-10;33!UBERON:0000949;6.46e-09;43!UBERON:0002418;9.11e-07;3!UBERON:0004815;9.11e-07;3!UBERON:0004755;9.11e-07;3!UBERON:0002031;9.11e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.19e-21;19!UBERON:0006925;1.19e-21;19!UBERON:0002423;1.72e-16;25!UBERON:0002365;9.26e-14;31!UBERON:0002330;9.26e-14;31!UBERON:0002368;3.02e-10;33!UBERON:0000949;6.46e-09;43!UBERON:0002418;9.11e-07;3!UBERON:0004815;9.11e-07;3!UBERON:0004755;9.11e-07;3!UBERON:0002031;9.11e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.30e-21,19;UBERON:0006925,1.30e-21,19;UBERON:0008836,1.30e-21,19;UBERON:0008835,1.09e-18,22;UBERON:0003894,1.09e-18,22;UBERON:0009854,7.00e-18,23;UBERON:0007499,1.84e-16,25;UBERON:0009497,1.84e-16,25;UBERON:0000015,1.84e-16,25;UBERON:0002423,1.84e-16,25;UBERON:0006235,1.84e-16,25;UBERON:0004161,1.84e-16,25;UBERON:0009856,7.82e-16,26;UBERON:0002365,2.70e-13,31;UBERON:0002330,2.70e-13,31;UBERON:0002368,8.75e-12,35;UBERON:0005911,2.08e-09,82;UBERON:0000949,3.57e-09,45;UBERON:0001041,7.67e-09,87;UBERON:0003929,1.21e-07,54;UBERON:0005172,1.21e-07,54;UBERON:0005173,1.21e-07,54;UBERON:0005177,1.49e-07,101;UBERON:0002530,5.40e-07,59;UBERON:0002417,7.08e-07,60;UBERON:0000916,7.08e-07,60;UBERON:0002418,7.70e-07,3;UBERON:0004755,7.70e-07,3;UBERON:0009569,9.18e-07,112;UBERON:0004815,9.64e-07,3;UBERON:0002031,9.64e-07,3 | |||
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| ||
|short_description=p@chr20:22565612..22565627,- | |short_description=p@chr20:22565612..22565627,- | ||
}} | }} |
Revision as of 07:32, 21 November 2012
Short description: | p@chr20:22565612..22565627, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:22565612..22565627, - |
Coexpression cluster: | C4016_gastrointestinal_anaplastic_maxillary_small_smallcell_argyrophil_Bronchial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.94e-22 | 12 |
endodermal cell | 4.26e-07 | 58 |
bronchial epithelial cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.30e-21 | 19 |
digestive gland | 1.30e-21 | 19 |
liver bud | 1.30e-21 | 19 |
hepatic diverticulum | 1.09e-18 | 22 |
liver primordium | 1.09e-18 | 22 |
digestive tract diverticulum | 7.00e-18 | 23 |
epithelial sac | 1.84e-16 | 25 |
epithelium of foregut-midgut junction | 1.84e-16 | 25 |
anatomical boundary | 1.84e-16 | 25 |
hepatobiliary system | 1.84e-16 | 25 |
foregut-midgut junction | 1.84e-16 | 25 |
septum transversum | 1.84e-16 | 25 |
sac | 7.82e-16 | 26 |
exocrine gland | 2.70e-13 | 31 |
exocrine system | 2.70e-13 | 31 |
endocrine gland | 8.75e-12 | 35 |
endo-epithelium | 2.08e-09 | 82 |
endocrine system | 3.57e-09 | 45 |
foregut | 7.67e-09 | 87 |
gut epithelium | 1.21e-07 | 54 |
abdomen element | 1.21e-07 | 54 |
abdominal segment element | 1.21e-07 | 54 |
trunk region element | 1.49e-07 | 101 |
gland | 5.40e-07 | 59 |
abdominal segment of trunk | 7.08e-07 | 60 |
abdomen | 7.08e-07 | 60 |
cartilage tissue | 7.70e-07 | 3 |
skeletal tissue | 7.70e-07 | 3 |
subdivision of trunk | 9.18e-07 | 112 |
lower respiratory tract epithelium | 9.64e-07 | 3 |
epithelium of bronchus | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.23e-18 | 1 |
extraosseous chondrosarcoma | 6.23e-18 | 1 |
myxoid chondrosarcoma | 6.23e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 6.23e-18 | 1 |
carcinoma | 2.93e-07 | 106 |
cell type cancer | 7.80e-07 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.