FFCP PHASE1:Hg19::chr10:107445974..107445984,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=30564|TSSclassifier=N|UniProt=|association_with_transcript=-95bp_to_ENST00000419975_5end|coexpression_cluster_id=C364|description=CAGE_peak_1_at_YWHAZP5_5end|id=chr10:107445974..107445984,+|ontology_enrichment_celltype=CL:0002057!2.05e-24!42;CL:0000860!1.73e-23!45;CL:0000557!2.07e-16!71;CL:0002009!2.49e-16!65;CL:0002194!2.56e-16!63;CL:0000576!2.56e-16!63;CL:0000040!2.56e-16!63;CL:0000559!2.56e-16!63;CL:0000839!6.95e-16!70;CL:0000766!2.77e-15!76;CL:0000763!9.23e-10!112;CL:0000049!9.23e-10!112;CL:0002031!1.29e-07!124;CL:0000738!1.54e-07!140;CL:0002087!2.73e-07!119|ontology_enrichment_celltype_v019=CL:0000860;1.51e-73;33!CL:0002057;1.51e-73;33!CL:0000473;7.03e-54;39!CL:0000234;7.03e-54;39!CL:0000576;2.76e-35;48!CL:0000766;2.91e-23;69!CL:0000763;7.96e-10;100!CL:0002166;7.00e-09;3!CL:0002087;3.12e-08;104!CL:0000228;1.17e-07;1!CL:0002372;1.17e-07;1|ontology_enrichment_celltype_v019_2=CL:0000860,1.20e-65,42;CL:0002057,1.20e-65,42;CL:0000473,1.66e-62,48;CL:0000234,1.66e-62,48;CL:0002194,4.34e-49,59;CL:0000576,4.34e-49,59;CL:0000040,4.34e-49,59;CL:0000559,4.34e-49,59;CL:0002009,2.34e-47,61;CL:0000839,1.77e-43,66;CL:0000766,1.96e-43,72;CL:0000557,9.00e-43,67;CL:0000763,4.12e-30,108;CL:0000049,4.12e-30,108;CL:0002087,3.80e-23,115;CL:0000738,6.09e-23,136;CL:0002031,5.37e-22,120;CL:0002032,1.25e-18,161;CL:0000837,1.25e-18,161;CL:0000037,1.19e-17,168;CL:0000988,1.67e-16,177;CL:0002166,9.28e-09,3;CL:0000228,9.71e-08,1;CL:0002372,9.71e-08,1|ontology_enrichment_development_v019=CL:0002057;1.64e-49;42!CL:0000049;4.32e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.02e-13!80;UBERON:0001474!9.54e-12!86;UBERON:0004765!1.32e-10!101;UBERON:0001434!1.32e-10!101;UBERON:0002390!5.77e-10!102;UBERON:0003061!5.77e-10!102;UBERON:0002193!1.50e-08!112;UBERON:0002405!6.31e-08!115|ontology_enrichment_uberon_v019=UBERON:0001708;7.26e-07;4!UBERON:0008895;7.26e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.12e-37,76;UBERON:0004765,8.36e-37,90;UBERON:0001474,3.32e-34,82;UBERON:0001434,1.13e-32,100;UBERON:0002405,1.17e-29,93;UBERON:0002390,6.35e-28,98;UBERON:0003061,6.35e-28,98;UBERON:0002193,6.21e-25,108;UBERON:0002204,1.96e-19,167;UBERON:0003081,2.26e-12,203;UBERON:0000926,4.37e-07,315;UBERON:0004120,4.37e-07,315;UBERON:0006603,4.37e-07,315;UBERON:0001708,8.95e-07,4;UBERON:0008895,8.95e-07,4|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0.164201178899891,0.157421562627358,0,0,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0.726991193897824,1.88937971844405,1.4555043671269,0.929716147622738,1.23350366406548,2.78735733805593,2.01384674625505,1.0246428261164,1.89185783910868,1.72372840368309,1.29096936716765,1.35426486594342,0.752969358170419,2.18324920046277,4.71919317334678,0.918251677112708,0.641858054152187,3.83602275479425,0.329851300186716,1.19678194572979,2.98357325372886,0.580418477257168,1.13477044938228,4.35975574296902,0.502497330513487,2.08593167368081,2.6062661364614,0.605399502633369,1.10483290796269,3.16462387440884,0.845021145247767,1.06302149982522,0,0.22465726229299,0.750884464207532,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0.83593247695339,0.32592226663359,0,0,0.891283655081389,0.589211814949674,0.886135578334485,0.812411591295047,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0.579606171470105,0.296573126324121,0.802622484269139,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0,0.280901613404497,0.204154171254893,0,0,0,0,0.910161361938026,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0.337552664482532,0.292311015483596,0.252433774244115,0,0.646584227275248,0,0,0.339121184620975,0.386521706326594,0.545492241181669,0,0.243947412259191,0.132529768321485,0,0,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0.354920400119532,0.674338760312407,0.964044119533928,0,0.871517776369625,0.949082476444386,0.269662616320329,0.98110732562673,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0.234004265139238,0,0,1.00789276919316,1.55952606966625,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=30564 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-95bp_to_ENST00000419975_5end | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_1_at_YWHAZP5_5end | |||
|id=chr10:107445974..107445984,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.05e-24!42;CL:0000860!1.73e-23!45;CL:0000557!2.07e-16!71;CL:0002009!2.49e-16!65;CL:0002194!2.56e-16!63;CL:0000576!2.56e-16!63;CL:0000040!2.56e-16!63;CL:0000559!2.56e-16!63;CL:0000839!6.95e-16!70;CL:0000766!2.77e-15!76;CL:0000763!9.23e-10!112;CL:0000049!9.23e-10!112;CL:0002031!1.29e-07!124;CL:0000738!1.54e-07!140;CL:0002087!2.73e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.51e-73;33!CL:0002057;1.51e-73;33!CL:0000473;7.03e-54;39!CL:0000234;7.03e-54;39!CL:0000576;2.76e-35;48!CL:0000766;2.91e-23;69!CL:0000763;7.96e-10;100!CL:0002166;7.00e-09;3!CL:0002087;3.12e-08;104!CL:0000228;1.17e-07;1!CL:0002372;1.17e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.20e-65,42;CL:0002057,1.20e-65,42;CL:0000473,1.66e-62,48;CL:0000234,1.66e-62,48;CL:0002194,4.34e-49,59;CL:0000576,4.34e-49,59;CL:0000040,4.34e-49,59;CL:0000559,4.34e-49,59;CL:0002009,2.34e-47,61;CL:0000839,1.77e-43,66;CL:0000766,1.96e-43,72;CL:0000557,9.00e-43,67;CL:0000763,4.12e-30,108;CL:0000049,4.12e-30,108;CL:0002087,3.80e-23,115;CL:0000738,6.09e-23,136;CL:0002031,5.37e-22,120;CL:0002032,1.25e-18,161;CL:0000837,1.25e-18,161;CL:0000037,1.19e-17,168;CL:0000988,1.67e-16,177;CL:0002166,9.28e-09,3;CL:0000228,9.71e-08,1;CL:0002372,9.71e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;1.64e-49;42!CL:0000049;4.32e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.02e-13!80;UBERON:0001474!9.54e-12!86;UBERON:0004765!1.32e-10!101;UBERON:0001434!1.32e-10!101;UBERON:0002390!5.77e-10!102;UBERON:0003061!5.77e-10!102;UBERON:0002193!1.50e-08!112;UBERON:0002405!6.31e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.26e-07;4!UBERON:0008895;7.26e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.12e-37,76;UBERON:0004765,8.36e-37,90;UBERON:0001474,3.32e-34,82;UBERON:0001434,1.13e-32,100;UBERON:0002405,1.17e-29,93;UBERON:0002390,6.35e-28,98;UBERON:0003061,6.35e-28,98;UBERON:0002193,6.21e-25,108;UBERON:0002204,1.96e-19,167;UBERON:0003081,2.26e-12,203;UBERON:0000926,4.37e-07,315;UBERON:0004120,4.37e-07,315;UBERON:0006603,4.37e-07,315;UBERON:0001708,8.95e-07,4;UBERON:0008895,8.95e-07,4 | |||
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| |||
|short_description=p1@YWHAZP5 | |||
}} |
Revision as of 11:37, 10 September 2013
Short description: | p1@YWHAZP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_YWHAZP5_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | -95bp_to_ENST00000419975_5end |
EntrezGene: | NA |
HGNC: | 30564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.20e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.20e-65 | 42 |
defensive cell | 1.66e-62 | 48 |
phagocyte | 1.66e-62 | 48 |
monopoietic cell | 4.34e-49 | 59 |
monocyte | 4.34e-49 | 59 |
monoblast | 4.34e-49 | 59 |
promonocyte | 4.34e-49 | 59 |
macrophage dendritic cell progenitor | 2.34e-47 | 61 |
myeloid lineage restricted progenitor cell | 1.77e-43 | 66 |
myeloid leukocyte | 1.96e-43 | 72 |
granulocyte monocyte progenitor cell | 9.00e-43 | 67 |
myeloid cell | 4.12e-30 | 108 |
common myeloid progenitor | 4.12e-30 | 108 |
nongranular leukocyte | 3.80e-23 | 115 |
leukocyte | 6.09e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 5.37e-22 | 120 |
hematopoietic oligopotent progenitor cell | 1.25e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-18 | 161 |
hematopoietic stem cell | 1.19e-17 | 168 |
hematopoietic cell | 1.67e-16 | 177 |
epithelial cell of Malassez | 9.28e-09 | 3 |
multinucleate cell | 9.71e-08 | 1 |
myotube | 9.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.12e-37 | 76 |
skeletal element | 8.36e-37 | 90 |
bone element | 3.32e-34 | 82 |
skeletal system | 1.13e-32 | 100 |
immune system | 1.17e-29 | 93 |
hematopoietic system | 6.35e-28 | 98 |
blood island | 6.35e-28 | 98 |
hemolymphoid system | 6.21e-25 | 108 |
musculoskeletal system | 1.96e-19 | 167 |
lateral plate mesoderm | 2.26e-12 | 203 |
mesoderm | 4.37e-07 | 315 |
mesoderm-derived structure | 4.37e-07 | 315 |
presumptive mesoderm | 4.37e-07 | 315 |
jaw skeleton | 8.95e-07 | 4 |
splanchnocranium | 8.95e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.