FFCP PHASE1:Hg19::chr10:43609342..43609351,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C92|description=CAGE_peak_at_chr10:43609342..43609351,+|id=chr10:43609342..43609351,+|ontology_enrichment_celltype=CL:0002393!5.03e-50!9;CL:0002397!5.03e-50!9;CL:0000875!6.65e-39!3;CL:0002396!6.65e-39!3;CL:0002057!1.49e-34!42;CL:0000860!3.61e-32!45;CL:0000766!8.77e-26!76;CL:0002194!2.97e-22!63;CL:0000576!2.97e-22!63;CL:0000040!2.97e-22!63;CL:0000559!2.97e-22!63;CL:0002009!1.54e-21!65;CL:0000839!6.22e-20!70;CL:0000557!1.23e-19!71;CL:0000767!1.39e-17!3;CL:0000763!4.43e-17!112;CL:0000049!4.43e-17!112;CL:0000738!2.28e-13!140;CL:0002087!3.06e-11!119;CL:0002032!4.18e-11!165;CL:0000837!4.18e-11!165;CL:0002031!9.80e-11!124;CL:0000037!1.38e-10!172;CL:0000566!1.38e-10!172;CL:0000988!6.47e-10!182;CL:0000094!3.67e-07!8|ontology_enrichment_celltype_v019=CL:0000875;2.33e-118;3!CL:0002396;2.33e-118;3!CL:0002393;4.06e-27;6!CL:0002397;4.06e-27;6!CL:0000576;7.81e-13;48!CL:0000766;1.47e-11;69|ontology_enrichment_celltype_v019_2=CL:0000875,2.33e-118,3;CL:0002396,2.33e-118,3;CL:0002393,4.60e-109,9;CL:0002397,4.60e-109,9;CL:0000860,4.07e-24,42;CL:0002057,4.07e-24,42;CL:0000473,3.34e-21,48;CL:0000234,3.34e-21,48;CL:0002194,4.10e-17,59;CL:0000576,4.10e-17,59;CL:0000040,4.10e-17,59;CL:0000559,4.10e-17,59;CL:0002009,1.38e-16,61;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002087,3.65e-09,115;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136|ontology_enrichment_development_v019=CL:0002057;6.22e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.60e-17!80;UBERON:0001474!5.02e-16!86;UBERON:0004765!1.81e-13!101;UBERON:0001434!1.81e-13!101;UBERON:0006834!2.07e-13!1;UBERON:0002390!2.52e-13!102;UBERON:0003061!2.52e-13!102;UBERON:0002193!5.04e-12!112;UBERON:0002405!1.12e-11!115;UBERON:0002204!1.28e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,1.05627643155971,1.27562579979026,0.209658645508376,0,0,0,4.27519115611873,3.38158351238453,2.55729815270488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr10:43609342..43609351,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr10:43609342..43609351,+ | |||
|id=chr10:43609342..43609351,+ | |||
|ontology_enrichment_celltype=CL:0002393!5.03e-50!9;CL:0002397!5.03e-50!9;CL:0000875!6.65e-39!3;CL:0002396!6.65e-39!3;CL:0002057!1.49e-34!42;CL:0000860!3.61e-32!45;CL:0000766!8.77e-26!76;CL:0002194!2.97e-22!63;CL:0000576!2.97e-22!63;CL:0000040!2.97e-22!63;CL:0000559!2.97e-22!63;CL:0002009!1.54e-21!65;CL:0000839!6.22e-20!70;CL:0000557!1.23e-19!71;CL:0000767!1.39e-17!3;CL:0000763!4.43e-17!112;CL:0000049!4.43e-17!112;CL:0000738!2.28e-13!140;CL:0002087!3.06e-11!119;CL:0002032!4.18e-11!165;CL:0000837!4.18e-11!165;CL:0002031!9.80e-11!124;CL:0000037!1.38e-10!172;CL:0000566!1.38e-10!172;CL:0000988!6.47e-10!182;CL:0000094!3.67e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.33e-118;3!CL:0002396;2.33e-118;3!CL:0002393;4.06e-27;6!CL:0002397;4.06e-27;6!CL:0000576;7.81e-13;48!CL:0000766;1.47e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,2.33e-118,3;CL:0002396,2.33e-118,3;CL:0002393,4.60e-109,9;CL:0002397,4.60e-109,9;CL:0000860,4.07e-24,42;CL:0002057,4.07e-24,42;CL:0000473,3.34e-21,48;CL:0000234,3.34e-21,48;CL:0002194,4.10e-17,59;CL:0000576,4.10e-17,59;CL:0000040,4.10e-17,59;CL:0000559,4.10e-17,59;CL:0002009,1.38e-16,61;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002087,3.65e-09,115;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.22e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.60e-17!80;UBERON:0001474!5.02e-16!86;UBERON:0004765!1.81e-13!101;UBERON:0001434!1.81e-13!101;UBERON:0006834!2.07e-13!1;UBERON:0002390!2.52e-13!102;UBERON:0003061!2.52e-13!102;UBERON:0002193!5.04e-12!112;UBERON:0002405!1.12e-11!115;UBERON:0002204!1.28e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,1.05627643155971,1.27562579979026,0.209658645508376,0,0,0,4.27519115611873,3.38158351238453,2.55729815270488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:43609342..43609351,+ | |||
}} |
Revision as of 13:25, 10 September 2013
Short description: | p@chr10:43609342..43609351, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:43609342..43609351, + |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 2.33e-118 | 3 |
CD14-low, CD16-positive monocyte | 2.33e-118 | 3 |
intermediate monocyte | 4.60e-109 | 9 |
CD14-positive, CD16-positive monocyte | 4.60e-109 | 9 |
classical monocyte | 4.07e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.07e-24 | 42 |
defensive cell | 3.34e-21 | 48 |
phagocyte | 3.34e-21 | 48 |
monopoietic cell | 4.10e-17 | 59 |
monocyte | 4.10e-17 | 59 |
monoblast | 4.10e-17 | 59 |
promonocyte | 4.10e-17 | 59 |
macrophage dendritic cell progenitor | 1.38e-16 | 61 |
myeloid lineage restricted progenitor cell | 2.11e-15 | 66 |
granulocyte monocyte progenitor cell | 3.48e-15 | 67 |
myeloid leukocyte | 3.42e-14 | 72 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
nongranular leukocyte | 3.65e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-13 | 76 |
bone element | 1.45e-12 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
skeletal system | 1.95e-10 | 100 |
hemolymphoid system | 1.03e-09 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.