FFCP PHASE1:Hg19::chr10:60144911..60144939,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7019|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11741|TSSclassifier=S|UniProt=Q00059|association_with_transcript=129bp_to_ENST00000487519_5end|coexpression_cluster_id=C1|description=CAGE_peak_2_at_TFAM_5end|id=chr10:60144911..60144939,+|ontology_enrichment_celltype=CL:0002057!3.47e-45!42;CL:0000860!1.27e-43!45;CL:0000766!1.84e-43!76;CL:0000557!2.44e-40!71;CL:0002009!7.14e-39!65;CL:0002194!3.46e-36!63;CL:0000576!3.46e-36!63;CL:0000040!3.46e-36!63;CL:0000559!3.46e-36!63;CL:0000839!8.23e-35!70;CL:0000763!3.63e-30!112;CL:0000049!3.63e-30!112;CL:0000738!4.01e-30!140;CL:0002087!9.10e-24!119;CL:0002031!2.17e-23!124;CL:0000037!2.95e-23!172;CL:0000566!2.95e-23!172;CL:0002032!7.85e-22!165;CL:0000837!7.85e-22!165;CL:0000988!5.61e-21!182;CL:0002393!3.24e-16!9;CL:0002397!3.24e-16!9;CL:0000219!4.04e-09!390;CL:0000134!8.27e-09!358;CL:0000094!1.30e-08!8;CL:0002320!2.74e-08!365;CL:0000767!7.36e-07!3|ontology_enrichment_celltype_v019=CL:0000860;5.02e-27;33!CL:0002057;5.02e-27;33!CL:0000767;7.71e-26;3!CL:0000473;1.15e-22;39!CL:0000234;1.15e-22;39!CL:0000766;6.46e-20;69!CL:0000576;8.28e-18;48!CL:0000094;3.40e-17;8!CL:0002393;3.15e-13;6!CL:0002397;3.15e-13;6!CL:0000081;1.45e-12;11!CL:0002032;1.55e-09;1!CL:0000557;1.55e-09;1!CL:0000763;2.84e-08;100|ontology_enrichment_celltype_v019_2=CL:0000860,5.63e-36,42;CL:0002057,5.63e-36,42;CL:0000766,1.23e-33,72;CL:0000473,3.47e-31,48;CL:0000234,3.47e-31,48;CL:0000557,3.27e-28,67;CL:0002009,2.85e-27,61;CL:0000763,4.57e-27,108;CL:0000049,4.57e-27,108;CL:0000767,1.23e-25,3;CL:0002194,1.78e-24,59;CL:0000576,1.78e-24,59;CL:0000040,1.78e-24,59;CL:0000559,1.78e-24,59;CL:0000839,1.14e-21,66;CL:0000738,7.02e-21,136;CL:0002032,3.72e-19,161;CL:0000837,3.72e-19,161;CL:0000037,3.20e-18,168;CL:0000988,3.99e-17,177;CL:0000094,4.28e-17,8;CL:0002031,1.18e-14,120;CL:0002087,2.25e-13,115;CL:0000081,1.72e-12,11;CL:0002393,5.99e-09,9;CL:0002397,5.99e-09,9;CL:0000134,8.34e-07,354|ontology_enrichment_development_v019=CL:0002057;9.94e-28;42!CL:0000049;5.96e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.59e-34!80;UBERON:0001474!3.17e-32!86;UBERON:0002390!6.29e-31!102;UBERON:0003061!6.29e-31!102;UBERON:0002193!9.05e-27!112;UBERON:0004765!1.43e-26!101;UBERON:0001434!1.43e-26!101;UBERON:0002405!1.31e-20!115;UBERON:0002204!4.42e-12!167;UBERON:0003081!5.65e-10!216;UBERON:0002384!1.84e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.35e-24,76;UBERON:0001474,1.28e-22,82;UBERON:0004765,2.18e-20,90;UBERON:0002405,1.20e-19,93;UBERON:0002390,1.62e-18,98;UBERON:0003061,1.62e-18,98;UBERON:0001434,4.28e-18,100;UBERON:0002193,1.46e-16,108;UBERON:0002204,9.34e-10,167;UBERON:0003081,1.56e-07,203|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,2.36018566109342,1.15148819429164,2.32224184974114,0,0,0,0,0,0,2.76997704265939,1.00272223735071,2.60413044859022,0.223915474239924,0,0.257575567634187,0.581592955118259,1.13362783106643,0.485168122375632,0.929716147622738,0,1.23882548358041,0.28769239232215,1.0246428261164,0.236482229888585,2.41321976515633,1.93645405075148,2.70852973188684,1.12945403725563,0.545812300115692,0,0.612167784741805,0.320929027076094,1.91801137739712,0.329851300186716,0.598390972864896,1.70489900213078,0,0,1.24564449799115,0.251248665256743,1.0429658368404,0.434377689410233,0,0,0,0.633765858935825,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0.855038231223746,0.99458338599545,0.730656615058536,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,8.97206667159332,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0.126995788584338,0.763976851116555,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11741 | |||
|TSSclassifier=S | |||
|UniProt=Q00059 | |||
|association_with_transcript=129bp_to_ENST00000487519_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_TFAM_5end | |||
|id=chr10:60144911..60144939,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.47e-45!42;CL:0000860!1.27e-43!45;CL:0000766!1.84e-43!76;CL:0000557!2.44e-40!71;CL:0002009!7.14e-39!65;CL:0002194!3.46e-36!63;CL:0000576!3.46e-36!63;CL:0000040!3.46e-36!63;CL:0000559!3.46e-36!63;CL:0000839!8.23e-35!70;CL:0000763!3.63e-30!112;CL:0000049!3.63e-30!112;CL:0000738!4.01e-30!140;CL:0002087!9.10e-24!119;CL:0002031!2.17e-23!124;CL:0000037!2.95e-23!172;CL:0000566!2.95e-23!172;CL:0002032!7.85e-22!165;CL:0000837!7.85e-22!165;CL:0000988!5.61e-21!182;CL:0002393!3.24e-16!9;CL:0002397!3.24e-16!9;CL:0000219!4.04e-09!390;CL:0000134!8.27e-09!358;CL:0000094!1.30e-08!8;CL:0002320!2.74e-08!365;CL:0000767!7.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.02e-27;33!CL:0002057;5.02e-27;33!CL:0000767;7.71e-26;3!CL:0000473;1.15e-22;39!CL:0000234;1.15e-22;39!CL:0000766;6.46e-20;69!CL:0000576;8.28e-18;48!CL:0000094;3.40e-17;8!CL:0002393;3.15e-13;6!CL:0002397;3.15e-13;6!CL:0000081;1.45e-12;11!CL:0002032;1.55e-09;1!CL:0000557;1.55e-09;1!CL:0000763;2.84e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.63e-36,42;CL:0002057,5.63e-36,42;CL:0000766,1.23e-33,72;CL:0000473,3.47e-31,48;CL:0000234,3.47e-31,48;CL:0000557,3.27e-28,67;CL:0002009,2.85e-27,61;CL:0000763,4.57e-27,108;CL:0000049,4.57e-27,108;CL:0000767,1.23e-25,3;CL:0002194,1.78e-24,59;CL:0000576,1.78e-24,59;CL:0000040,1.78e-24,59;CL:0000559,1.78e-24,59;CL:0000839,1.14e-21,66;CL:0000738,7.02e-21,136;CL:0002032,3.72e-19,161;CL:0000837,3.72e-19,161;CL:0000037,3.20e-18,168;CL:0000988,3.99e-17,177;CL:0000094,4.28e-17,8;CL:0002031,1.18e-14,120;CL:0002087,2.25e-13,115;CL:0000081,1.72e-12,11;CL:0002393,5.99e-09,9;CL:0002397,5.99e-09,9;CL:0000134,8.34e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;9.94e-28;42!CL:0000049;5.96e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.59e-34!80;UBERON:0001474!3.17e-32!86;UBERON:0002390!6.29e-31!102;UBERON:0003061!6.29e-31!102;UBERON:0002193!9.05e-27!112;UBERON:0004765!1.43e-26!101;UBERON:0001434!1.43e-26!101;UBERON:0002405!1.31e-20!115;UBERON:0002204!4.42e-12!167;UBERON:0003081!5.65e-10!216;UBERON:0002384!1.84e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.35e-24,76;UBERON:0001474,1.28e-22,82;UBERON:0004765,2.18e-20,90;UBERON:0002405,1.20e-19,93;UBERON:0002390,1.62e-18,98;UBERON:0003061,1.62e-18,98;UBERON:0001434,4.28e-18,100;UBERON:0002193,1.46e-16,108;UBERON:0002204,9.34e-10,167;UBERON:0003081,1.56e-07,203 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,2.36018566109342,1.15148819429164,2.32224184974114,0,0,0,0,0,0,2.76997704265939,1.00272223735071,2.60413044859022,0.223915474239924,0,0.257575567634187,0.581592955118259,1.13362783106643,0.485168122375632,0.929716147622738,0,1.23882548358041,0.28769239232215,1.0246428261164,0.236482229888585,2.41321976515633,1.93645405075148,2.70852973188684,1.12945403725563,0.545812300115692,0,0.612167784741805,0.320929027076094,1.91801137739712,0.329851300186716,0.598390972864896,1.70489900213078,0,0,1.24564449799115,0.251248665256743,1.0429658368404,0.434377689410233,0,0,0,0.633765858935825,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0.855038231223746,0.99458338599545,0.730656615058536,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,8.97206667159332,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0.126995788584338,0.763976851116555,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.873633341210151,0,0,0.0730893170861856,0,0,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,1.5476039091159,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0.354996002191696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,19.1720106492146,28.4041977965549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@TFAM | |||
}} |
Revision as of 13:43, 10 September 2013
Short description: | p2@TFAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TFAM_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 129bp_to_ENST00000487519_5end |
EntrezGene: | TFAM |
HGNC: | 11741 |
UniProt: | Q00059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.63e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.63e-36 | 42 |
myeloid leukocyte | 1.23e-33 | 72 |
defensive cell | 3.47e-31 | 48 |
phagocyte | 3.47e-31 | 48 |
granulocyte monocyte progenitor cell | 3.27e-28 | 67 |
macrophage dendritic cell progenitor | 2.85e-27 | 61 |
myeloid cell | 4.57e-27 | 108 |
common myeloid progenitor | 4.57e-27 | 108 |
basophil | 1.23e-25 | 3 |
monopoietic cell | 1.78e-24 | 59 |
monocyte | 1.78e-24 | 59 |
monoblast | 1.78e-24 | 59 |
promonocyte | 1.78e-24 | 59 |
myeloid lineage restricted progenitor cell | 1.14e-21 | 66 |
leukocyte | 7.02e-21 | 136 |
hematopoietic oligopotent progenitor cell | 3.72e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.72e-19 | 161 |
hematopoietic stem cell | 3.20e-18 | 168 |
hematopoietic cell | 3.99e-17 | 177 |
granulocyte | 4.28e-17 | 8 |
hematopoietic lineage restricted progenitor cell | 1.18e-14 | 120 |
nongranular leukocyte | 2.25e-13 | 115 |
blood cell | 1.72e-12 | 11 |
intermediate monocyte | 5.99e-09 | 9 |
CD14-positive, CD16-positive monocyte | 5.99e-09 | 9 |
mesenchymal cell | 8.34e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.35e-24 | 76 |
bone element | 1.28e-22 | 82 |
skeletal element | 2.18e-20 | 90 |
immune system | 1.20e-19 | 93 |
hematopoietic system | 1.62e-18 | 98 |
blood island | 1.62e-18 | 98 |
skeletal system | 4.28e-18 | 100 |
hemolymphoid system | 1.46e-16 | 108 |
musculoskeletal system | 9.34e-10 | 167 |
lateral plate mesoderm | 1.56e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.