FFCP PHASE1:Hg19::chr10:73513319..73513362,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr10:73513319..73513362,-|id=chr10:73513319..73513362,-|ontology_enrichment_celltype=CL:0000766!4.30e-30!76;CL:0000763!6.45e-30!112;CL:0000049!6.45e-30!112;CL:0000037!1.40e-21!172;CL:0000566!1.40e-21!172;CL:0002032!1.12e-20!165;CL:0000837!1.12e-20!165;CL:0000094!9.84e-20!8;CL:0000988!1.22e-19!182;CL:0000839!2.07e-19!70;CL:0000738!5.52e-18!140;CL:0000557!1.56e-17!71;CL:0002057!1.74e-15!42;CL:0002194!1.48e-14!63;CL:0000576!1.48e-14!63;CL:0000040!1.48e-14!63;CL:0000559!1.48e-14!63;CL:0000860!4.22e-14!45;CL:0002009!6.48e-14!65;CL:0000081!7.19e-14!11;CL:0002393!1.57e-12!9;CL:0002397!1.57e-12!9;CL:0002031!4.76e-11!124;CL:0002087!2.65e-09!119;CL:0000775!7.75e-09!3;CL:0000875!3.57e-08!3;CL:0002396!3.57e-08!3;CL:0000767!7.05e-08!3;CL:0002619!1.09e-07!3;CL:0002274!3.11e-07!5;CL:0000457!3.11e-07!5;CL:0002191!3.11e-07!5;CL:0000097!3.11e-07!5;CL:0000831!3.11e-07!5;CL:0002028!3.11e-07!5|ontology_enrichment_celltype_v019=CL:0000094;8.40e-43;8!CL:0000081;6.22e-31;11!CL:0000775;1.34e-22;3!CL:0000771;1.38e-15;2!CL:0000875;4.21e-10;3!CL:0002396;4.21e-10;3!CL:0000767;6.21e-10;3!CL:0000766;8.83e-10;69!CL:0000763;1.44e-08;100!CL:0000576;3.19e-08;48|ontology_enrichment_celltype_v019_2=CL:0000094,7.93e-43,8;CL:0000081,5.97e-31,11;CL:0000766,4.68e-24,72;CL:0000775,1.29e-22,3;CL:0000763,4.06e-19,108;CL:0000049,4.06e-19,108;CL:0000771,1.43e-15,2;CL:0000738,1.94e-14,136;CL:0000037,6.90e-14,168;CL:0002032,4.09e-13,161;CL:0000837,4.09e-13,161;CL:0000988,5.56e-13,177;CL:0002393,3.06e-12,9;CL:0002397,3.06e-12,9;CL:0000860,1.00e-11,42;CL:0002057,1.00e-11,42;CL:0000473,4.35e-10,48;CL:0000234,4.35e-10,48;CL:0000875,4.73e-10,3;CL:0002396,4.73e-10,3;CL:0000767,5.94e-10,3;CL:0002194,1.16e-09,59;CL:0000576,1.16e-09,59;CL:0000040,1.16e-09,59;CL:0000559,1.16e-09,59;CL:0002009,2.70e-09,61;CL:0000839,1.76e-08,66;CL:0000557,2.48e-08,67|ontology_enrichment_development_v019=CL:0000049;5.81e-09;108!CL:0002057;8.76e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.56e-29!102;UBERON:0003061!7.56e-29!102;UBERON:0002193!3.04e-28!112;UBERON:0000178!3.02e-15!15;UBERON:0000179!3.02e-15!15;UBERON:0000463!3.02e-15!15;UBERON:0002371!1.02e-14!80;UBERON:0002405!2.16e-13!115;UBERON:0001474!3.54e-13!86;UBERON:0007023!9.40e-12!115;UBERON:0004765!3.71e-10!101;UBERON:0001434!3.71e-10!101;UBERON:0003081!2.07e-08!216|ontology_enrichment_uberon_v019=UBERON:0000178;1.32e-36;15!UBERON:0000179;1.32e-36;15!UBERON:0000463;1.32e-36;15!UBERON:0002390;9.23e-16;32!UBERON:0002193;2.68e-09;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.67e-36,15;UBERON:0000179,1.67e-36,15;UBERON:0000463,1.67e-36,15;UBERON:0002390,1.89e-21,98;UBERON:0003061,1.89e-21,98;UBERON:0002193,3.83e-19,108;UBERON:0003081,1.65e-08,203;UBERON:0002371,3.61e-07,76|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0,0.223915474239924,1.29557466407592,0.515151135268373,1.74477886535478,1.51150377475524,2.42584061187816,0,0,0,0,0,0.47296445977717,0,0,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0.633765858935825,1.27562579979026,1.25795187305026,1.34794357375794,0.750884464207532,1.28580469357664,2.56511469367124,1.19350006319454,0.91332076882317,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18388626022008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2163210564583,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.434463580514,23.932916736322,48.0721995585801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08937131078603,5.35246044999663,5.69647187174163,2.85878130549347,5.34770955012053,5.18778648954174,4.86028293514303,4.75875105776562,0,0,0,0,0,0,0,0,1.1490322207942,1.2700414963433,0,0,0,0.156679895773023,0,0,0.481764225311099,0.201799707191048,0,0,0,0.223676107892416,0,0.586164286206121,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:73513319..73513362,- | |||
|id=chr10:73513319..73513362,- | |||
|ontology_enrichment_celltype=CL:0000766!4.30e-30!76;CL:0000763!6.45e-30!112;CL:0000049!6.45e-30!112;CL:0000037!1.40e-21!172;CL:0000566!1.40e-21!172;CL:0002032!1.12e-20!165;CL:0000837!1.12e-20!165;CL:0000094!9.84e-20!8;CL:0000988!1.22e-19!182;CL:0000839!2.07e-19!70;CL:0000738!5.52e-18!140;CL:0000557!1.56e-17!71;CL:0002057!1.74e-15!42;CL:0002194!1.48e-14!63;CL:0000576!1.48e-14!63;CL:0000040!1.48e-14!63;CL:0000559!1.48e-14!63;CL:0000860!4.22e-14!45;CL:0002009!6.48e-14!65;CL:0000081!7.19e-14!11;CL:0002393!1.57e-12!9;CL:0002397!1.57e-12!9;CL:0002031!4.76e-11!124;CL:0002087!2.65e-09!119;CL:0000775!7.75e-09!3;CL:0000875!3.57e-08!3;CL:0002396!3.57e-08!3;CL:0000767!7.05e-08!3;CL:0002619!1.09e-07!3;CL:0002274!3.11e-07!5;CL:0000457!3.11e-07!5;CL:0002191!3.11e-07!5;CL:0000097!3.11e-07!5;CL:0000831!3.11e-07!5;CL:0002028!3.11e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.40e-43;8!CL:0000081;6.22e-31;11!CL:0000775;1.34e-22;3!CL:0000771;1.38e-15;2!CL:0000875;4.21e-10;3!CL:0002396;4.21e-10;3!CL:0000767;6.21e-10;3!CL:0000766;8.83e-10;69!CL:0000763;1.44e-08;100!CL:0000576;3.19e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,7.93e-43,8;CL:0000081,5.97e-31,11;CL:0000766,4.68e-24,72;CL:0000775,1.29e-22,3;CL:0000763,4.06e-19,108;CL:0000049,4.06e-19,108;CL:0000771,1.43e-15,2;CL:0000738,1.94e-14,136;CL:0000037,6.90e-14,168;CL:0002032,4.09e-13,161;CL:0000837,4.09e-13,161;CL:0000988,5.56e-13,177;CL:0002393,3.06e-12,9;CL:0002397,3.06e-12,9;CL:0000860,1.00e-11,42;CL:0002057,1.00e-11,42;CL:0000473,4.35e-10,48;CL:0000234,4.35e-10,48;CL:0000875,4.73e-10,3;CL:0002396,4.73e-10,3;CL:0000767,5.94e-10,3;CL:0002194,1.16e-09,59;CL:0000576,1.16e-09,59;CL:0000040,1.16e-09,59;CL:0000559,1.16e-09,59;CL:0002009,2.70e-09,61;CL:0000839,1.76e-08,66;CL:0000557,2.48e-08,67 | |||
|ontology_enrichment_development_v019=CL:0000049;5.81e-09;108!CL:0002057;8.76e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.56e-29!102;UBERON:0003061!7.56e-29!102;UBERON:0002193!3.04e-28!112;UBERON:0000178!3.02e-15!15;UBERON:0000179!3.02e-15!15;UBERON:0000463!3.02e-15!15;UBERON:0002371!1.02e-14!80;UBERON:0002405!2.16e-13!115;UBERON:0001474!3.54e-13!86;UBERON:0007023!9.40e-12!115;UBERON:0004765!3.71e-10!101;UBERON:0001434!3.71e-10!101;UBERON:0003081!2.07e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.32e-36;15!UBERON:0000179;1.32e-36;15!UBERON:0000463;1.32e-36;15!UBERON:0002390;9.23e-16;32!UBERON:0002193;2.68e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.67e-36,15;UBERON:0000179,1.67e-36,15;UBERON:0000463,1.67e-36,15;UBERON:0002390,1.89e-21,98;UBERON:0003061,1.89e-21,98;UBERON:0002193,3.83e-19,108;UBERON:0003081,1.65e-08,203;UBERON:0002371,3.61e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0,0.223915474239924,1.29557466407592,0.515151135268373,1.74477886535478,1.51150377475524,2.42584061187816,0,0,0,0,0,0.47296445977717,0,0,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0.633765858935825,1.27562579979026,1.25795187305026,1.34794357375794,0.750884464207532,1.28580469357664,2.56511469367124,1.19350006319454,0.91332076882317,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18388626022008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2163210564583,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.434463580514,23.932916736322,48.0721995585801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08937131078603,5.35246044999663,5.69647187174163,2.85878130549347,5.34770955012053,5.18778648954174,4.86028293514303,4.75875105776562,0,0,0,0,0,0,0,0,1.1490322207942,1.2700414963433,0,0,0,0.156679895773023,0,0,0.481764225311099,0.201799707191048,0,0,0,0.223676107892416,0,0.586164286206121,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.563903507879121,0.193373663920732,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:73513319..73513362,- | |||
}} |
Revision as of 14:14, 10 September 2013
Short description: | p@chr10:73513319..73513362, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:73513319..73513362, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 7.93e-43 | 8 |
blood cell | 5.97e-31 | 11 |
myeloid leukocyte | 4.68e-24 | 72 |
neutrophil | 1.29e-22 | 3 |
myeloid cell | 4.06e-19 | 108 |
common myeloid progenitor | 4.06e-19 | 108 |
eosinophil | 1.43e-15 | 2 |
leukocyte | 1.94e-14 | 136 |
hematopoietic stem cell | 6.90e-14 | 168 |
hematopoietic oligopotent progenitor cell | 4.09e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.09e-13 | 161 |
hematopoietic cell | 5.56e-13 | 177 |
intermediate monocyte | 3.06e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.06e-12 | 9 |
classical monocyte | 1.00e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.00e-11 | 42 |
defensive cell | 4.35e-10 | 48 |
phagocyte | 4.35e-10 | 48 |
non-classical monocyte | 4.73e-10 | 3 |
CD14-low, CD16-positive monocyte | 4.73e-10 | 3 |
basophil | 5.94e-10 | 3 |
monopoietic cell | 1.16e-09 | 59 |
monocyte | 1.16e-09 | 59 |
monoblast | 1.16e-09 | 59 |
promonocyte | 1.16e-09 | 59 |
macrophage dendritic cell progenitor | 2.70e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.76e-08 | 66 |
granulocyte monocyte progenitor cell | 2.48e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
blood | 1.67e-36 | 15 |
haemolymphatic fluid | 1.67e-36 | 15 |
organism substance | 1.67e-36 | 15 |
hematopoietic system | 1.89e-21 | 98 |
blood island | 1.89e-21 | 98 |
hemolymphoid system | 3.83e-19 | 108 |
lateral plate mesoderm | 1.65e-08 | 203 |
bone marrow | 3.61e-07 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.