FFCP PHASE1:Hg19::chr11:2018395..2018415,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=Q9UHT2|association_with_transcript=-69bp_to_AF118081_5end|coexpression_cluster_id=C227|description=CAGE_peak_9_at_AF118081_5end|id=chr11:2018395..2018415,+|ontology_enrichment_celltype=CL:0000188!9.91e-12!9;CL:0000349!1.52e-07!3;CL:0002577!1.52e-07!3;CL:0002541!7.98e-07!3|ontology_enrichment_celltype_v019=CL:0000349;6.87e-27;19!CL:0002577;1.85e-14;3!CL:0002536;1.12e-09;2!CL:0002537;6.48e-09;5!CL:0002541;3.73e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,5.30e-27,19;CL:0002577,1.69e-14,3;CL:0002536,7.73e-10,2;CL:0002537,6.66e-09,5;CL:0002541,3.63e-07,3|ontology_enrichment_development_v019=UBERON:0008947;1.44e-12;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!3.36e-20!14;UBERON:0000158!3.36e-20!14;UBERON:0001737!1.33e-17!9;UBERON:0000478!9.96e-17!24;UBERON:0001557!3.92e-15!19;UBERON:0003124!1.56e-14!7;UBERON:0001987!2.21e-09!4;UBERON:0004340!2.21e-09!4;UBERON:0000305!6.85e-08!7;UBERON:0004119!2.86e-07!169;UBERON:0000925!2.86e-07!169;UBERON:0006595!2.86e-07!169;UBERON:0000072!3.79e-07!46;UBERON:0004923!7.66e-07!57;UBERON:0000476!7.98e-07!3;UBERON:0000920!7.98e-07!3;UBERON:0004871!8.01e-07!8;UBERON:0000077!8.90e-07!130|ontology_enrichment_uberon_v019=UBERON:0001737;7.44e-36;9!UBERON:0001557;7.44e-36;9!UBERON:0000478;4.66e-29;24!UBERON:0005631;1.81e-21;10!UBERON:0000158;1.81e-21;10!UBERON:0001987;1.99e-18;4!UBERON:0000305;5.35e-16;7!UBERON:0000072;1.22e-10;37!UBERON:0005406;1.10e-09;2!UBERON:0000065;2.09e-08;44!UBERON:0001004;1.57e-07;65!UBERON:0003124;3.73e-07;3!UBERON:0000920;3.73e-07;3!UBERON:0001723;5.65e-07;3!UBERON:0001033;5.65e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.18e-37,14;UBERON:0000158,3.18e-37,14;UBERON:0001737,2.60e-36,9;UBERON:0000478,3.93e-29,24;UBERON:0001557,7.42e-25,19;UBERON:0003124,4.09e-23,7;UBERON:0001987,1.82e-18,4;UBERON:0004340,1.82e-18,4;UBERON:0000305,4.25e-16,7;UBERON:0004871,4.75e-14,8;UBERON:0000072,1.57e-12,47;UBERON:0000065,1.49e-10,54;UBERON:0005406,8.08e-10,2;UBERON:0004119,8.80e-10,160;UBERON:0000925,8.80e-10,160;UBERON:0006595,8.80e-10,160;UBERON:0008947,2.90e-09,38;UBERON:0003258,2.90e-09,38;UBERON:0004923,1.32e-08,66;UBERON:0001004,2.77e-08,74;UBERON:0001041,8.96e-08,87;UBERON:0000920,3.63e-07,3;UBERON:0001723,6.74e-07,3;UBERON:0001033,6.74e-07,3;UBERON:0010056,6.74e-07,3|phase1_expression=0,0,0,0,0,2.61701557230111,0,0,0,0,0,1.96597234917155,7.3854753903967,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,8.06646294271999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,1.77460200059766,1.85443159085912,2.89213235860178,1.43382164552112,1.30727666455444,2.37270619111097,2.83145747136345,1.56977172100277,1.92373578473195,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,13.0229185293946,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,1.02943027143257,0,0,0,19.4001645725606,14.9791895559447,2.72151263996712,0,0,0.841980283299221,0,0,0,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.386682873168488,0.462145851343933,0.15350367472613,0.964856007391714,0.322260734604821,0.580066775656914,0.340906509664404,1.69160867728801,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,2.56763392820352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.491245205065606,0,0,0,0,0,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,3.81991175580304,11.2846578716403,19.3511242322516,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,1.16684937732704,1.4124158349861,5.42301971544263,0.183195186803725,19.7222867126895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,3.39676336289621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472091293214983,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=Q9UHT2 | |||
|association_with_transcript=-69bp_to_AF118081_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_9_at_AF118081_5end | |||
|id=chr11:2018395..2018415,+ | |||
|ontology_enrichment_celltype=CL:0000188!9.91e-12!9;CL:0000349!1.52e-07!3;CL:0002577!1.52e-07!3;CL:0002541!7.98e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.87e-27;19!CL:0002577;1.85e-14;3!CL:0002536;1.12e-09;2!CL:0002537;6.48e-09;5!CL:0002541;3.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.30e-27,19;CL:0002577,1.69e-14,3;CL:0002536,7.73e-10,2;CL:0002537,6.66e-09,5;CL:0002541,3.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.44e-12;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.36e-20!14;UBERON:0000158!3.36e-20!14;UBERON:0001737!1.33e-17!9;UBERON:0000478!9.96e-17!24;UBERON:0001557!3.92e-15!19;UBERON:0003124!1.56e-14!7;UBERON:0001987!2.21e-09!4;UBERON:0004340!2.21e-09!4;UBERON:0000305!6.85e-08!7;UBERON:0004119!2.86e-07!169;UBERON:0000925!2.86e-07!169;UBERON:0006595!2.86e-07!169;UBERON:0000072!3.79e-07!46;UBERON:0004923!7.66e-07!57;UBERON:0000476!7.98e-07!3;UBERON:0000920!7.98e-07!3;UBERON:0004871!8.01e-07!8;UBERON:0000077!8.90e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.44e-36;9!UBERON:0001557;7.44e-36;9!UBERON:0000478;4.66e-29;24!UBERON:0005631;1.81e-21;10!UBERON:0000158;1.81e-21;10!UBERON:0001987;1.99e-18;4!UBERON:0000305;5.35e-16;7!UBERON:0000072;1.22e-10;37!UBERON:0005406;1.10e-09;2!UBERON:0000065;2.09e-08;44!UBERON:0001004;1.57e-07;65!UBERON:0003124;3.73e-07;3!UBERON:0000920;3.73e-07;3!UBERON:0001723;5.65e-07;3!UBERON:0001033;5.65e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.18e-37,14;UBERON:0000158,3.18e-37,14;UBERON:0001737,2.60e-36,9;UBERON:0000478,3.93e-29,24;UBERON:0001557,7.42e-25,19;UBERON:0003124,4.09e-23,7;UBERON:0001987,1.82e-18,4;UBERON:0004340,1.82e-18,4;UBERON:0000305,4.25e-16,7;UBERON:0004871,4.75e-14,8;UBERON:0000072,1.57e-12,47;UBERON:0000065,1.49e-10,54;UBERON:0005406,8.08e-10,2;UBERON:0004119,8.80e-10,160;UBERON:0000925,8.80e-10,160;UBERON:0006595,8.80e-10,160;UBERON:0008947,2.90e-09,38;UBERON:0003258,2.90e-09,38;UBERON:0004923,1.32e-08,66;UBERON:0001004,2.77e-08,74;UBERON:0001041,8.96e-08,87;UBERON:0000920,3.63e-07,3;UBERON:0001723,6.74e-07,3;UBERON:0001033,6.74e-07,3;UBERON:0010056,6.74e-07,3 | |||
|phase1_expression=0,0,0,0,0,2.61701557230111,0,0,0,0,0,1.96597234917155,7.3854753903967,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,8.06646294271999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,1.77460200059766,1.85443159085912,2.89213235860178,1.43382164552112,1.30727666455444,2.37270619111097,2.83145747136345,1.56977172100277,1.92373578473195,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,13.0229185293946,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,1.02943027143257,0,0,0,19.4001645725606,14.9791895559447,2.72151263996712,0,0,0.841980283299221,0,0,0,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.386682873168488,0.462145851343933,0.15350367472613,0.964856007391714,0.322260734604821,0.580066775656914,0.340906509664404,1.69160867728801,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,2.56763392820352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.491245205065606,0,0,0,0,0,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,3.81991175580304,11.2846578716403,19.3511242322516,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,1.16684937732704,1.4124158349861,5.42301971544263,0.183195186803725,19.7222867126895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,3.39676336289621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472091293214983,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0.646948868380091,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.183428598521679,2.07946199070609,0,0,0,0,0,0,3.92860041722134,0,0.147856086217045,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,2.57236873471653,0,0,0,0,0,0,0.078493092850514,0,0,5.47895232305697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923965261706223,2.3196288626764,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0,0,0,1.61693751166575,0.217716747896961,18.8228315596905,0.134704106029175,0,4.9899053481902,0,0,0,0,2.34640942403454,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p9@AF118081 | |||
}} |
Revision as of 17:09, 10 September 2013
Short description: | p9@AF118081 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_AF118081_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -69bp_to_AF118081_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.30e-27 | 19 |
placental epithelial cell | 1.69e-14 | 3 |
amniotic epithelial cell | 7.73e-10 | 2 |
amnion mesenchymal stem cell | 6.66e-09 | 5 |
chorionic membrane mesenchymal stem cell | 3.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.18e-37 | 14 |
membranous layer | 3.18e-37 | 14 |
larynx | 2.60e-36 | 9 |
extraembryonic structure | 3.93e-29 | 24 |
upper respiratory tract | 7.42e-25 | 19 |
chorion | 4.09e-23 | 7 |
placenta | 1.82e-18 | 4 |
allantois | 1.82e-18 | 4 |
amnion | 4.25e-16 | 7 |
somatic layer of lateral plate mesoderm | 4.75e-14 | 8 |
segment of respiratory tract | 1.57e-12 | 47 |
respiratory tract | 1.49e-10 | 54 |
perirenal fat | 8.08e-10 | 2 |
endoderm-derived structure | 8.80e-10 | 160 |
endoderm | 8.80e-10 | 160 |
presumptive endoderm | 8.80e-10 | 160 |
respiratory primordium | 2.90e-09 | 38 |
endoderm of foregut | 2.90e-09 | 38 |
organ component layer | 1.32e-08 | 66 |
respiratory system | 2.77e-08 | 74 |
foregut | 8.96e-08 | 87 |
egg chorion | 3.63e-07 | 3 |
tongue | 6.74e-07 | 3 |
gustatory system | 6.74e-07 | 3 |
future tongue | 6.74e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.