FFCP PHASE1:Hg19::chr11:60934937..60934949,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C6|description=CAGE_peak_at_chr11:60934937..60934949,-|id=chr11:60934937..60934949,-|ontology_enrichment_celltype=CL:0002057!5.19e-61!42;CL:0000860!2.67e-56!45;CL:0002009!8.59e-52!65;CL:0002194!1.40e-50!63;CL:0000576!1.40e-50!63;CL:0000040!1.40e-50!63;CL:0000559!1.40e-50!63;CL:0000766!6.21e-48!76;CL:0000557!1.50e-46!71;CL:0000839!1.59e-44!70;CL:0000763!2.21e-34!112;CL:0000049!2.21e-34!112;CL:0000738!1.19e-29!140;CL:0002087!4.51e-28!119;CL:0002031!1.29e-23!124;CL:0000037!4.27e-23!172;CL:0000566!4.27e-23!172;CL:0000988!3.75e-21!182;CL:0002032!8.36e-21!165;CL:0000837!8.36e-21!165;CL:0000767!8.13e-09!3;CL:0000842!2.72e-08!3;CL:0002393!9.17e-08!9;CL:0002397!9.17e-08!9|ontology_enrichment_celltype_v019=CL:0000860;2.32e-57;33!CL:0002057;2.32e-57;33!CL:0000473;2.42e-52;39!CL:0000234;2.42e-52;39!CL:0000576;1.17e-37;48!CL:0000766;4.46e-29;69!CL:0000763;5.53e-12;100!CL:0002393;3.33e-11;6!CL:0002397;3.33e-11;6!CL:0000039;3.63e-09;7!CL:0000586;3.63e-09;7!CL:0002087;5.54e-09;104|ontology_enrichment_celltype_v019_2=CL:0000473,6.64e-70,48;CL:0000234,6.64e-70,48;CL:0000860,9.22e-67,42;CL:0002057,9.22e-67,42;CL:0002009,3.98e-58,61;CL:0002194,4.44e-55,59;CL:0000576,4.44e-55,59;CL:0000040,4.44e-55,59;CL:0000559,4.44e-55,59;CL:0000557,1.30e-52,67;CL:0000839,7.02e-49,66;CL:0000766,1.27e-48,72;CL:0000763,5.08e-34,108;CL:0000049,5.08e-34,108;CL:0002031,1.25e-27,120;CL:0002087,2.10e-26,115;CL:0000738,3.92e-26,136;CL:0002032,2.18e-21,161;CL:0000837,2.18e-21,161;CL:0000037,2.61e-20,168;CL:0000988,4.78e-19,177;CL:0000039,4.18e-09,7;CL:0000586,4.18e-09,7;CL:0002393,1.22e-07,9;CL:0002397,1.22e-07,9;CL:0000134,3.53e-07,354;CL:0002320,6.03e-07,361|ontology_enrichment_development_v019=CL:0002057;3.02e-50;42!CL:0000049;6.36e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.74e-42!102;UBERON:0003061!1.74e-42!102;UBERON:0002371!3.76e-40!80;UBERON:0002193!1.28e-39!112;UBERON:0001474!1.26e-36!86;UBERON:0002405!1.05e-32!115;UBERON:0004765!1.22e-29!101;UBERON:0001434!1.22e-29!101;UBERON:0003081!1.33e-15!216;UBERON:0002204!6.58e-14!167;UBERON:0000926!2.51e-07!448;UBERON:0004120!2.51e-07!448;UBERON:0006603!2.51e-07!448|ontology_enrichment_uberon_v019=UBERON:0000473;4.45e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.93e-46,76;UBERON:0001474,2.59e-42,82;UBERON:0004765,3.32e-38,90;UBERON:0002405,7.61e-37,93;UBERON:0002390,9.25e-35,98;UBERON:0003061,9.25e-35,98;UBERON:0001434,5.53e-34,100;UBERON:0002193,3.66e-31,108;UBERON:0002204,1.24e-18,167;UBERON:0003081,1.54e-14,203;UBERON:0000926,9.94e-11,315;UBERON:0004120,9.94e-11,315;UBERON:0006603,9.94e-11,315;UBERON:0000473,5.03e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.464448369948228,0,0,0,0,0,0,4.43196326825502,4.61252229181326,3.90619567288533,0,0.32389366601898,0,0.145398238779565,0.755751887377619,1.21292030593908,3.0215774797739,3.70051099219643,3.09706370895104,1.1507695692886,1.0246428261164,0.236482229888585,1.37898272294647,1.29096936716765,1.35426486594342,0.752969358170419,1.63743690034707,0.898893937780338,1.83650335422542,0.962787081228281,1.27867425159808,0,0.598390972864896,0,2.32167390902867,0.56738522469114,0,1.00499466102697,0.521482918420201,1.52032191293582,1.21079900526674,4.41933163185078,2.84816148696796,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0241410345695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr11:60934937..60934949,- | |||
|id=chr11:60934937..60934949,- | |||
|ontology_enrichment_celltype=CL:0002057!5.19e-61!42;CL:0000860!2.67e-56!45;CL:0002009!8.59e-52!65;CL:0002194!1.40e-50!63;CL:0000576!1.40e-50!63;CL:0000040!1.40e-50!63;CL:0000559!1.40e-50!63;CL:0000766!6.21e-48!76;CL:0000557!1.50e-46!71;CL:0000839!1.59e-44!70;CL:0000763!2.21e-34!112;CL:0000049!2.21e-34!112;CL:0000738!1.19e-29!140;CL:0002087!4.51e-28!119;CL:0002031!1.29e-23!124;CL:0000037!4.27e-23!172;CL:0000566!4.27e-23!172;CL:0000988!3.75e-21!182;CL:0002032!8.36e-21!165;CL:0000837!8.36e-21!165;CL:0000767!8.13e-09!3;CL:0000842!2.72e-08!3;CL:0002393!9.17e-08!9;CL:0002397!9.17e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-57;33!CL:0002057;2.32e-57;33!CL:0000473;2.42e-52;39!CL:0000234;2.42e-52;39!CL:0000576;1.17e-37;48!CL:0000766;4.46e-29;69!CL:0000763;5.53e-12;100!CL:0002393;3.33e-11;6!CL:0002397;3.33e-11;6!CL:0000039;3.63e-09;7!CL:0000586;3.63e-09;7!CL:0002087;5.54e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.64e-70,48;CL:0000234,6.64e-70,48;CL:0000860,9.22e-67,42;CL:0002057,9.22e-67,42;CL:0002009,3.98e-58,61;CL:0002194,4.44e-55,59;CL:0000576,4.44e-55,59;CL:0000040,4.44e-55,59;CL:0000559,4.44e-55,59;CL:0000557,1.30e-52,67;CL:0000839,7.02e-49,66;CL:0000766,1.27e-48,72;CL:0000763,5.08e-34,108;CL:0000049,5.08e-34,108;CL:0002031,1.25e-27,120;CL:0002087,2.10e-26,115;CL:0000738,3.92e-26,136;CL:0002032,2.18e-21,161;CL:0000837,2.18e-21,161;CL:0000037,2.61e-20,168;CL:0000988,4.78e-19,177;CL:0000039,4.18e-09,7;CL:0000586,4.18e-09,7;CL:0002393,1.22e-07,9;CL:0002397,1.22e-07,9;CL:0000134,3.53e-07,354;CL:0002320,6.03e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.02e-50;42!CL:0000049;6.36e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.74e-42!102;UBERON:0003061!1.74e-42!102;UBERON:0002371!3.76e-40!80;UBERON:0002193!1.28e-39!112;UBERON:0001474!1.26e-36!86;UBERON:0002405!1.05e-32!115;UBERON:0004765!1.22e-29!101;UBERON:0001434!1.22e-29!101;UBERON:0003081!1.33e-15!216;UBERON:0002204!6.58e-14!167;UBERON:0000926!2.51e-07!448;UBERON:0004120!2.51e-07!448;UBERON:0006603!2.51e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.45e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.93e-46,76;UBERON:0001474,2.59e-42,82;UBERON:0004765,3.32e-38,90;UBERON:0002405,7.61e-37,93;UBERON:0002390,9.25e-35,98;UBERON:0003061,9.25e-35,98;UBERON:0001434,5.53e-34,100;UBERON:0002193,3.66e-31,108;UBERON:0002204,1.24e-18,167;UBERON:0003081,1.54e-14,203;UBERON:0000926,9.94e-11,315;UBERON:0004120,9.94e-11,315;UBERON:0006603,9.94e-11,315;UBERON:0000473,5.03e-08,8 | |||
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|short_description=p@chr11:60934937..60934949,- | |||
}} |
Revision as of 18:22, 10 September 2013
Short description: | p@chr11:60934937..60934949, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:60934937..60934949, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.64e-70 | 48 |
phagocyte | 6.64e-70 | 48 |
classical monocyte | 9.22e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.22e-67 | 42 |
macrophage dendritic cell progenitor | 3.98e-58 | 61 |
monopoietic cell | 4.44e-55 | 59 |
monocyte | 4.44e-55 | 59 |
monoblast | 4.44e-55 | 59 |
promonocyte | 4.44e-55 | 59 |
granulocyte monocyte progenitor cell | 1.30e-52 | 67 |
myeloid lineage restricted progenitor cell | 7.02e-49 | 66 |
myeloid leukocyte | 1.27e-48 | 72 |
myeloid cell | 5.08e-34 | 108 |
common myeloid progenitor | 5.08e-34 | 108 |
hematopoietic lineage restricted progenitor cell | 1.25e-27 | 120 |
nongranular leukocyte | 2.10e-26 | 115 |
leukocyte | 3.92e-26 | 136 |
hematopoietic oligopotent progenitor cell | 2.18e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-21 | 161 |
hematopoietic stem cell | 2.61e-20 | 168 |
hematopoietic cell | 4.78e-19 | 177 |
germ line cell | 4.18e-09 | 7 |
germ cell | 4.18e-09 | 7 |
intermediate monocyte | 1.22e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.22e-07 | 9 |
mesenchymal cell | 3.53e-07 | 354 |
connective tissue cell | 6.03e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.93e-46 | 76 |
bone element | 2.59e-42 | 82 |
skeletal element | 3.32e-38 | 90 |
immune system | 7.61e-37 | 93 |
hematopoietic system | 9.25e-35 | 98 |
blood island | 9.25e-35 | 98 |
skeletal system | 5.53e-34 | 100 |
hemolymphoid system | 3.66e-31 | 108 |
musculoskeletal system | 1.24e-18 | 167 |
lateral plate mesoderm | 1.54e-14 | 203 |
mesoderm | 9.94e-11 | 315 |
mesoderm-derived structure | 9.94e-11 | 315 |
presumptive mesoderm | 9.94e-11 | 315 |
testis | 5.03e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.