FFCP PHASE1:Hg19::chr11:64527390..64527404,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5837|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9726|TSSclassifier=S|UniProt=A6NDY6,F5GZH7|association_with_transcript=41bp_to_ENST00000377432,ENST00000540450_5end|coexpression_cluster_id=C31|description=CAGE_peak_3_at_PYGM_5end|id=chr11:64527390..64527404,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002586;3.43e-07;3|ontology_enrichment_celltype_v019_2=CL:0002586,2.55e-07,3|ontology_enrichment_development_v019=UBERON:0006965;2.23e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.72e-51!115;UBERON:0003075!5.13e-18!86;UBERON:0007284!5.13e-18!86;UBERON:0002346!1.28e-16!90;UBERON:0005743!4.84e-16!86;UBERON:0000073!2.33e-14!94;UBERON:0001016!2.33e-14!94;UBERON:0001049!1.38e-13!57;UBERON:0005068!1.38e-13!57;UBERON:0006241!1.38e-13!57;UBERON:0007135!1.38e-13!57;UBERON:0001017!5.82e-13!82;UBERON:0002616!8.74e-12!59;UBERON:0003056!3.07e-11!61;UBERON:0000955!2.80e-10!69;UBERON:0006238!2.80e-10!69;UBERON:0002780!5.25e-10!41;UBERON:0001890!5.25e-10!41;UBERON:0006240!5.25e-10!41;UBERON:0000153!6.41e-10!129;UBERON:0007811!6.41e-10!129;UBERON:0003080!1.26e-09!42;UBERON:0004121!3.02e-09!169;UBERON:0000033!6.55e-09!123;UBERON:0000924!1.03e-08!173;UBERON:0006601!1.03e-08!173;UBERON:0002020!1.95e-08!34;UBERON:0003528!1.95e-08!34;UBERON:0001893!2.45e-08!34;UBERON:0000481!2.46e-08!347;UBERON:0001869!4.18e-08!32;UBERON:0002791!9.02e-08!33;UBERON:0000483!2.31e-07!309;UBERON:0000119!4.09e-07!312;UBERON:0002619!7.16e-07!22;UBERON:0003135!7.50e-07!11|ontology_enrichment_uberon_v019=UBERON:0005090;3.63e-11;2!UBERON:0001630;3.63e-11;2!UBERON:0000341;6.23e-11;2!UBERON:0000966;6.45e-09;5!UBERON:0005388;6.45e-09;5!UBERON:0001802;6.45e-09;5!UBERON:0001723;8.39e-08;3!UBERON:0001033;8.39e-08;3!UBERON:0004151;2.04e-07;3!UBERON:0001781;3.43e-07;3!UBERON:0001782;3.43e-07;3!UBERON:0000948;4.10e-07;22!UBERON:0006947;5.72e-07;3!UBERON:0004054;5.72e-07;3!UBERON:0000020;6.55e-07;23|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.16e-12,114;UBERON:0005090,3.64e-11,2;UBERON:0001630,3.64e-11,2;UBERON:0000341,5.13e-11,2;UBERON:0001723,8.27e-08,3;UBERON:0001033,8.27e-08,3;UBERON:0010056,8.27e-08,3;UBERON:0000966,1.09e-07,6;UBERON:0005388,1.09e-07,6;UBERON:0001802,1.09e-07,6;UBERON:0004151,2.04e-07,3;UBERON:0001782,2.55e-07,3;UBERON:0005424,2.55e-07,3;UBERON:0006947,4.34e-07,3;UBERON:0004054,4.34e-07,3|phase1_expression=0,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.487894824518382,1.06023814657188,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.736148950314839,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56450125116389,1.64007322849853,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.751941714077915,0.290033387828457,0.170453254832202,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.422008249231538,0,0,0,1.39473591775749,0.276283915531148,0,0,0,0,0,0,0,1.08507746200627,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.438770794307945,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0.269604531922708,13.6438200040794,0.468528891450678,0,0,0,1.57833761139756,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.969890164884194,0,1.12990370390266,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,2.06244381610515,0.717873024576814,0.399358000997982,0.858452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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9726 | |||
|TSSclassifier=S | |||
|UniProt=A6NDY6,F5GZH7 | |||
|association_with_transcript=41bp_to_ENST00000377432,ENST00000540450_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_3_at_PYGM_5end | |||
|id=chr11:64527390..64527404,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.43e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.55e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.23e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.72e-51!115;UBERON:0003075!5.13e-18!86;UBERON:0007284!5.13e-18!86;UBERON:0002346!1.28e-16!90;UBERON:0005743!4.84e-16!86;UBERON:0000073!2.33e-14!94;UBERON:0001016!2.33e-14!94;UBERON:0001049!1.38e-13!57;UBERON:0005068!1.38e-13!57;UBERON:0006241!1.38e-13!57;UBERON:0007135!1.38e-13!57;UBERON:0001017!5.82e-13!82;UBERON:0002616!8.74e-12!59;UBERON:0003056!3.07e-11!61;UBERON:0000955!2.80e-10!69;UBERON:0006238!2.80e-10!69;UBERON:0002780!5.25e-10!41;UBERON:0001890!5.25e-10!41;UBERON:0006240!5.25e-10!41;UBERON:0000153!6.41e-10!129;UBERON:0007811!6.41e-10!129;UBERON:0003080!1.26e-09!42;UBERON:0004121!3.02e-09!169;UBERON:0000033!6.55e-09!123;UBERON:0000924!1.03e-08!173;UBERON:0006601!1.03e-08!173;UBERON:0002020!1.95e-08!34;UBERON:0003528!1.95e-08!34;UBERON:0001893!2.45e-08!34;UBERON:0000481!2.46e-08!347;UBERON:0001869!4.18e-08!32;UBERON:0002791!9.02e-08!33;UBERON:0000483!2.31e-07!309;UBERON:0000119!4.09e-07!312;UBERON:0002619!7.16e-07!22;UBERON:0003135!7.50e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;3.63e-11;2!UBERON:0001630;3.63e-11;2!UBERON:0000341;6.23e-11;2!UBERON:0000966;6.45e-09;5!UBERON:0005388;6.45e-09;5!UBERON:0001802;6.45e-09;5!UBERON:0001723;8.39e-08;3!UBERON:0001033;8.39e-08;3!UBERON:0004151;2.04e-07;3!UBERON:0001781;3.43e-07;3!UBERON:0001782;3.43e-07;3!UBERON:0000948;4.10e-07;22!UBERON:0006947;5.72e-07;3!UBERON:0004054;5.72e-07;3!UBERON:0000020;6.55e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.16e-12,114;UBERON:0005090,3.64e-11,2;UBERON:0001630,3.64e-11,2;UBERON:0000341,5.13e-11,2;UBERON:0001723,8.27e-08,3;UBERON:0001033,8.27e-08,3;UBERON:0010056,8.27e-08,3;UBERON:0000966,1.09e-07,6;UBERON:0005388,1.09e-07,6;UBERON:0001802,1.09e-07,6;UBERON:0004151,2.04e-07,3;UBERON:0001782,2.55e-07,3;UBERON:0005424,2.55e-07,3;UBERON:0006947,4.34e-07,3;UBERON:0004054,4.34e-07,3 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.487894824518382,1.06023814657188,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.736148950314839,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56450125116389,1.64007322849853,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.751941714077915,0.290033387828457,0.170453254832202,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.422008249231538,0,0,0,1.39473591775749,0.276283915531148,0,0,0,0,0,0,0,1.08507746200627,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.438770794307945,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0.269604531922708,13.6438200040794,0.468528891450678,0,0,0,1.57833761139756,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.969890164884194,0,1.12990370390266,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,2.06244381610515,0.717873024576814,0.399358000997982,0.858452096273142,0.669514372325618,1.34366944973453,0,0,0,0,0,0,0,0,1.49823746722733,0,0.550157746388935,0.83088067605837,0,0,0.607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,2.1440859791201,2.64836788146173,0,0,0,0,0,0,0,0,0.146552233678082,0,0.775697738169303,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0.496166021811951,0,0,0,2.1760712134779,2.506898940227,3.36980134439808,2.95085367638824,0,1.77213635993397,0,0.500763722825999,1.14681839138014,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.428883182749851,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0.0788617450012534,0,0,0,0.513833800771676,0,0,0,0,0.553258019713743,0.322951291263702,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.202612753855184,0.781078098613847,0.826747186004736,0.507326481551255,0,1.09651553371436,7.93937885422871,0,0,1.07140367175657,0.672567444437648,0,0,0.177404740325278,0,0,0.40781839786099,0.460409414939944,0,0,0.78493092850514,0.157115589916002,0,0,0,0,1.92986669276972,0,2.09234565662625,1.04314963381548,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,3.88457302312737,11.4982343678997,9.27851545070559,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,0,0,2.20633489578515,0,0.785233868459781,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0.5290268405154,0,0,0,0.504665699340316,0.109265571963696,0.760191006068622,0.101988829741982,0.26721740526556,0,0,0.833565680400634,0.535928260312357,0,0.20686599172379,8.9558272398412,2.85677317756488,0,0.0620747142958579,0,0.190941474834495,0.404234377916439,12.1921378822298,13.6893320434112,0.404112318087525,0.286888821570705,1.99596213927608,0,0,0,0,0,0.244482888365733,0,0,2.41528552309231,0 | |||
|short_description=p3@PYGM | |||
}} |
Revision as of 18:48, 10 September 2013
Short description: | p3@PYGM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PYGM_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 41bp_to_ENST00000377432, ENST00000540450_5end |
EntrezGene: | PYGM |
HGNC: | 9726 |
UniProt: | A6NDY6F5GZH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.16e-12 | 114 |
muscle structure | 3.64e-11 | 2 |
muscle organ | 3.64e-11 | 2 |
throat | 5.13e-11 | 2 |
tongue | 8.27e-08 | 3 |
gustatory system | 8.27e-08 | 3 |
future tongue | 8.27e-08 | 3 |
retina | 1.09e-07 | 6 |
photoreceptor array | 1.09e-07 | 6 |
posterior segment of eyeball | 1.09e-07 | 6 |
cardiac chamber | 2.04e-07 | 3 |
pigmented layer of retina | 2.55e-07 | 3 |
presumptive retinal pigmented epithelium | 2.55e-07 | 3 |
male genital duct | 4.34e-07 | 3 |
internal male genitalia | 4.34e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.