FFCP PHASE1:Hg19::chr11:75140966..75140979,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283212|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26597|TSSclassifier=S|UniProt=|association_with_transcript=127bp_to_ENST00000460787_5end|coexpression_cluster_id=C2165|description=CAGE_peak_7_at_KLHL35_5end|id=chr11:75140966..75140979,-|ontology_enrichment_celltype=CL:0002541!1.63e-12!3;CL:0002535!7.85e-10!2|ontology_enrichment_celltype_v019=CL:0002535;6.99e-45;2!CL:0002253;1.96e-12;2!CL:0000322;1.30e-08;3!CL:0002231;1.30e-08;3!CL:0002563;7.48e-07;4!CL:0002327;9.10e-07;4|ontology_enrichment_celltype_v019_2=CL:0002535,5.00e-45,2;CL:0002253,1.85e-12,2;CL:0002231,1.40e-08,3;CL:0000322,1.51e-08,3;CL:0002563,7.27e-07,4;CL:0002327,9.11e-07,4|ontology_enrichment_development_v019=UBERON:0008425;4.10e-23;1|ontology_enrichment_disease=DOID:4362!2.46e-08!5|ontology_enrichment_disease_v019=DOID:178;4.10e-23;1!DOID:326;4.10e-23;1!DOID:3978;4.10e-23;1!DOID:3394;4.10e-23;1!DOID:5844;4.10e-23;1!DOID:4362;1.18e-18;5!DOID:114;2.90e-12;2!DOID:3910;2.90e-12;2!DOID:1287;9.10e-07;4!DOID:5093;9.10e-07;4!DOID:1612;9.10e-07;4|ontology_enrichment_disease_v019_2=DOID:178,2.62e-23,1;DOID:326,2.62e-23,1;DOID:3978,2.62e-23,1;DOID:3394,2.62e-23,1;DOID:5844,2.62e-23,1;DOID:4362,1.04e-18,5;DOID:114,2.32e-12,2;DOID:3910,3.62e-12,2;DOID:305,1.79e-07,106;DOID:1287,8.14e-07,4;DOID:5093,9.11e-07,4;DOID:1612,9.11e-07,4|ontology_enrichment_uberon=UBERON:0000476!1.63e-12!3;UBERON:0000920!1.63e-12!3;UBERON:0001049!1.03e-11!57;UBERON:0005068!1.03e-11!57;UBERON:0006241!1.03e-11!57;UBERON:0007135!1.03e-11!57;UBERON:0002780!8.01e-11!41;UBERON:0001890!8.01e-11!41;UBERON:0006240!8.01e-11!41;UBERON:0003080!1.63e-10!42;UBERON:0006955!7.85e-10!2;UBERON:0004801!7.85e-10!2;UBERON:0001869!9.76e-10!32;UBERON:0002616!1.34e-09!59;UBERON:0001017!1.94e-09!82;UBERON:0002020!3.56e-09!34;UBERON:0003528!3.56e-09!34;UBERON:0001893!4.47e-09!34;UBERON:0000955!6.34e-09!69;UBERON:0006238!6.34e-09!69;UBERON:0005743!7.69e-09!86;UBERON:0000473!4.87e-08!8;UBERON:0003075!8.03e-08!86;UBERON:0007284!8.03e-08!86;UBERON:0000073!1.11e-07!94;UBERON:0001016!1.11e-07!94;UBERON:0002791!1.21e-07!33;UBERON:0002346!2.49e-07!90;UBERON:0002308!3.90e-07!9;UBERON:0000125!3.90e-07!9;UBERON:0002420!4.91e-07!9;UBERON:0007245!4.91e-07!9;UBERON:0010009!4.91e-07!9;UBERON:0010011!4.91e-07!9;UBERON:0000454!4.91e-07!9;UBERON:0000002!5.28e-07!6;UBERON:0001560!5.28e-07!6;UBERON:0007023!8.10e-07!115|ontology_enrichment_uberon_v019=UBERON:0006955;6.99e-45;2!UBERON:0004801;6.99e-45;2!UBERON:0000002;1.01e-15;6!UBERON:0001560;1.01e-15;6!UBERON:0004903;2.90e-12;2!UBERON:0002173;2.90e-12;2!UBERON:0002186;2.90e-12;2!UBERON:0004821;1.30e-08;3!UBERON:0007499;1.30e-08;3!UBERON:0003215;1.30e-08;3!UBERON:0010368;1.30e-08;3!UBERON:0009911;1.30e-08;3!UBERON:0002299;1.30e-08;3!UBERON:0006524;1.30e-08;3!UBERON:0008874;1.30e-08;3!UBERON:0002169;1.30e-08;3!UBERON:0004894;1.30e-08;3!UBERON:0001052;7.48e-07;4!UBERON:0001242;7.48e-07;4!UBERON:0001262;7.48e-07;4!UBERON:0004786;7.48e-07;4!UBERON:0004808;7.48e-07;4!UBERON:0001277;7.48e-07;4!UBERON:0001911;9.10e-07;4!UBERON:0009856;9.10e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.00e-45,2;UBERON:0004801,5.00e-45,2;UBERON:0000002,9.04e-16,6;UBERON:0001560,9.04e-16,6;UBERON:0004903,3.62e-12,2;UBERON:0002173,3.62e-12,2;UBERON:0002186,3.62e-12,2;UBERON:0004821,1.51e-08,3;UBERON:0003215,1.51e-08,3;UBERON:0010368,1.51e-08,3;UBERON:0009911,1.51e-08,3;UBERON:0002299,1.51e-08,3;UBERON:0006524,1.51e-08,3;UBERON:0008874,1.51e-08,3;UBERON:0002169,1.51e-08,3;UBERON:0004894,1.51e-08,3;UBERON:0001052,7.27e-07,4;UBERON:0001242,7.27e-07,4;UBERON:0001262,7.27e-07,4;UBERON:0004786,7.27e-07,4;UBERON:0004808,7.27e-07,4;UBERON:0001277,7.27e-07,4;UBERON:0001911,9.11e-07,4;UBERON:0005333,9.11e-07,4;UBERON:0008425,9.11e-07,4;UBERON:0005311,9.11e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,1.76352923497993,0,0,0.311039587661807,0,0,0,0,0,0,0,0.18553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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283212 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26597 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=127bp_to_ENST00000460787_5end | |||
|coexpression_cluster_id=C2165 | |||
|description=CAGE_peak_7_at_KLHL35_5end | |||
|id=chr11:75140966..75140979,- | |||
|ontology_enrichment_celltype=CL:0002541!1.63e-12!3;CL:0002535!7.85e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;6.99e-45;2!CL:0002253;1.96e-12;2!CL:0000322;1.30e-08;3!CL:0002231;1.30e-08;3!CL:0002563;7.48e-07;4!CL:0002327;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.00e-45,2;CL:0002253,1.85e-12,2;CL:0002231,1.40e-08,3;CL:0000322,1.51e-08,3;CL:0002563,7.27e-07,4;CL:0002327,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;4.10e-23;1 | |||
|ontology_enrichment_disease=DOID:4362!2.46e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:178;4.10e-23;1!DOID:326;4.10e-23;1!DOID:3978;4.10e-23;1!DOID:3394;4.10e-23;1!DOID:5844;4.10e-23;1!DOID:4362;1.18e-18;5!DOID:114;2.90e-12;2!DOID:3910;2.90e-12;2!DOID:1287;9.10e-07;4!DOID:5093;9.10e-07;4!DOID:1612;9.10e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.62e-23,1;DOID:326,2.62e-23,1;DOID:3978,2.62e-23,1;DOID:3394,2.62e-23,1;DOID:5844,2.62e-23,1;DOID:4362,1.04e-18,5;DOID:114,2.32e-12,2;DOID:3910,3.62e-12,2;DOID:305,1.79e-07,106;DOID:1287,8.14e-07,4;DOID:5093,9.11e-07,4;DOID:1612,9.11e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.63e-12!3;UBERON:0000920!1.63e-12!3;UBERON:0001049!1.03e-11!57;UBERON:0005068!1.03e-11!57;UBERON:0006241!1.03e-11!57;UBERON:0007135!1.03e-11!57;UBERON:0002780!8.01e-11!41;UBERON:0001890!8.01e-11!41;UBERON:0006240!8.01e-11!41;UBERON:0003080!1.63e-10!42;UBERON:0006955!7.85e-10!2;UBERON:0004801!7.85e-10!2;UBERON:0001869!9.76e-10!32;UBERON:0002616!1.34e-09!59;UBERON:0001017!1.94e-09!82;UBERON:0002020!3.56e-09!34;UBERON:0003528!3.56e-09!34;UBERON:0001893!4.47e-09!34;UBERON:0000955!6.34e-09!69;UBERON:0006238!6.34e-09!69;UBERON:0005743!7.69e-09!86;UBERON:0000473!4.87e-08!8;UBERON:0003075!8.03e-08!86;UBERON:0007284!8.03e-08!86;UBERON:0000073!1.11e-07!94;UBERON:0001016!1.11e-07!94;UBERON:0002791!1.21e-07!33;UBERON:0002346!2.49e-07!90;UBERON:0002308!3.90e-07!9;UBERON:0000125!3.90e-07!9;UBERON:0002420!4.91e-07!9;UBERON:0007245!4.91e-07!9;UBERON:0010009!4.91e-07!9;UBERON:0010011!4.91e-07!9;UBERON:0000454!4.91e-07!9;UBERON:0000002!5.28e-07!6;UBERON:0001560!5.28e-07!6;UBERON:0007023!8.10e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;6.99e-45;2!UBERON:0004801;6.99e-45;2!UBERON:0000002;1.01e-15;6!UBERON:0001560;1.01e-15;6!UBERON:0004903;2.90e-12;2!UBERON:0002173;2.90e-12;2!UBERON:0002186;2.90e-12;2!UBERON:0004821;1.30e-08;3!UBERON:0007499;1.30e-08;3!UBERON:0003215;1.30e-08;3!UBERON:0010368;1.30e-08;3!UBERON:0009911;1.30e-08;3!UBERON:0002299;1.30e-08;3!UBERON:0006524;1.30e-08;3!UBERON:0008874;1.30e-08;3!UBERON:0002169;1.30e-08;3!UBERON:0004894;1.30e-08;3!UBERON:0001052;7.48e-07;4!UBERON:0001242;7.48e-07;4!UBERON:0001262;7.48e-07;4!UBERON:0004786;7.48e-07;4!UBERON:0004808;7.48e-07;4!UBERON:0001277;7.48e-07;4!UBERON:0001911;9.10e-07;4!UBERON:0009856;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.00e-45,2;UBERON:0004801,5.00e-45,2;UBERON:0000002,9.04e-16,6;UBERON:0001560,9.04e-16,6;UBERON:0004903,3.62e-12,2;UBERON:0002173,3.62e-12,2;UBERON:0002186,3.62e-12,2;UBERON:0004821,1.51e-08,3;UBERON:0003215,1.51e-08,3;UBERON:0010368,1.51e-08,3;UBERON:0009911,1.51e-08,3;UBERON:0002299,1.51e-08,3;UBERON:0006524,1.51e-08,3;UBERON:0008874,1.51e-08,3;UBERON:0002169,1.51e-08,3;UBERON:0004894,1.51e-08,3;UBERON:0001052,7.27e-07,4;UBERON:0001242,7.27e-07,4;UBERON:0001262,7.27e-07,4;UBERON:0004786,7.27e-07,4;UBERON:0004808,7.27e-07,4;UBERON:0001277,7.27e-07,4;UBERON:0001911,9.11e-07,4;UBERON:0005333,9.11e-07,4;UBERON:0008425,9.11e-07,4;UBERON:0005311,9.11e-07,4 | |||
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|short_description=p7@KLHL35 | |||
}} |
Revision as of 19:42, 10 September 2013
Short description: | p7@KLHL35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_KLHL35_5end |
Coexpression cluster: | C2165_mesothelioma_adenocarcinoma_epidermoid_breast_colon_argyrophil_Prostate |
Association with transcript: | 127bp_to_ENST00000460787_5end |
EntrezGene: | KLHL35 |
HGNC: | 26597 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.00e-45 | 2 |
epithelial cell of large intestine | 1.85e-12 | 2 |
epithelial cell of prostate | 1.40e-08 | 3 |
pneumocyte | 1.51e-08 | 3 |
intestinal epithelial cell | 7.27e-07 | 4 |
mammary gland epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.00e-45 | 2 |
cervix epithelium | 5.00e-45 | 2 |
uterine cervix | 9.04e-16 | 6 |
neck of organ | 9.04e-16 | 6 |
bronchoalveolar duct junction | 3.62e-12 | 2 |
alveolar duct | 3.62e-12 | 2 |
bronchiole | 3.62e-12 | 2 |
pulmonary alveolus epithelium | 1.51e-08 | 3 |
alveolus | 1.51e-08 | 3 |
pulmonary lobule | 1.51e-08 | 3 |
lobule | 1.51e-08 | 3 |
alveolus of lung | 1.51e-08 | 3 |
alveolar system | 1.51e-08 | 3 |
pulmonary acinus | 1.51e-08 | 3 |
alveolar sac | 1.51e-08 | 3 |
alveolar wall | 1.51e-08 | 3 |
rectum | 7.27e-07 | 4 |
intestinal mucosa | 7.27e-07 | 4 |
wall of intestine | 7.27e-07 | 4 |
gastrointestinal system mucosa | 7.27e-07 | 4 |
gastrointestinal system epithelium | 7.27e-07 | 4 |
intestinal epithelium | 7.27e-07 | 4 |
mammary gland | 9.11e-07 | 4 |
mammary bud | 9.11e-07 | 4 |
mammary ridge | 9.11e-07 | 4 |
mammary placode | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.62e-23 | 1 |
ischemia | 2.62e-23 | 1 |
extrinsic cardiomyopathy | 2.62e-23 | 1 |
myocardial ischemia | 2.62e-23 | 1 |
myocardial infarction | 2.62e-23 | 1 |
cervical cancer | 1.04e-18 | 5 |
heart disease | 2.32e-12 | 2 |
lung adenocarcinoma | 3.62e-12 | 2 |
carcinoma | 1.79e-07 | 106 |
cardiovascular system disease | 8.14e-07 | 4 |
thoracic cancer | 9.11e-07 | 4 |
breast cancer | 9.11e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.