FFCP PHASE1:Hg19::chr13:32313685..32313699,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=122042|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17318|TSSclassifier=S|UniProt=Q8WXD0,Q3KU23|association_with_transcript=6bp_to_ENST00000298386,NM_001166058,NM_130806,uc001utt.2,uc010aba.2_5end|coexpression_cluster_id=C3364|description=CAGE_peak_2_at_RXFP2_5end|id=chr13:32313685..32313699,+|ontology_enrichment_celltype=CL:0002092!1.92e-09!10;CL:0002540!3.24e-09!6;CL:0002616!3.57e-07!1|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;1.21e-13;2!UBERON:0005795;5.55e-11;10|ontology_enrichment_disease=DOID:0060072!5.13e-14!4;DOID:0060084!5.72e-09!3;DOID:127!5.72e-09!3;DOID:0060085!3.36e-07!1;DOID:3165!3.36e-07!1;DOID:0060121!3.36e-07!1;DOID:2438!3.36e-07!1;DOID:4418!3.36e-07!1|ontology_enrichment_disease_v019=DOID:0060084;4.28e-34;3!DOID:127;4.28e-34;3!DOID:0060072;7.17e-26;4|ontology_enrichment_disease_v019_2=DOID:0060084,4.66e-34,3;DOID:127,4.66e-34,3;DOID:0060072,7.64e-26,4|ontology_enrichment_uberon=UBERON:0001869!5.25e-18!32;UBERON:0001893!7.35e-17!34;UBERON:0002791!2.16e-14!33;UBERON:0002020!6.25e-14!34;UBERON:0003528!6.25e-14!34;UBERON:0002780!1.04e-13!41;UBERON:0001890!1.04e-13!41;UBERON:0006240!1.04e-13!41;UBERON:0000369!2.01e-13!4;UBERON:0002435!2.01e-13!4;UBERON:0000204!2.01e-13!4;UBERON:0010082!2.01e-13!4;UBERON:0003080!2.42e-13!42;UBERON:0001049!2.67e-11!57;UBERON:0005068!2.67e-11!57;UBERON:0006241!2.67e-11!57;UBERON:0007135!2.67e-11!57;UBERON:0002616!7.58e-11!59;UBERON:0000349!8.29e-11!5;UBERON:0002619!9.69e-11!22;UBERON:0002420!2.40e-10!9;UBERON:0007245!2.40e-10!9;UBERON:0010009!2.40e-10!9;UBERON:0010011!2.40e-10!9;UBERON:0000454!2.40e-10!9;UBERON:0007023!2.74e-10!115;UBERON:0000956!2.11e-09!25;UBERON:0000203!2.11e-09!25;UBERON:0000955!8.17e-09!69;UBERON:0006238!8.17e-09!69;UBERON:0001950!8.39e-09!20;UBERON:0000200!1.05e-08!6;UBERON:0003056!1.23e-08!61;UBERON:0005383!1.79e-08!3;UBERON:0005382!1.79e-08!3;UBERON:0002771!2.91e-08!3;UBERON:0009663!7.22e-08!7;UBERON:0001282!2.36e-07!1;UBERON:0009842!2.36e-07!1;UBERON:0003704!2.36e-07!1;UBERON:0001171!2.36e-07!1;UBERON:0001172!2.36e-07!1;UBERON:0001301!2.82e-07!1;UBERON:0001874!2.99e-07!1;UBERON:0001882!3.78e-07!1;UBERON:0005403!3.78e-07!1;UBERON:0001017!4.17e-07!82;UBERON:0006834!5.37e-07!1;UBERON:0001871!8.38e-07!7;UBERON:0003075!8.71e-07!86;UBERON:0007284!8.71e-07!86|ontology_enrichment_uberon_v019=UBERON:0001282;4.06e-26;1!UBERON:0009842;4.06e-26;1!UBERON:0003704;4.06e-26;1!UBERON:0001171;4.06e-26;1!UBERON:0001172;4.06e-26;1!UBERON:0001301;7.62e-26;1!UBERON:0001874;9.79e-26;1!UBERON:0004175;2.39e-11;21!UBERON:0000058;6.77e-11;10!UBERON:0003135;6.63e-10;11!UBERON:0001280;1.24e-09;3!UBERON:0004647;1.24e-09;3!UBERON:0006947;1.54e-09;3!UBERON:0004054;1.54e-09;3!UBERON:0005383;1.67e-09;3!UBERON:0005382;1.67e-09;3!UBERON:0003133;1.99e-08;44!UBERON:0002394;1.54e-07;4!UBERON:0003928;1.54e-07;4!UBERON:0005904;1.80e-07;4!UBERON:0000369;1.92e-07;4!UBERON:0002435;1.92e-07;4!UBERON:0000204;1.92e-07;4!UBERON:0000995;7.76e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.58e-26,1;UBERON:0009842,3.58e-26,1;UBERON:0003704,3.58e-26,1;UBERON:0001171,3.58e-26,1;UBERON:0001172,3.58e-26,1;UBERON:0001301,7.62e-26,1;UBERON:0001874,9.79e-26,1;UBERON:0003135,6.63e-10,11;UBERON:0001280,1.19e-09,3;UBERON:0004647,1.19e-09,3;UBERON:0005171,1.19e-09,3;UBERON:0004175,1.24e-09,25;UBERON:0006947,1.54e-09,3;UBERON:0004054,1.54e-09,3;UBERON:0005383,1.67e-09,3;UBERON:0005382,1.67e-09,3;UBERON:0003133,1.10e-08,48;UBERON:0005904,1.80e-07,4;UBERON:0000369,1.92e-07,4;UBERON:0002435,1.92e-07,4;UBERON:0000204,1.92e-07,4;UBERON:0010082,1.92e-07,4;UBERON:0005156,3.93e-07,59;UBERON:0000990,3.93e-07,59|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,7.97594390929008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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=122042 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17318 | |||
|TSSclassifier=S | |||
|UniProt=Q8WXD0,Q3KU23 | |||
|association_with_transcript=6bp_to_ENST00000298386,NM_001166058,NM_130806,uc001utt.2,uc010aba.2_5end | |||
|coexpression_cluster_id=C3364 | |||
|description=CAGE_peak_2_at_RXFP2_5end | |||
|id=chr13:32313685..32313699,+ | |||
|ontology_enrichment_celltype=CL:0002092!1.92e-09!10;CL:0002540!3.24e-09!6;CL:0002616!3.57e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.21e-13;2!UBERON:0005795;5.55e-11;10 | |||
|ontology_enrichment_disease=DOID:0060072!5.13e-14!4;DOID:0060084!5.72e-09!3;DOID:127!5.72e-09!3;DOID:0060085!3.36e-07!1;DOID:3165!3.36e-07!1;DOID:0060121!3.36e-07!1;DOID:2438!3.36e-07!1;DOID:4418!3.36e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.28e-34;3!DOID:127;4.28e-34;3!DOID:0060072;7.17e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.66e-34,3;DOID:127,4.66e-34,3;DOID:0060072,7.64e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0001869!5.25e-18!32;UBERON:0001893!7.35e-17!34;UBERON:0002791!2.16e-14!33;UBERON:0002020!6.25e-14!34;UBERON:0003528!6.25e-14!34;UBERON:0002780!1.04e-13!41;UBERON:0001890!1.04e-13!41;UBERON:0006240!1.04e-13!41;UBERON:0000369!2.01e-13!4;UBERON:0002435!2.01e-13!4;UBERON:0000204!2.01e-13!4;UBERON:0010082!2.01e-13!4;UBERON:0003080!2.42e-13!42;UBERON:0001049!2.67e-11!57;UBERON:0005068!2.67e-11!57;UBERON:0006241!2.67e-11!57;UBERON:0007135!2.67e-11!57;UBERON:0002616!7.58e-11!59;UBERON:0000349!8.29e-11!5;UBERON:0002619!9.69e-11!22;UBERON:0002420!2.40e-10!9;UBERON:0007245!2.40e-10!9;UBERON:0010009!2.40e-10!9;UBERON:0010011!2.40e-10!9;UBERON:0000454!2.40e-10!9;UBERON:0007023!2.74e-10!115;UBERON:0000956!2.11e-09!25;UBERON:0000203!2.11e-09!25;UBERON:0000955!8.17e-09!69;UBERON:0006238!8.17e-09!69;UBERON:0001950!8.39e-09!20;UBERON:0000200!1.05e-08!6;UBERON:0003056!1.23e-08!61;UBERON:0005383!1.79e-08!3;UBERON:0005382!1.79e-08!3;UBERON:0002771!2.91e-08!3;UBERON:0009663!7.22e-08!7;UBERON:0001282!2.36e-07!1;UBERON:0009842!2.36e-07!1;UBERON:0003704!2.36e-07!1;UBERON:0001171!2.36e-07!1;UBERON:0001172!2.36e-07!1;UBERON:0001301!2.82e-07!1;UBERON:0001874!2.99e-07!1;UBERON:0001882!3.78e-07!1;UBERON:0005403!3.78e-07!1;UBERON:0001017!4.17e-07!82;UBERON:0006834!5.37e-07!1;UBERON:0001871!8.38e-07!7;UBERON:0003075!8.71e-07!86;UBERON:0007284!8.71e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;4.06e-26;1!UBERON:0009842;4.06e-26;1!UBERON:0003704;4.06e-26;1!UBERON:0001171;4.06e-26;1!UBERON:0001172;4.06e-26;1!UBERON:0001301;7.62e-26;1!UBERON:0001874;9.79e-26;1!UBERON:0004175;2.39e-11;21!UBERON:0000058;6.77e-11;10!UBERON:0003135;6.63e-10;11!UBERON:0001280;1.24e-09;3!UBERON:0004647;1.24e-09;3!UBERON:0006947;1.54e-09;3!UBERON:0004054;1.54e-09;3!UBERON:0005383;1.67e-09;3!UBERON:0005382;1.67e-09;3!UBERON:0003133;1.99e-08;44!UBERON:0002394;1.54e-07;4!UBERON:0003928;1.54e-07;4!UBERON:0005904;1.80e-07;4!UBERON:0000369;1.92e-07;4!UBERON:0002435;1.92e-07;4!UBERON:0000204;1.92e-07;4!UBERON:0000995;7.76e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.58e-26,1;UBERON:0009842,3.58e-26,1;UBERON:0003704,3.58e-26,1;UBERON:0001171,3.58e-26,1;UBERON:0001172,3.58e-26,1;UBERON:0001301,7.62e-26,1;UBERON:0001874,9.79e-26,1;UBERON:0003135,6.63e-10,11;UBERON:0001280,1.19e-09,3;UBERON:0004647,1.19e-09,3;UBERON:0005171,1.19e-09,3;UBERON:0004175,1.24e-09,25;UBERON:0006947,1.54e-09,3;UBERON:0004054,1.54e-09,3;UBERON:0005383,1.67e-09,3;UBERON:0005382,1.67e-09,3;UBERON:0003133,1.10e-08,48;UBERON:0005904,1.80e-07,4;UBERON:0000369,1.92e-07,4;UBERON:0002435,1.92e-07,4;UBERON:0000204,1.92e-07,4;UBERON:0010082,1.92e-07,4;UBERON:0005156,3.93e-07,59;UBERON:0000990,3.93e-07,59 | |||
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|short_description=p2@RXFP2 | |||
}} |
Revision as of 02:01, 11 September 2013
Short description: | p2@RXFP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RXFP2_5end |
Coexpression cluster: | C3364_mesenchymal_leiomyoma_cholangiocellular_epididymis_hairy_putamen_uterus |
Association with transcript: | 6bp_to_ENST00000298386, NM_001166058, NM_130806, uc001utt.2, uc010aba.2_5end |
EntrezGene: | RXFP2 |
HGNC: | 17318 |
UniProt: | Q8WXD0Q3KU23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.58e-26 | 1 |
acinus | 3.58e-26 | 1 |
intrahepatic bile duct | 3.58e-26 | 1 |
portal lobule | 3.58e-26 | 1 |
hepatic acinus | 3.58e-26 | 1 |
epididymis | 7.62e-26 | 1 |
putamen | 9.79e-26 | 1 |
male reproductive organ | 6.63e-10 | 11 |
liver parenchyma | 1.19e-09 | 3 |
liver lobule | 1.19e-09 | 3 |
hepatic duct | 1.19e-09 | 3 |
internal genitalia | 1.24e-09 | 25 |
male genital duct | 1.54e-09 | 3 |
internal male genitalia | 1.54e-09 | 3 |
caudate-putamen | 1.67e-09 | 3 |
dorsal striatum | 1.67e-09 | 3 |
reproductive organ | 1.10e-08 | 48 |
duct of male reproductive system | 1.80e-07 | 4 |
corpus striatum | 1.92e-07 | 4 |
striatum | 1.92e-07 | 4 |
ventral part of telencephalon | 1.92e-07 | 4 |
future corpus striatum | 1.92e-07 | 4 |
reproductive structure | 3.93e-07 | 59 |
reproductive system | 3.93e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.66e-34 | 3 |
leiomyoma | 4.66e-34 | 3 |
benign neoplasm | 7.64e-26 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.