FFCP PHASE1:Hg19::chr14:51956090..51956101,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=122786|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19839|TSSclassifier=N|UniProt=Q96NE9|association_with_transcript=235bp_to_ENST00000356218,NM_001042481,uc001wzb.2_5end|coexpression_cluster_id=C268|description=CAGE_peak_32_at_FRMD6_5end|id=chr14:51956090..51956101,+|ontology_enrichment_celltype=CL:0002076!3.97e-25!43;CL:0002159!1.55e-18!13;CL:0000223!4.20e-17!59;CL:0000244!9.01e-17!4;CL:0000731!9.01e-17!4;CL:0002251!9.51e-17!21;CL:0000066!1.68e-15!254;CL:0002166!2.04e-13!3;CL:0002621!3.05e-13!3;CL:0000076!6.51e-12!62;CL:0002368!2.16e-10!13;CL:0002077!5.15e-10!33;CL:0000575!1.99e-08!2;CL:0000220!1.15e-07!246;CL:0002321!1.51e-07!248|ontology_enrichment_celltype_v019=CL:0000244;9.25e-50;4!CL:0000731;9.25e-50;4!CL:0002166;1.84e-30;3!CL:0002621;3.59e-30;3!CL:0002076;3.32e-09;42!CL:0002231;1.17e-08;3!CL:0002159;2.64e-07;14|ontology_enrichment_celltype_v019_2=CL:0000244,1.41e-49,4;CL:0000731,1.41e-49,4;CL:0002166,1.09e-30,3;CL:0002621,3.59e-30,3;CL:0002076,9.04e-09,42;CL:0002231,1.04e-08,3;CL:0002159,2.36e-07,14;CL:0000066,8.89e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!2.74e-16!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000161!5.14e-21!35;UBERON:0000365!5.63e-20!5;UBERON:0003729!4.03e-19!5;UBERON:0000166!1.19e-16!21;UBERON:0005910!1.34e-16!6;UBERON:0003343!9.03e-16!4;UBERON:0004785!9.03e-16!4;UBERON:0000165!1.64e-14!28;UBERON:0000930!1.64e-14!28;UBERON:0000344!1.66e-14!12;UBERON:0003102!4.64e-14!95;UBERON:0001949!3.05e-13!3;UBERON:0004119!3.92e-13!169;UBERON:0000925!3.92e-13!169;UBERON:0006595!3.92e-13!169;UBERON:0001004!4.65e-13!72;UBERON:0001444!1.13e-10!48;UBERON:0001708!3.67e-10!4;UBERON:0001704!3.67e-10!4;UBERON:0001255!4.71e-08!2;UBERON:0001556!4.71e-08!2;UBERON:0002090!6.89e-07!6|ontology_enrichment_uberon_v019=UBERON:0000486;1.13e-45;12!UBERON:0000365;5.31e-40;5!UBERON:0005910;1.73e-33;6!UBERON:0001949;3.59e-30;3!UBERON:0001708;3.88e-23;4!UBERON:0008895;3.88e-23;4!UBERON:0011159;9.89e-19;5!UBERON:0003929;1.49e-13;7!UBERON:0003350;5.51e-12;8!UBERON:0001828;5.51e-12;8!UBERON:0005911;6.10e-12;36!UBERON:0011137;4.70e-09;11!UBERON:0010323;4.70e-09;11!UBERON:0003729;9.84e-08;13!UBERON:0006554;3.00e-07;30!UBERON:0001008;3.00e-07;30|ontology_enrichment_uberon_v019_2=UBERON:0000365,7.43e-40,5;UBERON:0005910,2.29e-33,6;UBERON:0001949,3.59e-30,3;UBERON:0001708,2.63e-23,4;UBERON:0008895,2.63e-23,4;UBERON:0011159,7.24e-19,5;UBERON:0010188,6.71e-16,6;UBERON:0002539,6.71e-16,6;UBERON:0008816,6.71e-16,6;UBERON:0003350,5.52e-12,8;UBERON:0001828,5.52e-12,8;UBERON:0005911,1.18e-09,82;UBERON:0010323,4.08e-09,11;UBERON:0006554,7.14e-08,47;UBERON:0003729,9.84e-08,13;UBERON:0001008,1.03e-07,48;UBERON:0011137,2.36e-07,14;UBERON:0000486,9.07e-07,83|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.603173834469785,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,3.86358894857377,0.992425680696705,0.626909658919938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0.768760269460425,1.27612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0,1.29151611801369,1.68471475667626,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0.383830394638891,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=122786 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |||
|TSSclassifier=N | |||
|UniProt=Q96NE9 | |||
|association_with_transcript=235bp_to_ENST00000356218,NM_001042481,uc001wzb.2_5end | |||
|coexpression_cluster_id=C268 | |||
|description=CAGE_peak_32_at_FRMD6_5end | |||
|id=chr14:51956090..51956101,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.97e-25!43;CL:0002159!1.55e-18!13;CL:0000223!4.20e-17!59;CL:0000244!9.01e-17!4;CL:0000731!9.01e-17!4;CL:0002251!9.51e-17!21;CL:0000066!1.68e-15!254;CL:0002166!2.04e-13!3;CL:0002621!3.05e-13!3;CL:0000076!6.51e-12!62;CL:0002368!2.16e-10!13;CL:0002077!5.15e-10!33;CL:0000575!1.99e-08!2;CL:0000220!1.15e-07!246;CL:0002321!1.51e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000244;9.25e-50;4!CL:0000731;9.25e-50;4!CL:0002166;1.84e-30;3!CL:0002621;3.59e-30;3!CL:0002076;3.32e-09;42!CL:0002231;1.17e-08;3!CL:0002159;2.64e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.41e-49,4;CL:0000731,1.41e-49,4;CL:0002166,1.09e-30,3;CL:0002621,3.59e-30,3;CL:0002076,9.04e-09,42;CL:0002231,1.04e-08,3;CL:0002159,2.36e-07,14;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.74e-16!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!5.14e-21!35;UBERON:0000365!5.63e-20!5;UBERON:0003729!4.03e-19!5;UBERON:0000166!1.19e-16!21;UBERON:0005910!1.34e-16!6;UBERON:0003343!9.03e-16!4;UBERON:0004785!9.03e-16!4;UBERON:0000165!1.64e-14!28;UBERON:0000930!1.64e-14!28;UBERON:0000344!1.66e-14!12;UBERON:0003102!4.64e-14!95;UBERON:0001949!3.05e-13!3;UBERON:0004119!3.92e-13!169;UBERON:0000925!3.92e-13!169;UBERON:0006595!3.92e-13!169;UBERON:0001004!4.65e-13!72;UBERON:0001444!1.13e-10!48;UBERON:0001708!3.67e-10!4;UBERON:0001704!3.67e-10!4;UBERON:0001255!4.71e-08!2;UBERON:0001556!4.71e-08!2;UBERON:0002090!6.89e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.13e-45;12!UBERON:0000365;5.31e-40;5!UBERON:0005910;1.73e-33;6!UBERON:0001949;3.59e-30;3!UBERON:0001708;3.88e-23;4!UBERON:0008895;3.88e-23;4!UBERON:0011159;9.89e-19;5!UBERON:0003929;1.49e-13;7!UBERON:0003350;5.51e-12;8!UBERON:0001828;5.51e-12;8!UBERON:0005911;6.10e-12;36!UBERON:0011137;4.70e-09;11!UBERON:0010323;4.70e-09;11!UBERON:0003729;9.84e-08;13!UBERON:0006554;3.00e-07;30!UBERON:0001008;3.00e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,7.43e-40,5;UBERON:0005910,2.29e-33,6;UBERON:0001949,3.59e-30,3;UBERON:0001708,2.63e-23,4;UBERON:0008895,2.63e-23,4;UBERON:0011159,7.24e-19,5;UBERON:0010188,6.71e-16,6;UBERON:0002539,6.71e-16,6;UBERON:0008816,6.71e-16,6;UBERON:0003350,5.52e-12,8;UBERON:0001828,5.52e-12,8;UBERON:0005911,1.18e-09,82;UBERON:0010323,4.08e-09,11;UBERON:0006554,7.14e-08,47;UBERON:0003729,9.84e-08,13;UBERON:0001008,1.03e-07,48;UBERON:0011137,2.36e-07,14;UBERON:0000486,9.07e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.603173834469785,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,3.86358894857377,0.992425680696705,0.626909658919938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0.768760269460425,1.27612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0,1.29151611801369,1.68471475667626,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0.383830394638891,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.471878893390961,0.550285795565037,0.808679663052368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.202056159043763,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p32@FRMD6 | |||
}} |
Revision as of 04:41, 11 September 2013
Short description: | p32@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_32_at_FRMD6_5end |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | 235bp_to_ENST00000356218, NM_001042481, uc001wzb.2_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | Q96NE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.41e-49 | 4 |
urothelial cell | 1.41e-49 | 4 |
epithelial cell of Malassez | 1.09e-30 | 3 |
gingival epithelial cell | 3.59e-30 | 3 |
endo-epithelial cell | 9.04e-09 | 42 |
epithelial cell of prostate | 1.04e-08 | 3 |
general ecto-epithelial cell | 2.36e-07 | 14 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
urothelium | 7.43e-40 | 5 |
transitional epithelium | 2.29e-33 | 6 |
gingival epithelium | 3.59e-30 | 3 |
jaw skeleton | 2.63e-23 | 4 |
splanchnocranium | 2.63e-23 | 4 |
primary subdivision of cranial skeletal system | 7.24e-19 | 5 |
protuberance | 6.71e-16 | 6 |
pharyngeal arch | 6.71e-16 | 6 |
embryonic head | 6.71e-16 | 6 |
epithelium of mucosa | 5.52e-12 | 8 |
gingiva | 5.52e-12 | 8 |
endo-epithelium | 1.18e-09 | 82 |
cranial skeletal system | 4.08e-09 | 11 |
urinary system structure | 7.14e-08 | 47 |
mouth mucosa | 9.84e-08 | 13 |
renal system | 1.03e-07 | 48 |
axial skeletal system | 2.36e-07 | 14 |
multilaminar epithelium | 9.07e-07 | 83 |
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