FFCP PHASE1:Hg19::chr15:90347000..90347024,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:90347000..90347024,-|id=chr15:90347000..90347024,-|ontology_enrichment_celltype=CL:0000048!4.15e-20!430;CL:0000723!3.36e-19!436;CL:0000034!1.70e-18!444;CL:0002320!1.03e-14!365;CL:0002194!2.35e-14!63;CL:0000576!2.35e-14!63;CL:0000040!2.35e-14!63;CL:0000559!2.35e-14!63;CL:0002057!2.49e-14!42;CL:0000134!7.17e-14!358;CL:0002009!1.55e-13!65;CL:0000860!1.02e-12!45;CL:0000839!2.04e-12!70;CL:0000557!4.52e-12!71;CL:0002371!4.75e-12!591;CL:0000766!4.78e-12!76;CL:0000219!1.38e-10!390;CL:0000055!2.13e-10!180;CL:0000144!1.67e-09!625;CL:0000057!7.20e-09!75;CL:0000763!7.43e-08!112;CL:0000049!7.43e-08!112;CL:0002620!3.16e-07!23|ontology_enrichment_celltype_v019=CL:0000473;2.01e-13;39!CL:0000234;2.01e-13;39!CL:0002600;5.16e-12;2!CL:0000235;5.02e-09;6!CL:0000860;8.27e-09;33!CL:0002057;8.27e-09;33!CL:0000228;2.98e-07;1!CL:0002372;2.98e-07;1|ontology_enrichment_celltype_v019_2=CL:0002600,6.49e-12,2;CL:0000473,7.41e-12,48;CL:0000234,7.41e-12,48;CL:0002194,4.43e-09,59;CL:0000576,4.43e-09,59;CL:0000040,4.43e-09,59;CL:0000559,4.43e-09,59;CL:0000235,7.60e-09,6;CL:0002009,1.01e-08,61;CL:0000839,6.35e-08,66;CL:0000557,8.88e-08,67;CL:0000228,2.50e-07,1;CL:0002372,2.50e-07,1;CL:0000860,2.79e-07,42;CL:0002057,2.79e-07,42;CL:0000766,4.12e-07,72|ontology_enrichment_development_v019=CL:0002057;1.05e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;2.69e-08;3!DOID:127;2.69e-08;3|ontology_enrichment_disease_v019_2=DOID:0060084,2.24e-08,3;DOID:127,2.24e-08,3|ontology_enrichment_uberon=UBERON:0002204!1.30e-16!167;UBERON:0002384!2.73e-14!375;UBERON:0002371!5.92e-12!80;UBERON:0001474!3.07e-10!86;UBERON:0002405!3.93e-10!115;UBERON:0004765!1.47e-09!101;UBERON:0001434!1.47e-09!101;UBERON:0000926!6.73e-09!448;UBERON:0004120!6.73e-09!448;UBERON:0006603!6.73e-09!448;UBERON:0002390!2.00e-07!102;UBERON:0003061!2.00e-07!102;UBERON:0004290!3.79e-07!70;UBERON:0002193!8.30e-07!112|ontology_enrichment_uberon_v019=UBERON:0002108;2.61e-11;4|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.36e-11,4;UBERON:0002204,6.55e-07,167|phase1_expression=0.726713517082227,0,0,0,0,0,0,0.631719873426831,1.04474251279935,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,1.02000345622126,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.581592955118259,0.377875943688809,0.727752183563449,2.09186133215116,1.23350366406548,0.309706370895104,0.863077176966451,1.0246428261164,0,0.344745680736619,0,1.35426486594342,1.12945403725563,0.818718450173537,0,0.918251677112708,0.320929027076094,1.27867425159808,0.989553900560148,0.797854630486527,0.426224750532694,1.7412554317715,0.56738522469114,0.622822248995575,0.502497330513487,1.5644487552606,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0,0,0,0.300353785683013,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0,0,0,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.357198913136319,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.448346041655403,0.469737994575059,0.323745888736263,0.140450806702248,0,0.122834317311768,0.929932030581889,0,0,0.910161361938026,0,0,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0.358779271377724,0,0.211931901159562,0.600182192168805,0.515262646192195,0.257640540045629,0.18611685633159,0.506328996723799,0,0.252433774244115,0.276149695926898,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,3.80265104465493,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,3.57656445851882,1.690605505112,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0,1.2162378064119,1.00451418286425,2.10833939483032,0,0,2.85273810081437,0.434343920002738,1.2328579353023,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.616838775210622,0.887808626565635,0.98552587216571,1.55776328755086,0.697262270759755,0,0.40101294060657,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0.340187410553031,0,0,0.270946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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:90347000..90347024,- | |||
|id=chr15:90347000..90347024,- | |||
|ontology_enrichment_celltype=CL:0000048!4.15e-20!430;CL:0000723!3.36e-19!436;CL:0000034!1.70e-18!444;CL:0002320!1.03e-14!365;CL:0002194!2.35e-14!63;CL:0000576!2.35e-14!63;CL:0000040!2.35e-14!63;CL:0000559!2.35e-14!63;CL:0002057!2.49e-14!42;CL:0000134!7.17e-14!358;CL:0002009!1.55e-13!65;CL:0000860!1.02e-12!45;CL:0000839!2.04e-12!70;CL:0000557!4.52e-12!71;CL:0002371!4.75e-12!591;CL:0000766!4.78e-12!76;CL:0000219!1.38e-10!390;CL:0000055!2.13e-10!180;CL:0000144!1.67e-09!625;CL:0000057!7.20e-09!75;CL:0000763!7.43e-08!112;CL:0000049!7.43e-08!112;CL:0002620!3.16e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.01e-13;39!CL:0000234;2.01e-13;39!CL:0002600;5.16e-12;2!CL:0000235;5.02e-09;6!CL:0000860;8.27e-09;33!CL:0002057;8.27e-09;33!CL:0000228;2.98e-07;1!CL:0002372;2.98e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,6.49e-12,2;CL:0000473,7.41e-12,48;CL:0000234,7.41e-12,48;CL:0002194,4.43e-09,59;CL:0000576,4.43e-09,59;CL:0000040,4.43e-09,59;CL:0000559,4.43e-09,59;CL:0000235,7.60e-09,6;CL:0002009,1.01e-08,61;CL:0000839,6.35e-08,66;CL:0000557,8.88e-08,67;CL:0000228,2.50e-07,1;CL:0002372,2.50e-07,1;CL:0000860,2.79e-07,42;CL:0002057,2.79e-07,42;CL:0000766,4.12e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.69e-08;3!DOID:127;2.69e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.24e-08,3;DOID:127,2.24e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.30e-16!167;UBERON:0002384!2.73e-14!375;UBERON:0002371!5.92e-12!80;UBERON:0001474!3.07e-10!86;UBERON:0002405!3.93e-10!115;UBERON:0004765!1.47e-09!101;UBERON:0001434!1.47e-09!101;UBERON:0000926!6.73e-09!448;UBERON:0004120!6.73e-09!448;UBERON:0006603!6.73e-09!448;UBERON:0002390!2.00e-07!102;UBERON:0003061!2.00e-07!102;UBERON:0004290!3.79e-07!70;UBERON:0002193!8.30e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.61e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.36e-11,4;UBERON:0002204,6.55e-07,167 | |||
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| |||
|short_description=p@chr15:90347000..90347024,- | |||
}} |
Revision as of 08:48, 11 September 2013
Short description: | p@chr15:90347000..90347024, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:90347000..90347024, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 6.49e-12 | 2 |
defensive cell | 7.41e-12 | 48 |
phagocyte | 7.41e-12 | 48 |
monopoietic cell | 4.43e-09 | 59 |
monocyte | 4.43e-09 | 59 |
monoblast | 4.43e-09 | 59 |
promonocyte | 4.43e-09 | 59 |
macrophage | 7.60e-09 | 6 |
macrophage dendritic cell progenitor | 1.01e-08 | 61 |
myeloid lineage restricted progenitor cell | 6.35e-08 | 66 |
granulocyte monocyte progenitor cell | 8.88e-08 | 67 |
multinucleate cell | 2.50e-07 | 1 |
myotube | 2.50e-07 | 1 |
classical monocyte | 2.79e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.79e-07 | 42 |
myeloid leukocyte | 4.12e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.36e-11 | 4 |
musculoskeletal system | 6.55e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.24e-08 | 3 |
leiomyoma | 2.24e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.