FFCP PHASE1:Hg19::chr16:87499053..87499056,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C6|description=CAGE_peak_at_chr16:87499053..87499056,-|id=chr16:87499053..87499056,-|ontology_enrichment_celltype=CL:0002057!2.70e-32!42;CL:0000860!1.33e-29!45;CL:0000766!6.40e-29!76;CL:0000839!5.73e-26!70;CL:0000557!1.79e-25!71;CL:0002194!9.27e-24!63;CL:0000576!9.27e-24!63;CL:0000040!9.27e-24!63;CL:0000559!9.27e-24!63;CL:0002009!8.92e-23!65;CL:0000763!1.30e-17!112;CL:0000049!1.30e-17!112;CL:0000738!5.83e-16!140;CL:0002087!2.26e-12!119;CL:0000037!7.91e-12!172;CL:0000566!7.91e-12!172;CL:0002031!1.02e-11!124;CL:0000988!1.32e-10!182;CL:0002032!1.28e-09!165;CL:0000837!1.28e-09!165;CL:0000134!1.37e-08!358;CL:0000767!2.44e-08!3;CL:0002320!3.75e-08!365;CL:0000219!4.92e-08!390;CL:0000048!4.74e-07!430;CL:0000842!5.64e-07!3;CL:0000723!9.48e-07!436|ontology_enrichment_celltype_v019=CL:0000860;1.30e-26;33!CL:0002057;1.30e-26;33!CL:0000473;4.05e-26;39!CL:0000234;4.05e-26;39!CL:0000576;5.16e-24;48!CL:0002393;6.21e-17;6!CL:0002397;6.21e-17;6!CL:0000766;6.47e-15;69!CL:0002601;8.17e-12;1!CL:0000763;3.45e-07;100|ontology_enrichment_celltype_v019_2=CL:0000473,1.07e-40,48;CL:0000234,1.07e-40,48;CL:0000860,2.71e-40,42;CL:0002057,2.71e-40,42;CL:0000766,1.96e-34,72;CL:0000839,6.27e-33,66;CL:0000557,2.05e-32,67;CL:0002194,3.54e-32,59;CL:0000576,3.54e-32,59;CL:0000040,3.54e-32,59;CL:0000559,3.54e-32,59;CL:0002009,4.46e-31,61;CL:0000763,2.40e-22,108;CL:0000049,2.40e-22,108;CL:0000738,2.55e-17,136;CL:0002031,2.71e-17,120;CL:0002087,1.12e-15,115;CL:0002032,2.72e-14,161;CL:0000837,2.72e-14,161;CL:0000037,1.33e-13,168;CL:0000988,8.49e-13,177;CL:0002601,6.26e-12,1;CL:0002393,1.77e-11,9;CL:0002397,1.77e-11,9|ontology_enrichment_development_v019=CL:0002057;7.45e-30;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.58e-25!80;UBERON:0001474!2.58e-24!86;UBERON:0002390!1.76e-21!102;UBERON:0003061!1.76e-21!102;UBERON:0002193!6.19e-20!112;UBERON:0004765!3.12e-19!101;UBERON:0001434!3.12e-19!101;UBERON:0002405!1.15e-15!115;UBERON:0003081!3.33e-11!216;UBERON:0002204!6.77e-11!167;UBERON:0002384!4.72e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.77e-32,76;UBERON:0001474,5.63e-30,82;UBERON:0004765,3.76e-27,90;UBERON:0002405,3.24e-26,93;UBERON:0002390,8.81e-25,98;UBERON:0003061,8.81e-25,98;UBERON:0001434,3.01e-24,100;UBERON:0002193,2.63e-22,108;UBERON:0002204,1.13e-15,167;UBERON:0003081,7.64e-11,203;UBERON:0000926,3.69e-07,315;UBERON:0004120,3.69e-07,315;UBERON:0006603,3.69e-07,315|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,1.70297735647684,0,0,0,0,0,0,8.30993112797816,3.40925560699241,3.68918480216948,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,1.1507695692886,1.5369642391746,1.41889337933151,0.344745680736619,1.29096936716765,1.35426486594342,0.752969358170419,0,0.449446968890169,0.306083892370903,0,0,1.64925650093358,0.797854630486527,1.27867425159808,0,0,0.622822248995575,1.25624332628372,1.0429658368404,1.95469960234605,0,0,0.949387162322653,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0.720599767084807,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr16:87499053..87499056,- | |||
|id=chr16:87499053..87499056,- | |||
|ontology_enrichment_celltype=CL:0002057!2.70e-32!42;CL:0000860!1.33e-29!45;CL:0000766!6.40e-29!76;CL:0000839!5.73e-26!70;CL:0000557!1.79e-25!71;CL:0002194!9.27e-24!63;CL:0000576!9.27e-24!63;CL:0000040!9.27e-24!63;CL:0000559!9.27e-24!63;CL:0002009!8.92e-23!65;CL:0000763!1.30e-17!112;CL:0000049!1.30e-17!112;CL:0000738!5.83e-16!140;CL:0002087!2.26e-12!119;CL:0000037!7.91e-12!172;CL:0000566!7.91e-12!172;CL:0002031!1.02e-11!124;CL:0000988!1.32e-10!182;CL:0002032!1.28e-09!165;CL:0000837!1.28e-09!165;CL:0000134!1.37e-08!358;CL:0000767!2.44e-08!3;CL:0002320!3.75e-08!365;CL:0000219!4.92e-08!390;CL:0000048!4.74e-07!430;CL:0000842!5.64e-07!3;CL:0000723!9.48e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-26;33!CL:0002057;1.30e-26;33!CL:0000473;4.05e-26;39!CL:0000234;4.05e-26;39!CL:0000576;5.16e-24;48!CL:0002393;6.21e-17;6!CL:0002397;6.21e-17;6!CL:0000766;6.47e-15;69!CL:0002601;8.17e-12;1!CL:0000763;3.45e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.07e-40,48;CL:0000234,1.07e-40,48;CL:0000860,2.71e-40,42;CL:0002057,2.71e-40,42;CL:0000766,1.96e-34,72;CL:0000839,6.27e-33,66;CL:0000557,2.05e-32,67;CL:0002194,3.54e-32,59;CL:0000576,3.54e-32,59;CL:0000040,3.54e-32,59;CL:0000559,3.54e-32,59;CL:0002009,4.46e-31,61;CL:0000763,2.40e-22,108;CL:0000049,2.40e-22,108;CL:0000738,2.55e-17,136;CL:0002031,2.71e-17,120;CL:0002087,1.12e-15,115;CL:0002032,2.72e-14,161;CL:0000837,2.72e-14,161;CL:0000037,1.33e-13,168;CL:0000988,8.49e-13,177;CL:0002601,6.26e-12,1;CL:0002393,1.77e-11,9;CL:0002397,1.77e-11,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.45e-30;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.58e-25!80;UBERON:0001474!2.58e-24!86;UBERON:0002390!1.76e-21!102;UBERON:0003061!1.76e-21!102;UBERON:0002193!6.19e-20!112;UBERON:0004765!3.12e-19!101;UBERON:0001434!3.12e-19!101;UBERON:0002405!1.15e-15!115;UBERON:0003081!3.33e-11!216;UBERON:0002204!6.77e-11!167;UBERON:0002384!4.72e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.77e-32,76;UBERON:0001474,5.63e-30,82;UBERON:0004765,3.76e-27,90;UBERON:0002405,3.24e-26,93;UBERON:0002390,8.81e-25,98;UBERON:0003061,8.81e-25,98;UBERON:0001434,3.01e-24,100;UBERON:0002193,2.63e-22,108;UBERON:0002204,1.13e-15,167;UBERON:0003081,7.64e-11,203;UBERON:0000926,3.69e-07,315;UBERON:0004120,3.69e-07,315;UBERON:0006603,3.69e-07,315 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,1.70297735647684,0,0,0,0,0,0,8.30993112797816,3.40925560699241,3.68918480216948,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,1.1507695692886,1.5369642391746,1.41889337933151,0.344745680736619,1.29096936716765,1.35426486594342,0.752969358170419,0,0.449446968890169,0.306083892370903,0,0,1.64925650093358,0.797854630486527,1.27867425159808,0,0,0.622822248995575,1.25624332628372,1.0429658368404,1.95469960234605,0,0,0.949387162322653,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0.720599767084807,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,1.32582103692562,0.50313580350515,0,0,0,0.777186002913902,0.295710299979268,0,0.449803112163605,0,0,0,0,0,0,0.813741466409323,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:87499053..87499056,- | |||
}} |
Revision as of 11:57, 11 September 2013
Short description: | p@chr16:87499053..87499056, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:87499053..87499056, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.07e-40 | 48 |
phagocyte | 1.07e-40 | 48 |
classical monocyte | 2.71e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-40 | 42 |
myeloid leukocyte | 1.96e-34 | 72 |
myeloid lineage restricted progenitor cell | 6.27e-33 | 66 |
granulocyte monocyte progenitor cell | 2.05e-32 | 67 |
monopoietic cell | 3.54e-32 | 59 |
monocyte | 3.54e-32 | 59 |
monoblast | 3.54e-32 | 59 |
promonocyte | 3.54e-32 | 59 |
macrophage dendritic cell progenitor | 4.46e-31 | 61 |
myeloid cell | 2.40e-22 | 108 |
common myeloid progenitor | 2.40e-22 | 108 |
leukocyte | 2.55e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.71e-17 | 120 |
nongranular leukocyte | 1.12e-15 | 115 |
hematopoietic oligopotent progenitor cell | 2.72e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.72e-14 | 161 |
hematopoietic stem cell | 1.33e-13 | 168 |
hematopoietic cell | 8.49e-13 | 177 |
uterine smooth muscle cell | 6.26e-12 | 1 |
intermediate monocyte | 1.77e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.77e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.77e-32 | 76 |
bone element | 5.63e-30 | 82 |
skeletal element | 3.76e-27 | 90 |
immune system | 3.24e-26 | 93 |
hematopoietic system | 8.81e-25 | 98 |
blood island | 8.81e-25 | 98 |
skeletal system | 3.01e-24 | 100 |
hemolymphoid system | 2.63e-22 | 108 |
musculoskeletal system | 1.13e-15 | 167 |
lateral plate mesoderm | 7.64e-11 | 203 |
mesoderm | 3.69e-07 | 315 |
mesoderm-derived structure | 3.69e-07 | 315 |
presumptive mesoderm | 3.69e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.