FFCP PHASE1:Hg19::chr17:29645385..29645411,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C651|description=CAGE_peak_at_chr17:29645385..29645411,+|id=chr17:29645385..29645411,+|ontology_enrichment_celltype=CL:0000738!2.68e-54!140;CL:0000037!5.97e-48!172;CL:0000566!5.97e-48!172;CL:0002087!1.24e-46!119;CL:0002032!1.25e-44!165;CL:0000837!1.25e-44!165;CL:0000988!1.09e-43!182;CL:0002031!1.63e-42!124;CL:0000945!7.17e-34!24;CL:0000826!7.17e-34!24;CL:0000766!4.61e-29!76;CL:0002009!2.01e-26!65;CL:0002194!4.72e-26!63;CL:0000576!4.72e-26!63;CL:0000040!4.72e-26!63;CL:0000559!4.72e-26!63;CL:0000557!8.64e-26!71;CL:0000763!1.67e-25!112;CL:0000049!1.67e-25!112;CL:0002057!2.81e-25!42;CL:0000839!7.85e-25!70;CL:0000860!7.20e-23!45;CL:0000236!4.05e-21!14;CL:0000542!2.32e-17!53;CL:0000051!2.32e-17!53;CL:0000838!2.67e-16!52;CL:0000134!2.45e-11!358;CL:0002320!1.21e-10!365;CL:0000990!1.06e-09!8;CL:0000451!1.43e-09!10;CL:0000219!1.20e-08!390|ontology_enrichment_celltype_v019=CL:0000945;1.55e-73;24!CL:0000236;7.35e-54;13!CL:0000542;2.72e-22;53!CL:0002087;1.77e-10;104!CL:0000738;7.56e-10;136!CL:0000453;2.78e-08;5!CL:0000860;1.00e-07;33!CL:0002057;1.00e-07;33!CL:0000990;1.26e-07;8|ontology_enrichment_celltype_v019_2=CL:0000945,7.14e-74,24;CL:0000826,7.14e-74,24;CL:0000236,8.27e-50,14;CL:0000738,7.44e-36,136;CL:0000542,6.68e-34,53;CL:0000051,6.68e-34,53;CL:0002087,1.28e-31,115;CL:0000838,3.08e-31,52;CL:0002032,8.68e-31,161;CL:0000837,8.68e-31,161;CL:0000037,3.74e-29,168;CL:0002031,8.35e-28,120;CL:0000988,3.05e-27,177;CL:0000134,2.36e-09,354;CL:0002320,5.23e-09,361;CL:0000453,2.62e-08,5;CL:0000219,8.58e-08,386;CL:0000990,1.19e-07,8;CL:0000860,1.47e-07,42;CL:0002057,1.47e-07,42;CL:0000763,8.53e-07,108;CL:0000049,8.53e-07,108|ontology_enrichment_development_v019=CL:0000051;2.72e-22;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;8.44e-11;10|ontology_enrichment_disease_v019_2=DOID:0060058,7.56e-11,10|ontology_enrichment_uberon=UBERON:0002390!1.43e-32!102;UBERON:0003061!1.43e-32!102;UBERON:0002193!1.05e-30!112;UBERON:0002371!4.38e-24!80;UBERON:0001474!2.22e-21!86;UBERON:0002405!3.84e-20!115;UBERON:0004765!5.85e-17!101;UBERON:0001434!5.85e-17!101;UBERON:0002384!3.66e-10!375;UBERON:0003081!9.01e-08!216;UBERON:0007023!5.96e-07!115|ontology_enrichment_uberon_v019=UBERON:0002106;8.96e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.07e-10,108;UBERON:0002390,5.24e-09,98;UBERON:0003061,5.24e-09,98;UBERON:0002384,1.55e-08,371;UBERON:0002405,2.52e-07,93;UBERON:0002106,8.13e-07,3;UBERON:0004854,8.13e-07,3;UBERON:0009034,8.13e-07,3;UBERON:0002095,8.13e-07,3;UBERON:0004782,8.13e-07,3;UBERON:0003281,8.13e-07,3;UBERON:0009664,8.13e-07,3;UBERON:0002296,8.13e-07,3;UBERON:0005602,8.13e-07,3;UBERON:0001179,8.13e-07,3;UBERON:0006293,8.13e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,1.31360943119913,2.44003422072406,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,1.93668001450754,7.53496932183334,0.587200878669695,1.10799081706375,0.601633342410425,0.434021741431704,0.447830948479849,0.32389366601898,0.257575567634187,2.03557534291391,2.26725566213286,1.94067248950253,0.464858073811369,0.411167888021826,0.929119112685311,0.575384784644301,0.768482119587302,1.41889337933151,1.37898272294647,1.93645405075148,1.35426486594342,0.564727018627814,0.545812300115692,0.224723484445085,0,0.962787081228281,0,1.31940520074686,0.997318288108159,1.70489900213078,0.290209238628584,0,0,0.502497330513487,0,0.65156653411535,0,0.368277635987565,0,0,0.212604299965044,0.419317291016752,0.336985893439485,0.600707571366025,0.16072558669708,0,0.39783335439818,0,3.51992488922645,4.91524750135918,3.55803701545422,5.12076267079809,4.80475184443215,5.74752439954483,5.2883589822789,2.86216126360609,3.41527781465669,1.76171156811282,2.29363936875137,0,0,0,0,0,0,0.167186495390678,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,1.62273696827342,0.522389211897802,0.664789802594326,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C651 | |||
|description=CAGE_peak_at_chr17:29645385..29645411,+ | |||
|id=chr17:29645385..29645411,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.68e-54!140;CL:0000037!5.97e-48!172;CL:0000566!5.97e-48!172;CL:0002087!1.24e-46!119;CL:0002032!1.25e-44!165;CL:0000837!1.25e-44!165;CL:0000988!1.09e-43!182;CL:0002031!1.63e-42!124;CL:0000945!7.17e-34!24;CL:0000826!7.17e-34!24;CL:0000766!4.61e-29!76;CL:0002009!2.01e-26!65;CL:0002194!4.72e-26!63;CL:0000576!4.72e-26!63;CL:0000040!4.72e-26!63;CL:0000559!4.72e-26!63;CL:0000557!8.64e-26!71;CL:0000763!1.67e-25!112;CL:0000049!1.67e-25!112;CL:0002057!2.81e-25!42;CL:0000839!7.85e-25!70;CL:0000860!7.20e-23!45;CL:0000236!4.05e-21!14;CL:0000542!2.32e-17!53;CL:0000051!2.32e-17!53;CL:0000838!2.67e-16!52;CL:0000134!2.45e-11!358;CL:0002320!1.21e-10!365;CL:0000990!1.06e-09!8;CL:0000451!1.43e-09!10;CL:0000219!1.20e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.55e-73;24!CL:0000236;7.35e-54;13!CL:0000542;2.72e-22;53!CL:0002087;1.77e-10;104!CL:0000738;7.56e-10;136!CL:0000453;2.78e-08;5!CL:0000860;1.00e-07;33!CL:0002057;1.00e-07;33!CL:0000990;1.26e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.14e-74,24;CL:0000826,7.14e-74,24;CL:0000236,8.27e-50,14;CL:0000738,7.44e-36,136;CL:0000542,6.68e-34,53;CL:0000051,6.68e-34,53;CL:0002087,1.28e-31,115;CL:0000838,3.08e-31,52;CL:0002032,8.68e-31,161;CL:0000837,8.68e-31,161;CL:0000037,3.74e-29,168;CL:0002031,8.35e-28,120;CL:0000988,3.05e-27,177;CL:0000134,2.36e-09,354;CL:0002320,5.23e-09,361;CL:0000453,2.62e-08,5;CL:0000219,8.58e-08,386;CL:0000990,1.19e-07,8;CL:0000860,1.47e-07,42;CL:0002057,1.47e-07,42;CL:0000763,8.53e-07,108;CL:0000049,8.53e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;2.72e-22;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.44e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.56e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.43e-32!102;UBERON:0003061!1.43e-32!102;UBERON:0002193!1.05e-30!112;UBERON:0002371!4.38e-24!80;UBERON:0001474!2.22e-21!86;UBERON:0002405!3.84e-20!115;UBERON:0004765!5.85e-17!101;UBERON:0001434!5.85e-17!101;UBERON:0002384!3.66e-10!375;UBERON:0003081!9.01e-08!216;UBERON:0007023!5.96e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.96e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.07e-10,108;UBERON:0002390,5.24e-09,98;UBERON:0003061,5.24e-09,98;UBERON:0002384,1.55e-08,371;UBERON:0002405,2.52e-07,93;UBERON:0002106,8.13e-07,3;UBERON:0004854,8.13e-07,3;UBERON:0009034,8.13e-07,3;UBERON:0002095,8.13e-07,3;UBERON:0004782,8.13e-07,3;UBERON:0003281,8.13e-07,3;UBERON:0009664,8.13e-07,3;UBERON:0002296,8.13e-07,3;UBERON:0005602,8.13e-07,3;UBERON:0001179,8.13e-07,3;UBERON:0006293,8.13e-07,3 | |||
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|short_description=p@chr17:29645385..29645411,+ | |||
}} |
Revision as of 12:55, 11 September 2013
Short description: | p@chr17:29645385..29645411, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:29645385..29645411, + |
Coexpression cluster: | C651_splenic_CD19_B_xeroderma_plasma_Burkitt_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.14e-74 | 24 |
pro-B cell | 7.14e-74 | 24 |
B cell | 8.27e-50 | 14 |
leukocyte | 7.44e-36 | 136 |
lymphocyte | 6.68e-34 | 53 |
common lymphoid progenitor | 6.68e-34 | 53 |
nongranular leukocyte | 1.28e-31 | 115 |
lymphoid lineage restricted progenitor cell | 3.08e-31 | 52 |
hematopoietic oligopotent progenitor cell | 8.68e-31 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-31 | 161 |
hematopoietic stem cell | 3.74e-29 | 168 |
hematopoietic lineage restricted progenitor cell | 8.35e-28 | 120 |
hematopoietic cell | 3.05e-27 | 177 |
mesenchymal cell | 2.36e-09 | 354 |
connective tissue cell | 5.23e-09 | 361 |
Langerhans cell | 2.62e-08 | 5 |
motile cell | 8.58e-08 | 386 |
conventional dendritic cell | 1.19e-07 | 8 |
classical monocyte | 1.47e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-07 | 42 |
myeloid cell | 8.53e-07 | 108 |
common myeloid progenitor | 8.53e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.07e-10 | 108 |
hematopoietic system | 5.24e-09 | 98 |
blood island | 5.24e-09 | 98 |
connective tissue | 1.55e-08 | 371 |
immune system | 2.52e-07 | 93 |
spleen | 8.13e-07 | 3 |
gastrointestinal system mesentery | 8.13e-07 | 3 |
stomach region | 8.13e-07 | 3 |
mesentery | 8.13e-07 | 3 |
gastrointestinal system serosa | 8.13e-07 | 3 |
mesentery of stomach | 8.13e-07 | 3 |
gut mesentery | 8.13e-07 | 3 |
dorsal mesentery | 8.13e-07 | 3 |
dorsal mesogastrium | 8.13e-07 | 3 |
peritoneal cavity | 8.13e-07 | 3 |
spleen primordium | 8.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.56e-11 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.