FFCP PHASE1:Hg19::chr17:42402144..42402212,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24279 | |||
|TSSclassifier=S | |||
|UniProt=B4DFG5 | |||
|association_with_transcript=0bp_to_ENST00000537904_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_SLC25A39_5end | |||
|id=chr17:42402144..42402212,- | |||
|ontology_enrichment_celltype=CL:0000066!8.29e-47!254;CL:0002321!6.75e-24!248;CL:0000220!3.37e-23!246;CL:0000548!3.29e-13!679;CL:0000004!3.29e-13!679;CL:0000255!3.29e-13!679;CL:0000012!2.39e-12!682;CL:0000223!6.79e-12!59;CL:0002076!3.51e-10!43;CL:0000003!3.53e-09!722;CL:0002077!4.81e-09!33;CL:0000076!2.60e-08!62;CL:0000221!4.67e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0002077;1.64e-08;34!CL:0002076;4.05e-07;42!CL:1000449;6.64e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.73e-47,253;CL:0002321,1.70e-23,250;CL:0000223,1.31e-11,58;CL:0002076,6.78e-10,42;CL:0002077,2.48e-09,34;CL:0000076,1.44e-08,63;CL:0000221,2.66e-08,72;CL:1000449,6.43e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;8.97e-07;58 | |||
|ontology_enrichment_disease=DOID:162!5.62e-21!235;DOID:14566!8.11e-21!239;DOID:305!1.81e-17!106;DOID:0050687!1.36e-16!143;DOID:0050686!1.44e-08!137;DOID:299!3.47e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;3.41e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.62e-21,235;DOID:14566,8.11e-21,239;DOID:305,1.81e-17,106;DOID:0050687,1.36e-16,143;DOID:0050686,1.44e-08,137;DOID:299,3.47e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.43e-13!238;UBERON:0009142!2.43e-13!238;UBERON:0009569!8.68e-12!113;UBERON:0005177!1.37e-11!107;UBERON:0001041!5.96e-11!98;UBERON:0004119!1.04e-10!169;UBERON:0000925!1.04e-10!169;UBERON:0006595!1.04e-10!169;UBERON:0002100!2.79e-10!216;UBERON:0008947!6.79e-10!38;UBERON:0003258!6.79e-10!38;UBERON:0001048!8.81e-10!168;UBERON:0000077!1.33e-09!130;UBERON:0000466!2.61e-09!126;UBERON:0004921!2.06e-08!129;UBERON:0004185!2.06e-08!129;UBERON:0000072!2.42e-08!46;UBERON:0000065!2.54e-08!53;UBERON:0001007!2.85e-08!155;UBERON:0001555!2.85e-08!155;UBERON:0007026!2.85e-08!155;UBERON:0001004!1.66e-07!72;UBERON:0005172!1.75e-07!55;UBERON:0005173!1.75e-07!55;UBERON:0000464!2.60e-07!104;UBERON:0001737!5.65e-07!9;UBERON:0005178!6.52e-07!34;UBERON:0002224!6.52e-07!34 | |||
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| |||
|short_description=p1@SLC25A39 | |||
}} |
Revision as of 13:53, 11 September 2013
Short description: | p1@SLC25A39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLC25A39_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000537904_5end |
EntrezGene: | SLC25A39 |
HGNC: | 24279 |
UniProt: | B4DFG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.73e-47 | 253 |
embryonic cell | 1.70e-23 | 250 |
endodermal cell | 1.31e-11 | 58 |
endo-epithelial cell | 6.78e-10 | 42 |
ecto-epithelial cell | 2.48e-09 | 34 |
squamous epithelial cell | 1.44e-08 | 63 |
ectodermal cell | 2.66e-08 | 72 |
epithelial cell of nephron | 6.43e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.37e-12 | 101 |
subdivision of trunk | 1.56e-11 | 112 |
trunk | 3.13e-11 | 199 |
foregut | 2.30e-10 | 87 |
respiratory primordium | 6.79e-10 | 38 |
endoderm of foregut | 6.79e-10 | 38 |
endoderm-derived structure | 1.39e-09 | 160 |
endoderm | 1.39e-09 | 160 |
presumptive endoderm | 1.39e-09 | 160 |
primordium | 3.70e-09 | 160 |
abdomen element | 5.45e-08 | 54 |
abdominal segment element | 5.45e-08 | 54 |
respiratory tract | 8.54e-08 | 54 |
segment of respiratory tract | 9.07e-08 | 47 |
subdivision of digestive tract | 9.59e-08 | 118 |
urinary system structure | 1.09e-07 | 47 |
digestive system | 1.55e-07 | 145 |
digestive tract | 1.55e-07 | 145 |
primitive gut | 1.55e-07 | 145 |
renal system | 3.33e-07 | 48 |
abdominal segment of trunk | 3.69e-07 | 60 |
abdomen | 3.69e-07 | 60 |
kidney | 5.14e-07 | 26 |
kidney mesenchyme | 5.14e-07 | 26 |
upper urinary tract | 5.14e-07 | 26 |
kidney rudiment | 5.14e-07 | 26 |
kidney field | 5.14e-07 | 26 |
respiratory system | 5.31e-07 | 74 |
larynx | 5.65e-07 | 9 |
nephron epithelium | 6.43e-07 | 15 |
renal tubule | 6.43e-07 | 15 |
nephron tubule | 6.43e-07 | 15 |
nephron | 6.43e-07 | 15 |
uriniferous tubule | 6.43e-07 | 15 |
nephrogenic mesenchyme | 6.43e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.62e-21 | 235 |
disease of cellular proliferation | 8.11e-21 | 239 |
carcinoma | 1.81e-17 | 106 |
cell type cancer | 1.36e-16 | 143 |
organ system cancer | 1.44e-08 | 137 |
adenocarcinoma | 3.47e-08 | 25 |
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