FFCP PHASE1:Hg19::chr17:65373531..65373577,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26207|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21045|TSSclassifier=S|UniProt=E7EU35,Q9UKF7|association_with_transcript=-346bp_to_ENST00000299954,ENST00000335257,NM_012417,NM_181671,uc002jgb.2,uc002jgc.2_5end|description=CAGE_peak_2_at_PITPNC1_5end|id=chr17:65373531..65373577,+|ontology_enrichment_celltype=CL:0002087!1.90e-18!119;CL:0000738!5.66e-18!140;CL:0002031!5.14e-15!124;CL:0000084!1.34e-12!25;CL:0000827!1.34e-12!25;CL:0000791!1.39e-11!18;CL:0000789!1.39e-11!18;CL:0002420!1.39e-11!18;CL:0002419!1.39e-11!18;CL:0000790!1.39e-11!18;CL:0000037!1.58e-11!172;CL:0000566!1.58e-11!172;CL:0000838!1.91e-11!52;CL:0000542!2.36e-11!53;CL:0000051!2.36e-11!53;CL:0000988!7.08e-11!182;CL:0002032!7.62e-11!165;CL:0000837!7.62e-11!165;CL:0002057!3.61e-10!42;CL:0000860!7.56e-10!45;CL:0000766!1.07e-08!76;CL:0000625!1.29e-07!11;CL:0002194!6.82e-07!63;CL:0000576!6.82e-07!63;CL:0000040!6.82e-07!63;CL:0000559!6.82e-07!63|ontology_enrichment_celltype_v019=CL:0000084;6.88e-13;25!CL:0000791;7.32e-12;18!CL:0000789;7.32e-12;18!CL:0002419;7.32e-12;18!CL:0000625;9.39e-08;11!CL:0000860;1.64e-07;33!CL:0002057;1.64e-07;33!CL:0000473;5.61e-07;39!CL:0000234;5.61e-07;39!CL:0000542;8.12e-07;53|ontology_enrichment_celltype_v019_2=CL:0002087,4.05e-19,115;CL:0000738,6.48e-18,136;CL:0002031,2.22e-15,120;CL:0000084,8.03e-13,25;CL:0000827,8.03e-13,25;CL:0000037,3.58e-12,168;CL:0000791,8.71e-12,18;CL:0000789,8.71e-12,18;CL:0002420,8.71e-12,18;CL:0002419,8.71e-12,18;CL:0000790,8.71e-12,18;CL:0000838,1.07e-11,52;CL:0000542,1.33e-11,53;CL:0000051,1.33e-11,53;CL:0002032,1.61e-11,161;CL:0000837,1.61e-11,161;CL:0000988,3.97e-11,177;CL:0000473,1.45e-10,48;CL:0000234,1.45e-10,48;CL:0000860,2.42e-10,42;CL:0002057,2.42e-10,42;CL:0000766,7.59e-09,72;CL:0000625,9.73e-08,11;CL:0002194,3.61e-07,59;CL:0000576,3.61e-07,59;CL:0000040,3.61e-07,59;CL:0000559,3.61e-07,59|ontology_enrichment_development_v019=CL:0000790;7.32e-12;18!CL:0002057;9.32e-08;42!CL:0000051;8.12e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.46e-09!112;UBERON:0003081!7.47e-09!216;UBERON:0002390!1.32e-08!102;UBERON:0003061!1.32e-08!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.00e-09,108;UBERON:0002390,1.29e-08,98;UBERON:0003061,1.29e-08,98;UBERON:0003081,5.03e-08,203;UBERON:0002405,1.89e-07,93|phase1_expression=0.908391896352783,0.856402095563933,0.845726424575827,0,2.68176656656373,1.74467704820074,0,1.89515962028049,1.56711376919903,2.94880723801811,4.88460817580699,2.18441372130172,2.63766978228454,0.990130823680373,0.662794751455832,0,1.20538905604795,2.19093027116212,0.975865597581014,1.72369481307503,1.22400414746552,2.19418305034661,3.72106783270374,3.14811177667634,1.75759695432724,6.64796630007176,6.97855010324539,6.61170563034906,3.93364276848904,5.37361157336098,6.34746105595912,0.919421224478927,3.614471025339,3.32778609150109,1.23947520928483,4.69158467208491,2.93600439334847,6.09394949385065,8.62341124121609,8.89744569934992,1.56740831967947,1.94336199611388,1.28787783817093,3.78035420826868,4.53451132426571,3.88134497900506,3.48643555358527,4.11167888021826,5.26500830521676,5.17846306179871,4.86705342405291,2.12834006899727,4.13694816883942,5.80936215225443,5.41705946377367,3.9530891303947,4.63940455098338,4.26974620445661,4.28517449319264,4.49300637906531,5.75403413219137,3.62836430205388,5.18605509816243,4.26224750532694,3.77272010217159,4.53908179752912,1.86846674698672,5.52747063564835,7.82224377630302,5.42972111762792,2.42159801053347,2.20966581592539,1.26584954976354,4.85887158517466,5.52771179909113,3.35453832813401,5.39177429503177,4.35512989240368,3.2145117339416,2.56511469367124,1.9891667719909,4.93193215164512,0,1.09227722252426,1.77901850772711,4.26730222566507,2.00197993518006,1.14950487990897,1.32208974556972,2.86216126360609,1.70763890732835,4.69789751496751,0.764546456250458,5.28685314316103,1.12101712596307,1.58030450865046,8.45852011489482,9.03924754323079,9.86887195197644,2.17342444007882,6.51844533267181,3.78758244587787,9.74133642039557,1.78256731016278,5.30290633454707,3.76607620792156,1.62482318259009,4.22701355094728,2.47112760363769,7.72858151637278,8.29050053357545,6.66547097190621,6.67289534229272,10.1665514674091,8.36284190439814,6.11870450566857,9.96373283364995,12.026960591892,7.59059076058509,9.5569624297229,9.76625180784628,4.75226022224187,6.02300476311091,5.88738411310325,8.74515085866421,6.39298580518846,8.21127996921047,9.47551693156242,16.3138519427939,13.9031427727487,4.87613732627923,2.01210257911091,2.04580098949649,1.44575660953827,1.50401373190767,1.73815822752988,2.3858578411533,5.35298357332899,1.03988298880475,0.443458794925128,1.05401742831751,2.35762335895883,5.82872461268068,5.56176664176644,3.24547393654683,1.0447784237956,3.45690697349049,0.953962497221368,0.571994910780128,0.74291500265913,1.78886166630035,1.72046919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.397832444232549,1.5794168953344,1.0085253435176,6.25211208986474,0.785720083444267,1.14640342257068,1.6264169483875,4.52501816943244,1.56215619722769,4.75379631952723,4.18544347279785,4.37579847214576,6.57909320228619,4.46590060550365,4.04503862027127,1.14986184875636,6.96412386641773,2.01770233331294,2.42786241694653,2.50428410486427,1.77404740325278,0,1.71488009437418,1.83518279037446,3.22286590457961,0.945550727071746,5.7840328983876,2.43328587836593,4.08500533781605,0.280272163313789,2.73947616152849,0.431855182437243,0.47775168788705,4.50302228312935,3.00225862292181,0,0,0.801711364730253,4.14432328326074,0.3414369541879,3.45629830907046,6.45341038230416,2.721636016803,3.06768257132968,2.54032230114557,0.9164274741762,0.93061915699296,1.91107787795487,0,0,0.243835849964539,1.29485767437579,0.821302454849976,6.95888658802919,0,0.935757853848423,2.38740930193642,1.66488127088596,0.67767649223376,1.64910775118144,6.49140227336696,0.926089897295336,0.655678681511872,5.64380755633827,1.47088993052343,4.00650130072764,1.96308467114945,3.86160320425212,4.6492130034174,2.20905249094162,2.6315497034359,3.22289439867886,7.89535131806939,0.71421575442263,0.705789743431384,0.401206833445841,0.730336388246517,4.58729283404541,1.00337708206016,5.83754780114783,3.73953196050031,3.49080552272302,3.1741610430924,0.743990036333503,2.77305377178851,2.16313281061895,1.64016352285603,0.98339014767326,3.4208595273088,2.03977659483963,2.40495664739004,2.48116228744081,4.26202816797038,0.909344378618873,0.267964130156178,4.1458471972939,3.41328886344254,2.98527574661373,1.90451545170992,4.77957932786445,4.22108057211834,1.12131862580613,1.40023748211963,4.04234377916439,2.17716747896961,1.02669990325584,4.44523549896278,4.51849893973861,3.99192427855216,3.90735689332678,0,1.9307228228694,3.4133576800503,2.34640942403454,1.833621662743,3.25516942652591,1.33151354837103,3.22038069745642,0.961705476909699|short_description=p2@PITPNC1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=26207 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21045 | |||
|TSSclassifier=S | |||
|UniProt=E7EU35,Q9UKF7 | |||
|association_with_transcript=-346bp_to_ENST00000299954,ENST00000335257,NM_012417,NM_181671,uc002jgb.2,uc002jgc.2_5end | |||
|description=CAGE_peak_2_at_PITPNC1_5end | |||
|id=chr17:65373531..65373577,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.90e-18!119;CL:0000738!5.66e-18!140;CL:0002031!5.14e-15!124;CL:0000084!1.34e-12!25;CL:0000827!1.34e-12!25;CL:0000791!1.39e-11!18;CL:0000789!1.39e-11!18;CL:0002420!1.39e-11!18;CL:0002419!1.39e-11!18;CL:0000790!1.39e-11!18;CL:0000037!1.58e-11!172;CL:0000566!1.58e-11!172;CL:0000838!1.91e-11!52;CL:0000542!2.36e-11!53;CL:0000051!2.36e-11!53;CL:0000988!7.08e-11!182;CL:0002032!7.62e-11!165;CL:0000837!7.62e-11!165;CL:0002057!3.61e-10!42;CL:0000860!7.56e-10!45;CL:0000766!1.07e-08!76;CL:0000625!1.29e-07!11;CL:0002194!6.82e-07!63;CL:0000576!6.82e-07!63;CL:0000040!6.82e-07!63;CL:0000559!6.82e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000084;6.88e-13;25!CL:0000791;7.32e-12;18!CL:0000789;7.32e-12;18!CL:0002419;7.32e-12;18!CL:0000625;9.39e-08;11!CL:0000860;1.64e-07;33!CL:0002057;1.64e-07;33!CL:0000473;5.61e-07;39!CL:0000234;5.61e-07;39!CL:0000542;8.12e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.05e-19,115;CL:0000738,6.48e-18,136;CL:0002031,2.22e-15,120;CL:0000084,8.03e-13,25;CL:0000827,8.03e-13,25;CL:0000037,3.58e-12,168;CL:0000791,8.71e-12,18;CL:0000789,8.71e-12,18;CL:0002420,8.71e-12,18;CL:0002419,8.71e-12,18;CL:0000790,8.71e-12,18;CL:0000838,1.07e-11,52;CL:0000542,1.33e-11,53;CL:0000051,1.33e-11,53;CL:0002032,1.61e-11,161;CL:0000837,1.61e-11,161;CL:0000988,3.97e-11,177;CL:0000473,1.45e-10,48;CL:0000234,1.45e-10,48;CL:0000860,2.42e-10,42;CL:0002057,2.42e-10,42;CL:0000766,7.59e-09,72;CL:0000625,9.73e-08,11;CL:0002194,3.61e-07,59;CL:0000576,3.61e-07,59;CL:0000040,3.61e-07,59;CL:0000559,3.61e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;7.32e-12;18!CL:0002057;9.32e-08;42!CL:0000051;8.12e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.46e-09!112;UBERON:0003081!7.47e-09!216;UBERON:0002390!1.32e-08!102;UBERON:0003061!1.32e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.00e-09,108;UBERON:0002390,1.29e-08,98;UBERON:0003061,1.29e-08,98;UBERON:0003081,5.03e-08,203;UBERON:0002405,1.89e-07,93 | |||
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| |||
|short_description=p2@PITPNC1 | |||
}} |
Revision as of 15:09, 11 September 2013
Short description: | p2@PITPNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PITPNC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -346bp_to_ENST00000299954, ENST00000335257, NM_012417, NM_181671, uc002jgb.2, uc002jgc.2_5end |
EntrezGene: | PITPNC1 |
HGNC: | 21045 |
UniProt: | E7EU35Q9UKF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 4.05e-19 | 115 |
leukocyte | 6.48e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 2.22e-15 | 120 |
T cell | 8.03e-13 | 25 |
pro-T cell | 8.03e-13 | 25 |
hematopoietic stem cell | 3.58e-12 | 168 |
mature alpha-beta T cell | 8.71e-12 | 18 |
alpha-beta T cell | 8.71e-12 | 18 |
immature T cell | 8.71e-12 | 18 |
mature T cell | 8.71e-12 | 18 |
immature alpha-beta T cell | 8.71e-12 | 18 |
lymphoid lineage restricted progenitor cell | 1.07e-11 | 52 |
lymphocyte | 1.33e-11 | 53 |
common lymphoid progenitor | 1.33e-11 | 53 |
hematopoietic oligopotent progenitor cell | 1.61e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-11 | 161 |
hematopoietic cell | 3.97e-11 | 177 |
defensive cell | 1.45e-10 | 48 |
phagocyte | 1.45e-10 | 48 |
classical monocyte | 2.42e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-10 | 42 |
myeloid leukocyte | 7.59e-09 | 72 |
CD8-positive, alpha-beta T cell | 9.73e-08 | 11 |
monopoietic cell | 3.61e-07 | 59 |
monocyte | 3.61e-07 | 59 |
monoblast | 3.61e-07 | 59 |
promonocyte | 3.61e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.00e-09 | 108 |
hematopoietic system | 1.29e-08 | 98 |
blood island | 1.29e-08 | 98 |
lateral plate mesoderm | 5.03e-08 | 203 |
immune system | 1.89e-07 | 93 |
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