FFCP PHASE1:Hg19::chr17:7210294..7210330,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1984|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3300|TSSclassifier=S|UniProt=P63241,Q6IS14|association_with_transcript=0bp_to_ENST00000336452,NM_001143760,uc002gfr.2_5end|description=CAGE_peak_6_at_EIF5A_5end|id=chr17:7210294..7210330,+|ontology_enrichment_celltype=CL:0000037!8.42e-36!172;CL:0000566!8.42e-36!172;CL:0000988!3.97e-33!182;CL:0002032!5.90e-33!165;CL:0000837!5.90e-33!165;CL:0000738!1.63e-32!140;CL:0002087!1.25e-30!119;CL:0002031!2.26e-29!124;CL:0000763!5.39e-19!112;CL:0000049!5.39e-19!112;CL:0002009!2.29e-17!65;CL:0002194!1.36e-16!63;CL:0000576!1.36e-16!63;CL:0000040!1.36e-16!63;CL:0000559!1.36e-16!63;CL:0000839!7.98e-16!70;CL:0000557!1.22e-15!71;CL:0002057!1.43e-14!42;CL:0000766!1.53e-14!76;CL:0000860!7.44e-14!45;CL:0000945!3.51e-13!24;CL:0000826!3.51e-13!24;CL:0000542!3.80e-13!53;CL:0000051!3.80e-13!53;CL:0000838!1.23e-12!52;CL:0000236!1.88e-09!14;CL:0000451!3.15e-07!10|ontology_enrichment_celltype_v019=CL:0000945;1.10e-13;24!CL:0000236;2.85e-10;13!CL:0000576;3.55e-10;48!CL:0000860;1.38e-09;33!CL:0002057;1.38e-09;33!CL:0002087;2.02e-09;104!CL:0000542;6.02e-09;53!CL:0000473;1.25e-08;39!CL:0000234;1.25e-08;39!CL:0000738;5.32e-08;136!CL:0000451;1.44e-07;10!CL:0000766;2.02e-07;69|ontology_enrichment_celltype_v019_2=CL:0000037,8.20e-38,168;CL:0000988,2.83e-35,177;CL:0002032,7.72e-35,161;CL:0000837,7.72e-35,161;CL:0000738,2.05e-34,136;CL:0002087,1.97e-32,115;CL:0002031,1.63e-30,120;CL:0000763,1.03e-20,108;CL:0000049,1.03e-20,108;CL:0002009,2.74e-19,61;CL:0002194,1.81e-18,59;CL:0000576,1.81e-18,59;CL:0000040,1.81e-18,59;CL:0000559,1.81e-18,59;CL:0000839,5.59e-17,66;CL:0000557,5.60e-17,67;CL:0000766,4.06e-16,72;CL:0000473,7.27e-16,48;CL:0000234,7.27e-16,48;CL:0000860,5.51e-15,42;CL:0002057,5.51e-15,42;CL:0000945,1.30e-13,24;CL:0000826,1.30e-13,24;CL:0000542,4.14e-13,53;CL:0000051,4.14e-13,53;CL:0000838,1.38e-12,52;CL:0000236,9.55e-10,14;CL:0000451,1.93e-07,10|ontology_enrichment_development_v019=CL:0002057;2.02e-10;42!CL:0000051;6.02e-09;53|ontology_enrichment_disease=DOID:2531!2.13e-08!51;DOID:0060083!2.13e-08!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2531,3.46e-08,51;DOID:0060083,3.46e-08,51|ontology_enrichment_uberon=UBERON:0002390!3.58e-17!102;UBERON:0003061!3.58e-17!102;UBERON:0002193!3.82e-15!112;UBERON:0002371!5.27e-14!80;UBERON:0002405!1.47e-12!115;UBERON:0001474!2.23e-12!86;UBERON:0004765!9.45e-09!101;UBERON:0001434!9.45e-09!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.15e-18,98;UBERON:0003061,2.15e-18,98;UBERON:0002193,2.32e-16,108;UBERON:0002371,2.74e-15,76;UBERON:0002405,4.31e-15,93;UBERON:0001474,1.95e-13,82;UBERON:0004765,6.94e-12,90;UBERON:0001434,1.97e-08,100|phase1_expression=1.09007027562334,1.07050261945492,1.55049844505568,4.00293193412522,0,0.872338524100369,0,2.52687949370732,3.13422753839806,0.491467873003018,5.58240934377942,1.31064823278103,1.05506791291381,1.73272894144065,0.331397375727916,0,0.602694528023977,1.46062018077475,1.46379839637152,2.09305798730539,2.24400760368678,2.82109249330279,2.0036519099174,3.01123735160345,1.50651167513763,3.2857764471619,4.8439347775468,3.62069594042925,5.90046415273356,4.60595277716655,8.05043841243595,0.919421224478927,0.90361775633475,0.369754010166788,15.7258417178012,4.69158467208491,8.22081230137572,1.66198622559563,2.80762226458198,3.90619567288533,3.35873211359887,3.56283032620878,1.80302897343931,2.90796477559129,4.1566353805769,2.66842467306598,2.09186133215116,2.46700732813095,3.40677007984614,5.17846306179871,3.33008918487831,4.25668013799453,2.75796544589295,0.645484683583826,5.41705946377367,2.82363509313907,3.82068610080984,6.51698104890745,3.06083892370903,2.56743221660875,6.39337125799041,1.64925650093358,2.79249120670285,3.83602275479425,4.35313857942876,3.97169657283798,1.86846674698672,2.26123798731069,4.69334626578181,5.64690996233303,2.42159801053347,2.94622108790052,4.74693581161327,15.8441464733956,11.0554235981823,16.5630329951617,6.29040334420373,7.65902153491682,6.10757229448904,11.4005097496499,10.3436672143527,16.2571096850524,10.5597746676794,13.1073266702912,12.4531295540898,12.3751764544287,16.0158394814405,17.817325638589,18.5092564379761,14.3108063180305,15.3687501659551,11.7447437874188,11.4681968437569,2.64342657158052,3.92355994087075,10.5353633910031,2.55722701147983,1.57204305099666,2.05601498999509,1.33749196312542,6.8443675993054,3.78758244587787,1.94826728407911,1.11410456885174,1.47302953737419,4.65221178625604,3.79125409271022,1.28091319725675,0.650296737799391,0.986627427622057,0,0.869409257205157,2.37258501059297,3.47803076516627,1.04535523804977,0.793165398882963,1.53288197440768,2.06176467289578,4.80737414837055,3.50421955756506,3.25541726928209,0.950452044448374,3.16207750063323,2.04778577847069,1.24930726552346,3.78843603270427,1.64225599384209,1.20964045934839,2.67440195783507,2.31719046212478,0,0,1.79007586580942,0.722878304769133,2.5066895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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1984 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3300 | |||
|TSSclassifier=S | |||
|UniProt=P63241,Q6IS14 | |||
|association_with_transcript=0bp_to_ENST00000336452,NM_001143760,uc002gfr.2_5end | |||
|description=CAGE_peak_6_at_EIF5A_5end | |||
|id=chr17:7210294..7210330,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.42e-36!172;CL:0000566!8.42e-36!172;CL:0000988!3.97e-33!182;CL:0002032!5.90e-33!165;CL:0000837!5.90e-33!165;CL:0000738!1.63e-32!140;CL:0002087!1.25e-30!119;CL:0002031!2.26e-29!124;CL:0000763!5.39e-19!112;CL:0000049!5.39e-19!112;CL:0002009!2.29e-17!65;CL:0002194!1.36e-16!63;CL:0000576!1.36e-16!63;CL:0000040!1.36e-16!63;CL:0000559!1.36e-16!63;CL:0000839!7.98e-16!70;CL:0000557!1.22e-15!71;CL:0002057!1.43e-14!42;CL:0000766!1.53e-14!76;CL:0000860!7.44e-14!45;CL:0000945!3.51e-13!24;CL:0000826!3.51e-13!24;CL:0000542!3.80e-13!53;CL:0000051!3.80e-13!53;CL:0000838!1.23e-12!52;CL:0000236!1.88e-09!14;CL:0000451!3.15e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.10e-13;24!CL:0000236;2.85e-10;13!CL:0000576;3.55e-10;48!CL:0000860;1.38e-09;33!CL:0002057;1.38e-09;33!CL:0002087;2.02e-09;104!CL:0000542;6.02e-09;53!CL:0000473;1.25e-08;39!CL:0000234;1.25e-08;39!CL:0000738;5.32e-08;136!CL:0000451;1.44e-07;10!CL:0000766;2.02e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.20e-38,168;CL:0000988,2.83e-35,177;CL:0002032,7.72e-35,161;CL:0000837,7.72e-35,161;CL:0000738,2.05e-34,136;CL:0002087,1.97e-32,115;CL:0002031,1.63e-30,120;CL:0000763,1.03e-20,108;CL:0000049,1.03e-20,108;CL:0002009,2.74e-19,61;CL:0002194,1.81e-18,59;CL:0000576,1.81e-18,59;CL:0000040,1.81e-18,59;CL:0000559,1.81e-18,59;CL:0000839,5.59e-17,66;CL:0000557,5.60e-17,67;CL:0000766,4.06e-16,72;CL:0000473,7.27e-16,48;CL:0000234,7.27e-16,48;CL:0000860,5.51e-15,42;CL:0002057,5.51e-15,42;CL:0000945,1.30e-13,24;CL:0000826,1.30e-13,24;CL:0000542,4.14e-13,53;CL:0000051,4.14e-13,53;CL:0000838,1.38e-12,52;CL:0000236,9.55e-10,14;CL:0000451,1.93e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.02e-10;42!CL:0000051;6.02e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!2.13e-08!51;DOID:0060083!2.13e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.46e-08,51;DOID:0060083,3.46e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.58e-17!102;UBERON:0003061!3.58e-17!102;UBERON:0002193!3.82e-15!112;UBERON:0002371!5.27e-14!80;UBERON:0002405!1.47e-12!115;UBERON:0001474!2.23e-12!86;UBERON:0004765!9.45e-09!101;UBERON:0001434!9.45e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.15e-18,98;UBERON:0003061,2.15e-18,98;UBERON:0002193,2.32e-16,108;UBERON:0002371,2.74e-15,76;UBERON:0002405,4.31e-15,93;UBERON:0001474,1.95e-13,82;UBERON:0004765,6.94e-12,90;UBERON:0001434,1.97e-08,100 | |||
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| |||
|short_description=p6@EIF5A | |||
}} |
Revision as of 15:28, 11 September 2013
Short description: | p6@EIF5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_EIF5A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000336452, NM_001143760, uc002gfr.2_5end |
EntrezGene: | EIF5A |
HGNC: | 3300 |
UniProt: | P63241Q6IS14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.20e-38 | 168 |
hematopoietic cell | 2.83e-35 | 177 |
hematopoietic oligopotent progenitor cell | 7.72e-35 | 161 |
hematopoietic multipotent progenitor cell | 7.72e-35 | 161 |
leukocyte | 2.05e-34 | 136 |
nongranular leukocyte | 1.97e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 1.63e-30 | 120 |
myeloid cell | 1.03e-20 | 108 |
common myeloid progenitor | 1.03e-20 | 108 |
macrophage dendritic cell progenitor | 2.74e-19 | 61 |
monopoietic cell | 1.81e-18 | 59 |
monocyte | 1.81e-18 | 59 |
monoblast | 1.81e-18 | 59 |
promonocyte | 1.81e-18 | 59 |
myeloid lineage restricted progenitor cell | 5.59e-17 | 66 |
granulocyte monocyte progenitor cell | 5.60e-17 | 67 |
myeloid leukocyte | 4.06e-16 | 72 |
defensive cell | 7.27e-16 | 48 |
phagocyte | 7.27e-16 | 48 |
classical monocyte | 5.51e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.51e-15 | 42 |
lymphocyte of B lineage | 1.30e-13 | 24 |
pro-B cell | 1.30e-13 | 24 |
lymphocyte | 4.14e-13 | 53 |
common lymphoid progenitor | 4.14e-13 | 53 |
lymphoid lineage restricted progenitor cell | 1.38e-12 | 52 |
B cell | 9.55e-10 | 14 |
dendritic cell | 1.93e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.15e-18 | 98 |
blood island | 2.15e-18 | 98 |
hemolymphoid system | 2.32e-16 | 108 |
bone marrow | 2.74e-15 | 76 |
immune system | 4.31e-15 | 93 |
bone element | 1.95e-13 | 82 |
skeletal element | 6.94e-12 | 90 |
skeletal system | 1.97e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.46e-08 | 51 |
immune system cancer | 3.46e-08 | 51 |
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