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FFCP PHASE1:Hg19::chr17:7531121..7531198,-: Difference between revisions

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{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=112483|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23160|TSSclassifier=W|UniProt=Q96F10|association_with_transcript=0bp_to_ENST00000269298,ENST00000380466,NM_133491,uc002gib.1,uc002gic.2_5end|description=CAGE_peak_1_at_SAT2_5end|id=chr17:7531121..7531198,-|ontology_enrichment_celltype=CL:0002057!2.43e-20!42;CL:0000860!5.12e-17!45;CL:0002009!9.51e-14!65;CL:0002194!1.04e-13!63;CL:0000576!1.04e-13!63;CL:0000040!1.04e-13!63;CL:0000559!1.04e-13!63;CL:0000557!3.20e-11!71;CL:0000839!2.50e-10!70;CL:0000766!3.20e-09!76|ontology_enrichment_celltype_v019=CL:0000860;7.35e-16;33!CL:0002057;7.35e-16;33!CL:0000473;3.89e-14;39!CL:0000234;3.89e-14;39!CL:0000576;7.13e-12;48!CL:0000766;9.56e-07;69|ontology_enrichment_celltype_v019_2=CL:0000473,5.57e-21,48;CL:0000234,5.57e-21,48;CL:0000860,2.43e-20,42;CL:0002057,2.43e-20,42;CL:0002194,1.22e-16,59;CL:0000576,1.22e-16,59;CL:0000040,1.22e-16,59;CL:0000559,1.22e-16,59;CL:0002009,1.27e-16,61;CL:0000557,1.40e-13,67;CL:0000839,1.40e-12,66;CL:0000766,3.36e-11,72|ontology_enrichment_development_v019=CL:0002057;3.37e-15;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000922!3.12e-20!612;UBERON:0000923!5.37e-19!604;UBERON:0005291!5.37e-19!604;UBERON:0006598!5.37e-19!604;UBERON:0002532!5.37e-19!604;UBERON:0002050!8.45e-19!605;UBERON:0005423!8.45e-19!605;UBERON:0000468!1.82e-18!659;UBERON:0000467!2.64e-14!625;UBERON:0000480!5.10e-14!626;UBERON:0002204!6.23e-14!167;UBERON:0002405!9.74e-12!115;UBERON:0002371!1.94e-11!80;UBERON:0000062!3.31e-11!511;UBERON:0000926!6.35e-11!448;UBERON:0004120!6.35e-11!448;UBERON:0006603!6.35e-11!448;UBERON:0003081!1.31e-09!216;UBERON:0004765!1.46e-09!101;UBERON:0001434!1.46e-09!101;UBERON:0001474!1.75e-09!86;UBERON:0000481!6.78e-07!347|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0000922,4.96e-21,592;UBERON:0005423,1.97e-20,581;UBERON:0000923,1.29e-17,560;UBERON:0010316,1.29e-17,560;UBERON:0005291,1.29e-17,560;UBERON:0006598,1.29e-17,560;UBERON:0010317,1.29e-17,560;UBERON:0002532,1.29e-17,560;UBERON:0002204,5.00e-17,167;UBERON:0002050,5.19e-17,564;UBERON:0002371,1.19e-13,76;UBERON:0000926,2.25e-12,315;UBERON:0004120,2.25e-12,315;UBERON:0006603,2.25e-12,315;UBERON:0001434,2.27e-12,100;UBERON:0004765,2.44e-12,90;UBERON:0001474,2.41e-11,82;UBERON:0002405,5.48e-10,93;UBERON:0003081,1.33e-09,203;UBERON:0003104,8.17e-08,160;UBERON:0009142,8.17e-08,160;UBERON:0000479,1.76e-07,773|phase1_expression=46.5096650932625,77.0761886007539,37.7757802977203,57.0417800612843,77.3242693359208,74.1487745485313,73.4569646688101,39.7983520258904,109.175592587533,25.5563293961569,69.7801167972428,32.5477644473957,42.466483494781,71.660718363867,85.8319203135302,46.3904351051725,60.2694528023977,56.9641870502151,62.9433310439754,40.62994916534,40.8001382488506,63.6313084600518,47.2289378766244,30.9336200664718,33.2687994926227,13.7544130346312,8.70266248169425,10.311112352092,70.4122055559538,46.4433571697627,64.5583234228037,34.0185853057203,30.4217977966033,40.3031871081799,3.56349122669387,8.81449241422014,27.5984412974756,44.8736280910821,68.5862010347885,61.6310872833019,69.8616279628564,53.4424548931316,54.8635959060817,87.6751379840775,79.7318241183388,64.0421921535835,101.571489127784,71.9543804038195,73.7101162730347,145.284658122686,111.942228753217,127.936886369725,104.113195582459,78.7491313972268,108.341189275473,109.745283953339,78.3240650666017,76.8554316802189,89.9886643570454,55.8416507112403,73.5237694668897,135.898735676927,118.481412627249,108.261086635304,85.6117253954323,49.3625145481292,39.2378016867212,157.532913115978,123.069968747168,119.019486898404,85.361329871305,45.2981492264705,55.3809178021548,84.0796039521528,93.7584962845842,100.63614984402,126.145052777514,130.353542986427,58.182662384343,62.7028036230747,57.288003033338,47.3100158250402,22.879511779972,26.7607919518444,37.3593886622693,43.5264827017837,35.2348468591691,27.5881171178152,29.0859744025339,27.6675588815256,20.4916668879401,18.2043528704991,30.5818582500183,37.0079720021272,30.8279709639845,16.5931973408299,14.3598132183098,22.7946242394516,17.2705259159588,17.5545820160212,39.4365942626644,36.4554810415745,25.3274746930285,19.4968299549054,22.9792607830373,23.4825928258638,17.060643417196,18.7013326799486,16.9077151827842,19.0747969340264,25.4242016362981,22.314837601599,26.5432948060088,25.4163786685227,33.4513676175926,16.4298546911471,28.7415370201441,30.9264700934367,15.1811815211702,22.936709831335,32.5541726928209,38.9685338223833,31.7713501254101,26.1092686755014,19.9889162483753,32.2017062779863,30.3817358860787,23.9912024437432,31.0230627108869,24.0408510445446,75.5801285573281,76.4598980062145,34.1393040122226,23.8549840573814,80.2140657017423,84.3006740351994,38.1737254584528,48.6634870302636,41.784389186518,33.9245978117723,34.2555664203192,54.683764020295,52.4585215141261,43.0109953629938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|DPIdataset=robustDPI
|EntrezGene=112483
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=23160
|TSSclassifier=W
|UniProt=Q96F10
|association_with_transcript=0bp_to_ENST00000269298,ENST00000380466,NM_133491,uc002gib.1,uc002gic.2_5end
|description=CAGE_peak_1_at_SAT2_5end
|id=chr17:7531121..7531198,-
|ontology_enrichment_celltype=CL:0002057!2.43e-20!42;CL:0000860!5.12e-17!45;CL:0002009!9.51e-14!65;CL:0002194!1.04e-13!63;CL:0000576!1.04e-13!63;CL:0000040!1.04e-13!63;CL:0000559!1.04e-13!63;CL:0000557!3.20e-11!71;CL:0000839!2.50e-10!70;CL:0000766!3.20e-09!76
|ontology_enrichment_celltype_v019=CL:0000860;7.35e-16;33!CL:0002057;7.35e-16;33!CL:0000473;3.89e-14;39!CL:0000234;3.89e-14;39!CL:0000576;7.13e-12;48!CL:0000766;9.56e-07;69
|ontology_enrichment_celltype_v019_2=CL:0000473,5.57e-21,48;CL:0000234,5.57e-21,48;CL:0000860,2.43e-20,42;CL:0002057,2.43e-20,42;CL:0002194,1.22e-16,59;CL:0000576,1.22e-16,59;CL:0000040,1.22e-16,59;CL:0000559,1.22e-16,59;CL:0002009,1.27e-16,61;CL:0000557,1.40e-13,67;CL:0000839,1.40e-12,66;CL:0000766,3.36e-11,72
|ontology_enrichment_development_v019=CL:0002057;3.37e-15;42
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000922!3.12e-20!612;UBERON:0000923!5.37e-19!604;UBERON:0005291!5.37e-19!604;UBERON:0006598!5.37e-19!604;UBERON:0002532!5.37e-19!604;UBERON:0002050!8.45e-19!605;UBERON:0005423!8.45e-19!605;UBERON:0000468!1.82e-18!659;UBERON:0000467!2.64e-14!625;UBERON:0000480!5.10e-14!626;UBERON:0002204!6.23e-14!167;UBERON:0002405!9.74e-12!115;UBERON:0002371!1.94e-11!80;UBERON:0000062!3.31e-11!511;UBERON:0000926!6.35e-11!448;UBERON:0004120!6.35e-11!448;UBERON:0006603!6.35e-11!448;UBERON:0003081!1.31e-09!216;UBERON:0004765!1.46e-09!101;UBERON:0001434!1.46e-09!101;UBERON:0001474!1.75e-09!86;UBERON:0000481!6.78e-07!347
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|short_description=p1@SAT2
}}

Revision as of 15:55, 11 September 2013

Short description:p1@SAT2
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_SAT2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000269298, ENST00000380466, NM_133491, uc002gib.1, uc002gic.2_5end
EntrezGene:SAT2
HGNC: 23160
UniProt: Q96F10
Genome view:ZENBU


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CAGE Expression



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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








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