FFCP PHASE1:Hg19::chr17:76553904..76553912,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3057|description=CAGE_peak_at_chr17:76553904..76553912,+|id=chr17:76553904..76553912,+|ontology_enrichment_celltype=CL:0002057!2.54e-54!42;CL:0000860!1.87e-50!45;CL:0000766!5.93e-46!76;CL:0002194!3.09e-38!63;CL:0000576!3.09e-38!63;CL:0000040!3.09e-38!63;CL:0000559!3.09e-38!63;CL:0002009!5.85e-37!65;CL:0000839!4.41e-34!70;CL:0000557!1.49e-33!71;CL:0000763!6.68e-30!112;CL:0000049!6.68e-30!112;CL:0000738!4.52e-23!140;CL:0000767!2.39e-20!3;CL:0002032!6.50e-19!165;CL:0000837!6.50e-19!165;CL:0002087!1.48e-18!119;CL:0000037!5.79e-18!172;CL:0000566!5.79e-18!172;CL:0002031!1.18e-17!124;CL:0000988!9.86e-17!182;CL:0000094!1.16e-13!8;CL:0000081!5.63e-10!11;CL:0000134!6.74e-08!358;CL:0002320!1.19e-07!365;CL:0002393!3.81e-07!9;CL:0002397!3.81e-07!9;CL:0000219!8.77e-07!390|ontology_enrichment_celltype_v019=CL:0000860;2.60e-30;33!CL:0002057;2.60e-30;33!CL:0000473;7.41e-18;39!CL:0000234;7.41e-18;39!CL:0000576;1.17e-16;48!CL:0000771;1.43e-10;2!CL:0000766;1.47e-10;69!CL:0002087;2.40e-08;104!CL:0000763;1.55e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,6.01e-34,42;CL:0002057,6.01e-34,42;CL:0000473,1.17e-29,48;CL:0000234,1.17e-29,48;CL:0000766,5.31e-24,72;CL:0002194,1.20e-23,59;CL:0000576,1.20e-23,59;CL:0000040,1.20e-23,59;CL:0000559,1.20e-23,59;CL:0002009,7.19e-23,61;CL:0000839,3.95e-21,66;CL:0000557,8.21e-21,67;CL:0000763,6.83e-16,108;CL:0000049,6.83e-16,108;CL:0000738,1.63e-12,136;CL:0002087,5.59e-12,115;CL:0002031,1.85e-11,120;CL:0000771,1.43e-10,2;CL:0002032,1.78e-10,161;CL:0000837,1.78e-10,161;CL:0000037,5.18e-10,168;CL:0000988,1.81e-09,177|ontology_enrichment_development_v019=CL:0002057;5.84e-19;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.17e-29!80;UBERON:0001474!4.30e-27!86;UBERON:0004765!1.58e-22!101;UBERON:0001434!1.58e-22!101;UBERON:0002390!2.85e-22!102;UBERON:0003061!2.85e-22!102;UBERON:0002193!5.97e-20!112;UBERON:0002405!2.48e-19!115;UBERON:0002204!4.04e-12!167;UBERON:0003081!1.73e-08!216;UBERON:0002384!2.57e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.53e-18,76;UBERON:0001474,5.80e-17,82;UBERON:0004765,2.00e-15,90;UBERON:0002405,6.46e-15,93;UBERON:0002390,3.90e-14,98;UBERON:0003061,3.90e-14,98;UBERON:0001434,7.63e-14,100;UBERON:0002193,8.72e-13,108;UBERON:0002204,4.54e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.822335776043652,0,0,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0,0.545812300115692,2.24723484445085,1.83650335422542,1.28371610830437,1.91801137739712,0,0,0,0.580418477257168,0.56738522469114,2.4912889959823,0,0,1.08594422352558,0.605399502633369,1.10483290796269,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0587323241913,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:76553904..76553912,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3057 | |||
|description=CAGE_peak_at_chr17:76553904..76553912,+ | |||
|id=chr17:76553904..76553912,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.54e-54!42;CL:0000860!1.87e-50!45;CL:0000766!5.93e-46!76;CL:0002194!3.09e-38!63;CL:0000576!3.09e-38!63;CL:0000040!3.09e-38!63;CL:0000559!3.09e-38!63;CL:0002009!5.85e-37!65;CL:0000839!4.41e-34!70;CL:0000557!1.49e-33!71;CL:0000763!6.68e-30!112;CL:0000049!6.68e-30!112;CL:0000738!4.52e-23!140;CL:0000767!2.39e-20!3;CL:0002032!6.50e-19!165;CL:0000837!6.50e-19!165;CL:0002087!1.48e-18!119;CL:0000037!5.79e-18!172;CL:0000566!5.79e-18!172;CL:0002031!1.18e-17!124;CL:0000988!9.86e-17!182;CL:0000094!1.16e-13!8;CL:0000081!5.63e-10!11;CL:0000134!6.74e-08!358;CL:0002320!1.19e-07!365;CL:0002393!3.81e-07!9;CL:0002397!3.81e-07!9;CL:0000219!8.77e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.60e-30;33!CL:0002057;2.60e-30;33!CL:0000473;7.41e-18;39!CL:0000234;7.41e-18;39!CL:0000576;1.17e-16;48!CL:0000771;1.43e-10;2!CL:0000766;1.47e-10;69!CL:0002087;2.40e-08;104!CL:0000763;1.55e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.01e-34,42;CL:0002057,6.01e-34,42;CL:0000473,1.17e-29,48;CL:0000234,1.17e-29,48;CL:0000766,5.31e-24,72;CL:0002194,1.20e-23,59;CL:0000576,1.20e-23,59;CL:0000040,1.20e-23,59;CL:0000559,1.20e-23,59;CL:0002009,7.19e-23,61;CL:0000839,3.95e-21,66;CL:0000557,8.21e-21,67;CL:0000763,6.83e-16,108;CL:0000049,6.83e-16,108;CL:0000738,1.63e-12,136;CL:0002087,5.59e-12,115;CL:0002031,1.85e-11,120;CL:0000771,1.43e-10,2;CL:0002032,1.78e-10,161;CL:0000837,1.78e-10,161;CL:0000037,5.18e-10,168;CL:0000988,1.81e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.84e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.17e-29!80;UBERON:0001474!4.30e-27!86;UBERON:0004765!1.58e-22!101;UBERON:0001434!1.58e-22!101;UBERON:0002390!2.85e-22!102;UBERON:0003061!2.85e-22!102;UBERON:0002193!5.97e-20!112;UBERON:0002405!2.48e-19!115;UBERON:0002204!4.04e-12!167;UBERON:0003081!1.73e-08!216;UBERON:0002384!2.57e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.53e-18,76;UBERON:0001474,5.80e-17,82;UBERON:0004765,2.00e-15,90;UBERON:0002405,6.46e-15,93;UBERON:0002390,3.90e-14,98;UBERON:0003061,3.90e-14,98;UBERON:0001434,7.63e-14,100;UBERON:0002193,8.72e-13,108;UBERON:0002204,4.54e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.822335776043652,0,0,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0,0.545812300115692,2.24723484445085,1.83650335422542,1.28371610830437,1.91801137739712,0,0,0,0.580418477257168,0.56738522469114,2.4912889959823,0,0,1.08594422352558,0.605399502633369,1.10483290796269,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0587323241913,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:76553904..76553912,+ | |||
}} |
Revision as of 16:06, 11 September 2013
Short description: | p@chr17:76553904..76553912, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:76553904..76553912, + |
Coexpression cluster: | C3057_Eosinophils_embryonic_CD14_gall_Smooth_Dendritic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.01e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.01e-34 | 42 |
defensive cell | 1.17e-29 | 48 |
phagocyte | 1.17e-29 | 48 |
myeloid leukocyte | 5.31e-24 | 72 |
monopoietic cell | 1.20e-23 | 59 |
monocyte | 1.20e-23 | 59 |
monoblast | 1.20e-23 | 59 |
promonocyte | 1.20e-23 | 59 |
macrophage dendritic cell progenitor | 7.19e-23 | 61 |
myeloid lineage restricted progenitor cell | 3.95e-21 | 66 |
granulocyte monocyte progenitor cell | 8.21e-21 | 67 |
myeloid cell | 6.83e-16 | 108 |
common myeloid progenitor | 6.83e-16 | 108 |
leukocyte | 1.63e-12 | 136 |
nongranular leukocyte | 5.59e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.85e-11 | 120 |
eosinophil | 1.43e-10 | 2 |
hematopoietic oligopotent progenitor cell | 1.78e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-10 | 161 |
hematopoietic stem cell | 5.18e-10 | 168 |
hematopoietic cell | 1.81e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.53e-18 | 76 |
bone element | 5.80e-17 | 82 |
skeletal element | 2.00e-15 | 90 |
immune system | 6.46e-15 | 93 |
hematopoietic system | 3.90e-14 | 98 |
blood island | 3.90e-14 | 98 |
skeletal system | 7.63e-14 | 100 |
hemolymphoid system | 8.72e-13 | 108 |
musculoskeletal system | 4.54e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.