FFCP PHASE1:Hg19::chr17:79919029..79919040,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=147111|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27106|TSSclassifier=S|UniProt=Q6P988|association_with_transcript=16bp_to_NM_178493,uc010wvg.1_5end|coexpression_cluster_id=C3699|description=CAGE_peak_2_at_NOTUM_5end|id=chr17:79919029..79919040,-|ontology_enrichment_celltype=CL:0000181!6.84e-10!12;CL:0000417!6.84e-10!12;CL:0000668!6.84e-10!12;CL:0000414!6.84e-10!12;CL:0000412!6.84e-10!12;CL:0000182!6.84e-10!12;CL:0002541!3.09e-09!3|ontology_enrichment_celltype_v019=CL:0002541;9.08e-25;3!CL:0000182;4.19e-16;12!CL:0000313;9.17e-09;1!CL:0000062;2.50e-08;9!CL:0000349;6.41e-07;19|ontology_enrichment_celltype_v019_2=CL:0002541,8.73e-25,3;CL:0000182,3.81e-16,12;CL:0000313,9.91e-09,1;CL:0000349,6.36e-07,19;CL:0000062,6.78e-07,11;CL:0000375,6.78e-07,11;CL:0000335,6.78e-07,11|ontology_enrichment_development_v019=UBERON:0004161;1.20e-17;11!UBERON:0009497;6.52e-15;13!UBERON:0001041;5.80e-12;30!UBERON:0003124;4.19e-09;1!UBERON:0003104;1.25e-08;31!CL:0000335;6.78e-07;11|ontology_enrichment_disease=DOID:305!4.62e-08!106;DOID:0050687!6.40e-07!143|ontology_enrichment_disease_v019=DOID:0050619;2.04e-09;1!DOID:1357;2.04e-09;1!DOID:2152;9.17e-09;1|ontology_enrichment_disease_v019_2=DOID:0050619,2.04e-09,1;DOID:1357,2.04e-09,1;DOID:2152,9.91e-09,1|ontology_enrichment_uberon=UBERON:0001737!8.52e-17!9;UBERON:0000476!3.09e-09!3;UBERON:0000920!3.09e-09!3;UBERON:0009497!2.03e-08!25;UBERON:0000015!2.03e-08!25;UBERON:0002423!2.03e-08!25;UBERON:0006235!2.03e-08!25;UBERON:0004161!2.03e-08!25;UBERON:0001041!2.15e-08!98;UBERON:0000077!2.16e-08!130;UBERON:0004921!2.50e-08!129;UBERON:0004185!2.50e-08!129;UBERON:0008835!4.95e-08!22;UBERON:0003894!4.95e-08!22;UBERON:0009854!1.33e-07!23;UBERON:0002107!1.44e-07!19;UBERON:0006925!1.44e-07!19;UBERON:0008836!1.44e-07!19;UBERON:0001557!3.76e-07!19;UBERON:0007499!7.60e-07!25|ontology_enrichment_uberon_v019=UBERON:0003124;9.08e-25;3!UBERON:0000920;9.08e-25;3!UBERON:0002423;2.58e-14;25!UBERON:0002107;3.18e-14;19!UBERON:0006925;3.18e-14;19!UBERON:0005631;4.77e-13;10!UBERON:0000158;4.77e-13;10!UBERON:0001764;2.04e-09;1!UBERON:0001825;2.04e-09;1!UBERON:0004911;9.17e-09;1!UBERON:0002171;9.17e-09;1!UBERON:0004913;9.17e-09;1!UBERON:0003703;9.17e-09;1!UBERON:0006518;9.17e-09;1!UBERON:0008949;9.17e-09;1!UBERON:0000101;9.17e-09;1!UBERON:0002167;9.17e-09;1!UBERON:0001174;9.17e-09;1!UBERON:0004914;9.17e-09;1!UBERON:0002365;2.55e-08;31!UBERON:0002330;2.55e-08;31!UBERON:0000478;3.93e-08;24!UBERON:0002368;6.59e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.73e-25,3;UBERON:0003124,1.81e-18,7;UBERON:0008835,2.09e-16,22;UBERON:0003894,2.09e-16,22;UBERON:0009854,1.17e-15,23;UBERON:0007499,2.40e-14,25;UBERON:0009497,2.40e-14,25;UBERON:0000015,2.40e-14,25;UBERON:0002423,2.40e-14,25;UBERON:0006235,2.40e-14,25;UBERON:0004161,2.40e-14,25;UBERON:0002107,3.00e-14,19;UBERON:0006925,3.00e-14,19;UBERON:0008836,3.00e-14,19;UBERON:0005631,4.33e-14,14;UBERON:0000158,4.33e-14,14;UBERON:0009856,9.17e-14,26;UBERON:0001764,2.04e-09,1;UBERON:0001825,2.04e-09,1;UBERON:0004913,8.49e-09,1;UBERON:0003703,8.49e-09,1;UBERON:0001174,8.49e-09,1;UBERON:0004914,8.49e-09,1;UBERON:0004911,9.91e-09,1;UBERON:0002171,1.07e-08,1;UBERON:0006518,1.07e-08,1;UBERON:0008949,1.07e-08,1;UBERON:0000101,1.07e-08,1;UBERON:0002167,1.07e-08,1;UBERON:0002365,1.53e-08,31;UBERON:0002330,1.53e-08,31;UBERON:0000478,3.90e-08,24;UBERON:0003929,4.59e-08,54;UBERON:0005911,8.80e-08,82;UBERON:0002368,1.66e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.946454400318751,0.842923450390509,0.964044119533928,0.661763836394364,0,0.474541238222193,0.404493924480493,0.98110732562673,0.769494313892781,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,12.1787388208397,8.16844049213821,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2209907826714,0.59392936166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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=147111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27106 | |||
|TSSclassifier=S | |||
|UniProt=Q6P988 | |||
|association_with_transcript=16bp_to_NM_178493,uc010wvg.1_5end | |||
|coexpression_cluster_id=C3699 | |||
|description=CAGE_peak_2_at_NOTUM_5end | |||
|id=chr17:79919029..79919040,- | |||
|ontology_enrichment_celltype=CL:0000181!6.84e-10!12;CL:0000417!6.84e-10!12;CL:0000668!6.84e-10!12;CL:0000414!6.84e-10!12;CL:0000412!6.84e-10!12;CL:0000182!6.84e-10!12;CL:0002541!3.09e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.08e-25;3!CL:0000182;4.19e-16;12!CL:0000313;9.17e-09;1!CL:0000062;2.50e-08;9!CL:0000349;6.41e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.73e-25,3;CL:0000182,3.81e-16,12;CL:0000313,9.91e-09,1;CL:0000349,6.36e-07,19;CL:0000062,6.78e-07,11;CL:0000375,6.78e-07,11;CL:0000335,6.78e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.20e-17;11!UBERON:0009497;6.52e-15;13!UBERON:0001041;5.80e-12;30!UBERON:0003124;4.19e-09;1!UBERON:0003104;1.25e-08;31!CL:0000335;6.78e-07;11 | |||
|ontology_enrichment_disease=DOID:305!4.62e-08!106;DOID:0050687!6.40e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.04e-09;1!DOID:1357;2.04e-09;1!DOID:2152;9.17e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.04e-09,1;DOID:1357,2.04e-09,1;DOID:2152,9.91e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.52e-17!9;UBERON:0000476!3.09e-09!3;UBERON:0000920!3.09e-09!3;UBERON:0009497!2.03e-08!25;UBERON:0000015!2.03e-08!25;UBERON:0002423!2.03e-08!25;UBERON:0006235!2.03e-08!25;UBERON:0004161!2.03e-08!25;UBERON:0001041!2.15e-08!98;UBERON:0000077!2.16e-08!130;UBERON:0004921!2.50e-08!129;UBERON:0004185!2.50e-08!129;UBERON:0008835!4.95e-08!22;UBERON:0003894!4.95e-08!22;UBERON:0009854!1.33e-07!23;UBERON:0002107!1.44e-07!19;UBERON:0006925!1.44e-07!19;UBERON:0008836!1.44e-07!19;UBERON:0001557!3.76e-07!19;UBERON:0007499!7.60e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.08e-25;3!UBERON:0000920;9.08e-25;3!UBERON:0002423;2.58e-14;25!UBERON:0002107;3.18e-14;19!UBERON:0006925;3.18e-14;19!UBERON:0005631;4.77e-13;10!UBERON:0000158;4.77e-13;10!UBERON:0001764;2.04e-09;1!UBERON:0001825;2.04e-09;1!UBERON:0004911;9.17e-09;1!UBERON:0002171;9.17e-09;1!UBERON:0004913;9.17e-09;1!UBERON:0003703;9.17e-09;1!UBERON:0006518;9.17e-09;1!UBERON:0008949;9.17e-09;1!UBERON:0000101;9.17e-09;1!UBERON:0002167;9.17e-09;1!UBERON:0001174;9.17e-09;1!UBERON:0004914;9.17e-09;1!UBERON:0002365;2.55e-08;31!UBERON:0002330;2.55e-08;31!UBERON:0000478;3.93e-08;24!UBERON:0002368;6.59e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.73e-25,3;UBERON:0003124,1.81e-18,7;UBERON:0008835,2.09e-16,22;UBERON:0003894,2.09e-16,22;UBERON:0009854,1.17e-15,23;UBERON:0007499,2.40e-14,25;UBERON:0009497,2.40e-14,25;UBERON:0000015,2.40e-14,25;UBERON:0002423,2.40e-14,25;UBERON:0006235,2.40e-14,25;UBERON:0004161,2.40e-14,25;UBERON:0002107,3.00e-14,19;UBERON:0006925,3.00e-14,19;UBERON:0008836,3.00e-14,19;UBERON:0005631,4.33e-14,14;UBERON:0000158,4.33e-14,14;UBERON:0009856,9.17e-14,26;UBERON:0001764,2.04e-09,1;UBERON:0001825,2.04e-09,1;UBERON:0004913,8.49e-09,1;UBERON:0003703,8.49e-09,1;UBERON:0001174,8.49e-09,1;UBERON:0004914,8.49e-09,1;UBERON:0004911,9.91e-09,1;UBERON:0002171,1.07e-08,1;UBERON:0006518,1.07e-08,1;UBERON:0008949,1.07e-08,1;UBERON:0000101,1.07e-08,1;UBERON:0002167,1.07e-08,1;UBERON:0002365,1.53e-08,31;UBERON:0002330,1.53e-08,31;UBERON:0000478,3.90e-08,24;UBERON:0003929,4.59e-08,54;UBERON:0005911,8.80e-08,82;UBERON:0002368,1.66e-07,35 | |||
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|short_description=p2@NOTUM | |||
}} |
Revision as of 16:30, 11 September 2013
Short description: | p2@NOTUM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NOTUM_5end |
Coexpression cluster: | C3699_small_chorionic_Saos2_maxillary_hepatocellular_amniotic_colon |
Association with transcript: | 16bp_to_NM_178493, uc010wvg.1_5end |
EntrezGene: | NOTUM |
HGNC: | 27106 |
UniProt: | Q6P988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.73e-25 | 3 |
hepatocyte | 3.81e-16 | 12 |
serous secreting cell | 9.91e-09 | 1 |
extraembryonic cell | 6.36e-07 | 19 |
osteoblast | 6.78e-07 | 11 |
osteoprogenitor cell | 6.78e-07 | 11 |
mesenchyme condensation cell | 6.78e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.73e-25 | 3 |
chorion | 1.81e-18 | 7 |
hepatic diverticulum | 2.09e-16 | 22 |
liver primordium | 2.09e-16 | 22 |
digestive tract diverticulum | 1.17e-15 | 23 |
epithelial sac | 2.40e-14 | 25 |
epithelium of foregut-midgut junction | 2.40e-14 | 25 |
anatomical boundary | 2.40e-14 | 25 |
hepatobiliary system | 2.40e-14 | 25 |
foregut-midgut junction | 2.40e-14 | 25 |
septum transversum | 2.40e-14 | 25 |
liver | 3.00e-14 | 19 |
digestive gland | 3.00e-14 | 19 |
liver bud | 3.00e-14 | 19 |
extraembryonic membrane | 4.33e-14 | 14 |
membranous layer | 4.33e-14 | 14 |
sac | 9.17e-14 | 26 |
maxillary sinus | 2.04e-09 | 1 |
paranasal sinus | 2.04e-09 | 1 |
hepatopancreatic ampulla | 8.49e-09 | 1 |
extrahepatic bile duct | 8.49e-09 | 1 |
common bile duct | 8.49e-09 | 1 |
duodenal papilla | 8.49e-09 | 1 |
epithelium of female gonad | 9.91e-09 | 1 |
lower lobe of right lung | 1.07e-08 | 1 |
right lung lobe | 1.07e-08 | 1 |
lower lobe of lung | 1.07e-08 | 1 |
lobe of lung | 1.07e-08 | 1 |
right lung | 1.07e-08 | 1 |
exocrine gland | 1.53e-08 | 31 |
exocrine system | 1.53e-08 | 31 |
extraembryonic structure | 3.90e-08 | 24 |
gut epithelium | 4.59e-08 | 54 |
endo-epithelium | 8.80e-08 | 82 |
endocrine gland | 1.66e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.04e-09 | 1 |
maxillary sinus cancer | 2.04e-09 | 1 |
ovary epithelial cancer | 9.91e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.