FFCP PHASE1:Hg19::chr18:11947513..11947529,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:11947513..11947529,+|id=chr18:11947513..11947529,+|ontology_enrichment_celltype=CL:0000860!4.22e-20!45;CL:0002057!3.34e-18!42;CL:0000839!5.29e-15!70;CL:0002194!1.31e-13!63;CL:0000576!1.31e-13!63;CL:0000040!1.31e-13!63;CL:0000559!1.31e-13!63;CL:0002009!1.34e-13!65;CL:0000557!2.20e-13!71;CL:0000766!7.44e-13!76;CL:0000763!8.36e-11!112;CL:0000049!8.36e-11!112;CL:0002031!1.17e-07!124;CL:0000738!6.15e-07!140|ontology_enrichment_celltype_v019=CL:0000860;7.36e-72;33!CL:0002057;7.36e-72;33!CL:0000473;1.60e-48;39!CL:0000234;1.60e-48;39!CL:0000576;6.40e-32;48!CL:0000766;2.99e-16;69!CL:0000763;9.92e-10;100!CL:0002087;1.39e-09;104!CL:0000764;4.35e-08;2!CL:0000558;4.35e-08;2|ontology_enrichment_celltype_v019_2=CL:0000860,8.95e-61,42;CL:0002057,8.95e-61,42;CL:0000473,2.76e-52,48;CL:0000234,2.76e-52,48;CL:0000839,2.88e-41,66;CL:0002194,2.09e-40,59;CL:0000576,2.09e-40,59;CL:0000040,2.09e-40,59;CL:0000559,2.09e-40,59;CL:0002009,7.13e-39,61;CL:0000557,8.09e-35,67;CL:0000766,5.97e-32,72;CL:0000763,2.69e-24,108;CL:0000049,2.69e-24,108;CL:0002031,9.53e-23,120;CL:0002087,1.24e-20,115;CL:0000037,6.16e-18,168;CL:0000738,8.28e-18,136;CL:0000988,1.30e-16,177;CL:0002032,2.80e-16,161;CL:0000837,2.80e-16,161;CL:0000134,2.02e-08,354;CL:0000764,3.38e-08,2;CL:0000765,3.38e-08,2;CL:0000050,3.38e-08,2;CL:0000038,3.38e-08,2;CL:0000558,3.38e-08,2;CL:0000547,3.38e-08,2;CL:0000549,3.38e-08,2;CL:0000550,3.38e-08,2;CL:0000552,3.38e-08,2;CL:0002320,4.41e-08,361;CL:0000219,6.84e-07,386|ontology_enrichment_development_v019=CL:0002057;4.15e-45;42!CL:0000049;5.77e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.26e-12!80;UBERON:0003081!2.96e-11!216;UBERON:0001474!9.81e-11!86;UBERON:0002390!2.83e-10!102;UBERON:0003061!2.83e-10!102;UBERON:0002193!2.07e-09!112;UBERON:0002405!2.52e-09!115;UBERON:0004765!2.46e-08!101;UBERON:0001434!2.46e-08!101;UBERON:0002204!8.18e-08!167;UBERON:0000926!3.89e-07!448;UBERON:0004120!3.89e-07!448;UBERON:0006603!3.89e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.50e-32,76;UBERON:0001474,1.14e-29,82;UBERON:0004765,2.00e-26,90;UBERON:0002405,2.38e-25,93;UBERON:0002390,1.05e-23,98;UBERON:0003061,1.05e-23,98;UBERON:0001434,4.28e-23,100;UBERON:0002193,7.11e-21,108;UBERON:0003081,1.21e-16,203;UBERON:0002204,3.03e-14,167;UBERON:0000926,8.21e-10,315;UBERON:0004120,8.21e-10,315;UBERON:0006603,8.21e-10,315;UBERON:0002384,1.28e-07,371|phase1_expression=0.54503513781167,1.07050261945492,0.281908808191942,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0.245733936501509,0,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0.376627918784408,0,0,0,0.393364276848904,0.767658796194425,0,1.83884244895785,0,0,0,0,3.81680571135301,0,0.401088894940283,0.651032612147555,0.223915474239924,0.32389366601898,0,1.30858414901608,2.26725566213286,0.970336244751265,1.85943229524548,1.23350366406548,2.78735733805593,2.3015391385772,3.33008918487831,2.12834006899727,2.75796544589295,3.87290810150296,0,2.07066573496865,6.82265375144614,1.57306439111559,2.14258724659632,2.24650318953266,1.91801137739712,1.9791078011203,2.19410023383795,1.70489900213078,4.06292934080018,5.10646702222026,3.11411124497787,4.01997864410789,2.08593167368081,2.38907729175628,3.02699751316684,1.84138817993782,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,0,0,0,1.14950487990897,0,0,0.569212969109448,0,0,2.64342657158052,0,0.790152254325231,0,0.393010762749165,0,0.167186495390678,0,0.473447805734733,1.94826728407911,0,0.589211814949674,0.221533894583621,0.270803863765016,0,0.520237390239513,0,0.276350017785848,0.289803085735052,0,0,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0.130979075497713,0,0.741568885568859,0,0,0,0.476981248610684,2.28797964312051,0,0.79504962946682,0.860234595106124,0.347140501607594,0,1.25849830862972,0,0.835979866147242,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0.450445921933289,1.53316637465883,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0.184099797284599,0.16164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,0,0,0.203974470572744,0,0,1.11598505450025,0.924351257262837,0.432626562123789,0,0.218531143927391,0.253397002022874,0,0,0.36757959813938,0,0,0,0,0.103432995861895,0.213233981900981,0,0.129177819672012,0.248298857183432,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.213454691755431,0,0.0898252021065869,0,0.122241444182866,0,1.99727032255654,0.402547587182052,0|short_description=p@chr18:11947513..11947529,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:11947513..11947529,+ | |||
|id=chr18:11947513..11947529,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.22e-20!45;CL:0002057!3.34e-18!42;CL:0000839!5.29e-15!70;CL:0002194!1.31e-13!63;CL:0000576!1.31e-13!63;CL:0000040!1.31e-13!63;CL:0000559!1.31e-13!63;CL:0002009!1.34e-13!65;CL:0000557!2.20e-13!71;CL:0000766!7.44e-13!76;CL:0000763!8.36e-11!112;CL:0000049!8.36e-11!112;CL:0002031!1.17e-07!124;CL:0000738!6.15e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.36e-72;33!CL:0002057;7.36e-72;33!CL:0000473;1.60e-48;39!CL:0000234;1.60e-48;39!CL:0000576;6.40e-32;48!CL:0000766;2.99e-16;69!CL:0000763;9.92e-10;100!CL:0002087;1.39e-09;104!CL:0000764;4.35e-08;2!CL:0000558;4.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.95e-61,42;CL:0002057,8.95e-61,42;CL:0000473,2.76e-52,48;CL:0000234,2.76e-52,48;CL:0000839,2.88e-41,66;CL:0002194,2.09e-40,59;CL:0000576,2.09e-40,59;CL:0000040,2.09e-40,59;CL:0000559,2.09e-40,59;CL:0002009,7.13e-39,61;CL:0000557,8.09e-35,67;CL:0000766,5.97e-32,72;CL:0000763,2.69e-24,108;CL:0000049,2.69e-24,108;CL:0002031,9.53e-23,120;CL:0002087,1.24e-20,115;CL:0000037,6.16e-18,168;CL:0000738,8.28e-18,136;CL:0000988,1.30e-16,177;CL:0002032,2.80e-16,161;CL:0000837,2.80e-16,161;CL:0000134,2.02e-08,354;CL:0000764,3.38e-08,2;CL:0000765,3.38e-08,2;CL:0000050,3.38e-08,2;CL:0000038,3.38e-08,2;CL:0000558,3.38e-08,2;CL:0000547,3.38e-08,2;CL:0000549,3.38e-08,2;CL:0000550,3.38e-08,2;CL:0000552,3.38e-08,2;CL:0002320,4.41e-08,361;CL:0000219,6.84e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-45;42!CL:0000049;5.77e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.26e-12!80;UBERON:0003081!2.96e-11!216;UBERON:0001474!9.81e-11!86;UBERON:0002390!2.83e-10!102;UBERON:0003061!2.83e-10!102;UBERON:0002193!2.07e-09!112;UBERON:0002405!2.52e-09!115;UBERON:0004765!2.46e-08!101;UBERON:0001434!2.46e-08!101;UBERON:0002204!8.18e-08!167;UBERON:0000926!3.89e-07!448;UBERON:0004120!3.89e-07!448;UBERON:0006603!3.89e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.50e-32,76;UBERON:0001474,1.14e-29,82;UBERON:0004765,2.00e-26,90;UBERON:0002405,2.38e-25,93;UBERON:0002390,1.05e-23,98;UBERON:0003061,1.05e-23,98;UBERON:0001434,4.28e-23,100;UBERON:0002193,7.11e-21,108;UBERON:0003081,1.21e-16,203;UBERON:0002204,3.03e-14,167;UBERON:0000926,8.21e-10,315;UBERON:0004120,8.21e-10,315;UBERON:0006603,8.21e-10,315;UBERON:0002384,1.28e-07,371 | |||
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| |||
|short_description=p@chr18:11947513..11947529,+ | |||
}} |
Revision as of 16:51, 11 September 2013
Short description: | p@chr18:11947513..11947529, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:11947513..11947529, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.50e-32 | 76 |
bone element | 1.14e-29 | 82 |
skeletal element | 2.00e-26 | 90 |
immune system | 2.38e-25 | 93 |
hematopoietic system | 1.05e-23 | 98 |
blood island | 1.05e-23 | 98 |
skeletal system | 4.28e-23 | 100 |
hemolymphoid system | 7.11e-21 | 108 |
lateral plate mesoderm | 1.21e-16 | 203 |
musculoskeletal system | 3.03e-14 | 167 |
mesoderm | 8.21e-10 | 315 |
mesoderm-derived structure | 8.21e-10 | 315 |
presumptive mesoderm | 8.21e-10 | 315 |
connective tissue | 1.28e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.