FFCP PHASE1:Hg19::chr19:12444440..12444455,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=147837|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30498|TSSclassifier=S|UniProt=Q8TA94|association_with_transcript=46bp_to_ENST00000293725_5end|description=CAGE_peak_1_at_ZNF563_5end|id=chr19:12444440..12444455,-|ontology_enrichment_celltype=CL:0000542!2.14e-13!53;CL:0000051!2.14e-13!53;CL:0000838!2.31e-13!52;CL:0000791!1.67e-10!18;CL:0000789!1.67e-10!18;CL:0002420!1.67e-10!18;CL:0002419!1.67e-10!18;CL:0000790!1.67e-10!18;CL:0000625!4.47e-08!11;CL:0000084!9.48e-08!25;CL:0000827!9.48e-08!25|ontology_enrichment_celltype_v019=CL:0000791;5.21e-14;18!CL:0000789;5.21e-14;18!CL:0002419;5.21e-14;18!CL:0000084;7.82e-12;25!CL:0000542;7.26e-11;53!CL:0000625;3.63e-10;11!CL:0000624;8.87e-07;6|ontology_enrichment_celltype_v019_2=CL:0000542,3.26e-17,53;CL:0000051,3.26e-17,53;CL:0000838,3.60e-17,52;CL:0000791,6.62e-14,18;CL:0000789,6.62e-14,18;CL:0002420,6.62e-14,18;CL:0002419,6.62e-14,18;CL:0000790,6.62e-14,18;CL:0000084,1.55e-11,25;CL:0000827,1.55e-11,25;CL:0000625,4.23e-10,11;CL:0000624,9.94e-07,6|ontology_enrichment_development_v019=CL:0000790;5.21e-14;18!CL:0000051;7.26e-11;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.74e-12!115;UBERON:0000178!1.53e-07!15;UBERON:0000179!1.53e-07!15;UBERON:0000463!1.53e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;5.55e-09;15!UBERON:0000179;5.55e-09;15!UBERON:0000463;5.55e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.39e-09,114;UBERON:0000178,4.69e-09,15;UBERON:0000179,4.69e-09,15;UBERON:0000463,4.69e-09,15|phase1_expression=1.99846217197612,1.49870366723688,0.986680828671798,3.00219895059391,1.34088328328186,1.74467704820074,0,1.26343974685366,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0.495065411840187,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0.492484232307152,0.408001382488506,0,0.286235987131057,0.136874425072884,0.87879847716362,1.06978768047132,0.903106483949403,0.944529375764151,1.96682138424452,0.767658796194425,0.928896739896456,0,0.30120591877825,0,5.03536803771961,1.13735385989937,0.880801318004542,0.553995408531877,1.40381113229099,1.95309783644267,0.223915474239924,0.971680998056939,0.257575567634187,0.581592955118259,0,0.242584061187816,0.464858073811369,0,0.619412741790207,0,0.256160706529101,0,0,1.29096936716765,1.35426486594342,0.188242339542605,0.272906150057846,0.674170453335254,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0.838634582033504,0.112328631146495,0,0.16072558669708,0.855038231223746,0.39783335439818,0.730656615058536,7.03984977845291,2.73069305631066,1.77901850772711,4.26730222566507,3.2031678962881,2.87376219977242,0.661044872784862,5.72432252721218,7.96898156753228,7.04684627245127,3.05818582500183,1.32171328579026,0.560508562981536,0.526768169550154,11.0157471263747,12.9693551707224,18.7097364089553,7.18901930179916,24.1182477308857,26.0396293154103,29.2240092611867,1.22551502573691,6.77593587192126,6.86755073209225,5.41607727530031,1.15282187753108,0.910415432919148,1.15106533222573,1.93445012450094,2.31842468588042,17.9426741426093,18.1927763101005,27.179236189294,0.679856056185397,11.4966148080576,13.7450978193052,8.34964983664359,8.28270077242652,5.20866763085135,3.8018081777935,8.88393202558859,10.3669155035079,7.49584359314075,7.34009481336452,8.21127996921047,6.45141578319144,4.27904313253612,7.38604459802275,0,0.670700859703636,0.895037932904712,0.361439152384566,0.50133791063589,0.724232594804119,2.3858578411533,0,0.378139268656271,0,0.351339142772504,1.0478326039817,0.728590576585084,0.741568885568859,1.9472843619281,4.87563264437948,1.86141144726411,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.225222960966644,0,0,0,0,3.87780264148325,0,0,0.886413581652058,1.58891016975863,1.72101972449288,0.354668382198357,0.560677600142307,1.06748995729705,0,0.311211035399766,0.404132016209064,1.30769522490767,0.302714855289863,0,0.234321431833797,0.936480230490962,0,0.298897361103602,0.704606991862589,0.485618833104395,0.421352420106746,0.408308342509787,0.122834317311768,0.929932030581889,1.18800285728205,0.247266929278557,0,0,0.673344455816265,0.625592599359821,0.554128230968366,0.877955241761676,0,0.45071417671979,0.340296549480063,1.07633781413317,1.2813443329114,1.69545520927649,1.50045548042201,0.824420233907511,1.28820270022815,0.930584281657949,0.675105328965065,1.36411807225678,2.27190396819703,0.644349290496095,0.80823028409406,0.710019185033229,1.10827308050404,0.339121184620975,1.73934767846967,0.545492241181669,2.00763216772303,0.243947412259191,0,0.580969714347592,0.518305275076852,0.504641701751257,0,0,1.28648187638577,0,0.928735856063958,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,8.87285243752816,3.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=147837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30498 | |||
|TSSclassifier=S | |||
|UniProt=Q8TA94 | |||
|association_with_transcript=46bp_to_ENST00000293725_5end | |||
|description=CAGE_peak_1_at_ZNF563_5end | |||
|id=chr19:12444440..12444455,- | |||
|ontology_enrichment_celltype=CL:0000542!2.14e-13!53;CL:0000051!2.14e-13!53;CL:0000838!2.31e-13!52;CL:0000791!1.67e-10!18;CL:0000789!1.67e-10!18;CL:0002420!1.67e-10!18;CL:0002419!1.67e-10!18;CL:0000790!1.67e-10!18;CL:0000625!4.47e-08!11;CL:0000084!9.48e-08!25;CL:0000827!9.48e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.21e-14;18!CL:0000789;5.21e-14;18!CL:0002419;5.21e-14;18!CL:0000084;7.82e-12;25!CL:0000542;7.26e-11;53!CL:0000625;3.63e-10;11!CL:0000624;8.87e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.26e-17,53;CL:0000051,3.26e-17,53;CL:0000838,3.60e-17,52;CL:0000791,6.62e-14,18;CL:0000789,6.62e-14,18;CL:0002420,6.62e-14,18;CL:0002419,6.62e-14,18;CL:0000790,6.62e-14,18;CL:0000084,1.55e-11,25;CL:0000827,1.55e-11,25;CL:0000625,4.23e-10,11;CL:0000624,9.94e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;5.21e-14;18!CL:0000051;7.26e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-12!115;UBERON:0000178!1.53e-07!15;UBERON:0000179!1.53e-07!15;UBERON:0000463!1.53e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.55e-09;15!UBERON:0000179;5.55e-09;15!UBERON:0000463;5.55e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.39e-09,114;UBERON:0000178,4.69e-09,15;UBERON:0000179,4.69e-09,15;UBERON:0000463,4.69e-09,15 | |||
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| |||
|short_description=p1@ZNF563 | |||
}} |
Revision as of 18:45, 11 September 2013
Short description: | p1@ZNF563 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ZNF563_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000293725_5end |
EntrezGene: | ZNF563 |
HGNC: | 30498 |
UniProt: | Q8TA94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.26e-17 | 53 |
common lymphoid progenitor | 3.26e-17 | 53 |
lymphoid lineage restricted progenitor cell | 3.60e-17 | 52 |
mature alpha-beta T cell | 6.62e-14 | 18 |
alpha-beta T cell | 6.62e-14 | 18 |
immature T cell | 6.62e-14 | 18 |
mature T cell | 6.62e-14 | 18 |
immature alpha-beta T cell | 6.62e-14 | 18 |
T cell | 1.55e-11 | 25 |
pro-T cell | 1.55e-11 | 25 |
CD8-positive, alpha-beta T cell | 4.23e-10 | 11 |
CD4-positive, alpha-beta T cell | 9.94e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.39e-09 | 114 |
blood | 4.69e-09 | 15 |
haemolymphatic fluid | 4.69e-09 | 15 |
organism substance | 4.69e-09 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.