FFCP PHASE1:Hg19::chr19:50004159..50004165,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=406942|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=31537|TSSclassifier=W|UniProt=|association_with_transcript=-34bp_to_ENST00000385048,NR_029703,uc010yaw.1_5end|coexpression_cluster_id=C23|description=CAGE_peak_1_at_MIR150_5end|id=chr19:50004159..50004165,-|ontology_enrichment_celltype=CL:0000738!3.81e-47!140;CL:0000037!8.80e-45!172;CL:0000566!8.80e-45!172;CL:0000838!1.61e-42!52;CL:0000542!2.30e-41!53;CL:0000051!2.30e-41!53;CL:0000988!1.89e-40!182;CL:0002032!2.74e-40!165;CL:0000837!2.74e-40!165;CL:0002087!5.20e-37!119;CL:0002031!2.41e-35!124;CL:0000084!1.99e-23!25;CL:0000827!1.99e-23!25;CL:0000791!2.67e-22!18;CL:0000789!2.67e-22!18;CL:0002420!2.67e-22!18;CL:0002419!2.67e-22!18;CL:0000790!2.67e-22!18;CL:0000945!9.20e-17!24;CL:0000826!9.20e-17!24;CL:0000236!5.56e-16!14;CL:0000625!3.50e-14!11;CL:0000763!1.39e-09!112;CL:0000049!1.39e-09!112;CL:0000624!9.58e-09!6;CL:0000766!1.85e-08!76;CL:0000134!9.48e-08!358;CL:0002320!3.85e-07!365;CL:0000094!4.82e-07!8|ontology_enrichment_celltype_v019=CL:0000791;6.99e-40;18!CL:0000789;6.99e-40;18!CL:0002419;6.99e-40;18!CL:0000084;1.29e-36;25!CL:0000542;7.45e-30;53!CL:0000625;7.44e-25;11!CL:0000236;2.78e-20;13!CL:0000624;8.98e-15;6!CL:0000945;2.36e-13;24!CL:0002087;6.36e-11;104!CL:0000094;3.50e-09;8!CL:0000898;1.31e-08;3!CL:0000623;6.96e-08;3!CL:0000767;4.96e-07;3!CL:0000738;5.97e-07;136!CL:0000226;6.08e-07;3!CL:0000842;6.08e-07;3|ontology_enrichment_celltype_v019_2=CL:0000838,2.48e-52,52;CL:0000542,3.98e-51,53;CL:0000051,3.98e-51,53;CL:0000791,6.69e-40,18;CL:0000789,6.69e-40,18;CL:0002420,6.69e-40,18;CL:0002419,6.69e-40,18;CL:0000790,6.69e-40,18;CL:0000738,8.54e-37,136;CL:0000084,1.13e-36,25;CL:0000827,1.13e-36,25;CL:0002087,3.71e-32,115;CL:0000037,4.81e-32,168;CL:0000988,1.32e-29,177;CL:0002032,2.02e-27,161;CL:0000837,2.02e-27,161;CL:0002031,3.15e-27,120;CL:0000625,7.53e-25,11;CL:0000236,7.51e-22,14;CL:0000624,8.27e-15,6;CL:0000945,2.17e-13,24;CL:0000826,2.17e-13,24;CL:0000094,3.21e-09,8;CL:0000898,1.28e-08,3;CL:0000623,7.04e-08,3;CL:0000825,7.04e-08,3;CL:0000134,2.20e-07,354;CL:0000767,4.60e-07,3;CL:0002320,5.54e-07,361;CL:0000226,6.22e-07,3;CL:0000842,6.22e-07,3|ontology_enrichment_development_v019=CL:0000790;6.99e-40;18!CL:0000051;7.45e-30;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.86e-15!112;UBERON:0002390!9.13e-14!102;UBERON:0003061!9.13e-14!102;UBERON:0000178!5.50e-10!15;UBERON:0000179!5.50e-10!15;UBERON:0000463!5.50e-10!15;UBERON:0002405!9.68e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;3.37e-18;15!UBERON:0000179;3.37e-18;15!UBERON:0000463;3.37e-18;15!UBERON:0002390;2.38e-12;32!UBERON:0002193;1.37e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.40e-18,15;UBERON:0000179,3.40e-18,15;UBERON:0000463,3.40e-18,15;UBERON:0002390,3.21e-08,98;UBERON:0003061,3.21e-08,98;UBERON:0002193,1.36e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,14.5544782434094,5.75744097145819,4.4896675761662,0,0,0,0.619737604642413,0,3.22960483268332,1.10799081706375,5.01361118675354,5.20826089718044,0.447830948479849,6.15397965436061,1.28787783817093,0.145398238779565,1.51150377475524,0,0.464858073811369,1.23350366406548,0.619412741790207,0.575384784644301,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0.224723484445085,0,0.641858054152187,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,1.47311054395026,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,17.5996244461323,22.3916830617474,26.6852776159066,9.38806489646316,20.8205913258726,26.4386122379062,23.1365705474702,31.483773899667,26.7530095481441,12.9192181661607,19.8782078625119,0,1.68152568894461,0.790152254325231,14.7532327585375,13.7553766962208,76.6893591268169,11.2014951911754,44.3254282621683,26.0396293154103,48.7066821019778,16.4887476190057,33.8796793596063,26.8056012446182,19.7686820548461,25.1058986662323,33.6853710180085,17.1015420787823,14.0938509070783,8.98389565778663,89.5650841498845,50.2976756808661,58.539893330787,14.1636678371958,97.7212258684899,91.4049004983796,71.3515531494998,28.3523218748446,27.3455050619696,19.9594929334159,8.73335690651082,13.0546343377507,33.7312961691334,19.1789574155654,17.243687935342,34.676359834654,28.8835411446188,30.4131248153878,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.715471872916026,1.14398982156026,0,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.576479813667846,0.6312121671319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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=406942 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31537 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_ENST00000385048,NR_029703,uc010yaw.1_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_1_at_MIR150_5end | |||
|id=chr19:50004159..50004165,- | |||
|ontology_enrichment_celltype=CL:0000738!3.81e-47!140;CL:0000037!8.80e-45!172;CL:0000566!8.80e-45!172;CL:0000838!1.61e-42!52;CL:0000542!2.30e-41!53;CL:0000051!2.30e-41!53;CL:0000988!1.89e-40!182;CL:0002032!2.74e-40!165;CL:0000837!2.74e-40!165;CL:0002087!5.20e-37!119;CL:0002031!2.41e-35!124;CL:0000084!1.99e-23!25;CL:0000827!1.99e-23!25;CL:0000791!2.67e-22!18;CL:0000789!2.67e-22!18;CL:0002420!2.67e-22!18;CL:0002419!2.67e-22!18;CL:0000790!2.67e-22!18;CL:0000945!9.20e-17!24;CL:0000826!9.20e-17!24;CL:0000236!5.56e-16!14;CL:0000625!3.50e-14!11;CL:0000763!1.39e-09!112;CL:0000049!1.39e-09!112;CL:0000624!9.58e-09!6;CL:0000766!1.85e-08!76;CL:0000134!9.48e-08!358;CL:0002320!3.85e-07!365;CL:0000094!4.82e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.99e-40;18!CL:0000789;6.99e-40;18!CL:0002419;6.99e-40;18!CL:0000084;1.29e-36;25!CL:0000542;7.45e-30;53!CL:0000625;7.44e-25;11!CL:0000236;2.78e-20;13!CL:0000624;8.98e-15;6!CL:0000945;2.36e-13;24!CL:0002087;6.36e-11;104!CL:0000094;3.50e-09;8!CL:0000898;1.31e-08;3!CL:0000623;6.96e-08;3!CL:0000767;4.96e-07;3!CL:0000738;5.97e-07;136!CL:0000226;6.08e-07;3!CL:0000842;6.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.48e-52,52;CL:0000542,3.98e-51,53;CL:0000051,3.98e-51,53;CL:0000791,6.69e-40,18;CL:0000789,6.69e-40,18;CL:0002420,6.69e-40,18;CL:0002419,6.69e-40,18;CL:0000790,6.69e-40,18;CL:0000738,8.54e-37,136;CL:0000084,1.13e-36,25;CL:0000827,1.13e-36,25;CL:0002087,3.71e-32,115;CL:0000037,4.81e-32,168;CL:0000988,1.32e-29,177;CL:0002032,2.02e-27,161;CL:0000837,2.02e-27,161;CL:0002031,3.15e-27,120;CL:0000625,7.53e-25,11;CL:0000236,7.51e-22,14;CL:0000624,8.27e-15,6;CL:0000945,2.17e-13,24;CL:0000826,2.17e-13,24;CL:0000094,3.21e-09,8;CL:0000898,1.28e-08,3;CL:0000623,7.04e-08,3;CL:0000825,7.04e-08,3;CL:0000134,2.20e-07,354;CL:0000767,4.60e-07,3;CL:0002320,5.54e-07,361;CL:0000226,6.22e-07,3;CL:0000842,6.22e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.99e-40;18!CL:0000051;7.45e-30;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.86e-15!112;UBERON:0002390!9.13e-14!102;UBERON:0003061!9.13e-14!102;UBERON:0000178!5.50e-10!15;UBERON:0000179!5.50e-10!15;UBERON:0000463!5.50e-10!15;UBERON:0002405!9.68e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.37e-18;15!UBERON:0000179;3.37e-18;15!UBERON:0000463;3.37e-18;15!UBERON:0002390;2.38e-12;32!UBERON:0002193;1.37e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.40e-18,15;UBERON:0000179,3.40e-18,15;UBERON:0000463,3.40e-18,15;UBERON:0002390,3.21e-08,98;UBERON:0003061,3.21e-08,98;UBERON:0002193,1.36e-07,108 | |||
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|short_description=p1@MIR150 | |||
}} |
Revision as of 21:48, 11 September 2013
Short description: | p1@MIR150 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MIR150_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -34bp_to_ENST00000385048, NR_029703, uc010yaw.1_5end |
EntrezGene: | MIR150 |
HGNC: | 31537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.48e-52 | 52 |
lymphocyte | 3.98e-51 | 53 |
common lymphoid progenitor | 3.98e-51 | 53 |
mature alpha-beta T cell | 6.69e-40 | 18 |
alpha-beta T cell | 6.69e-40 | 18 |
immature T cell | 6.69e-40 | 18 |
mature T cell | 6.69e-40 | 18 |
immature alpha-beta T cell | 6.69e-40 | 18 |
leukocyte | 8.54e-37 | 136 |
T cell | 1.13e-36 | 25 |
pro-T cell | 1.13e-36 | 25 |
nongranular leukocyte | 3.71e-32 | 115 |
hematopoietic stem cell | 4.81e-32 | 168 |
hematopoietic cell | 1.32e-29 | 177 |
hematopoietic oligopotent progenitor cell | 2.02e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.02e-27 | 161 |
hematopoietic lineage restricted progenitor cell | 3.15e-27 | 120 |
CD8-positive, alpha-beta T cell | 7.53e-25 | 11 |
B cell | 7.51e-22 | 14 |
CD4-positive, alpha-beta T cell | 8.27e-15 | 6 |
lymphocyte of B lineage | 2.17e-13 | 24 |
pro-B cell | 2.17e-13 | 24 |
granulocyte | 3.21e-09 | 8 |
naive T cell | 1.28e-08 | 3 |
natural killer cell | 7.04e-08 | 3 |
pro-NK cell | 7.04e-08 | 3 |
mesenchymal cell | 2.20e-07 | 354 |
basophil | 4.60e-07 | 3 |
connective tissue cell | 5.54e-07 | 361 |
single nucleate cell | 6.22e-07 | 3 |
mononuclear cell | 6.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.40e-18 | 15 |
haemolymphatic fluid | 3.40e-18 | 15 |
organism substance | 3.40e-18 | 15 |
hematopoietic system | 3.21e-08 | 98 |
blood island | 3.21e-08 | 98 |
hemolymphoid system | 1.36e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.