FFCP PHASE1:Hg19::chr19:54058073..54058088,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55422|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15489|TSSclassifier=S|UniProt=E7ETJ5,E7EPG5|association_with_transcript=0bp_to_ENST00000505949,ENST00000513265_5end|coexpression_cluster_id=C1827|description=CAGE_peak_1_at_ZNF331_5end|id=chr19:54058073..54058088,+|ontology_enrichment_celltype=CL:0000738!1.09e-20!140;CL:0002057!1.61e-17!42;CL:0000766!3.92e-17!76;CL:0002031!7.12e-16!124;CL:0000860!2.93e-15!45;CL:0000557!6.10e-15!71;CL:0002087!1.48e-14!119;CL:0000037!3.70e-13!172;CL:0000566!3.70e-13!172;CL:0000839!8.21e-13!70;CL:0002009!1.43e-12!65;CL:0000988!1.39e-11!182;CL:0002194!2.28e-11!63;CL:0000576!2.28e-11!63;CL:0000040!2.28e-11!63;CL:0000559!2.28e-11!63;CL:0002032!3.62e-11!165;CL:0000837!3.62e-11!165;CL:0000763!1.85e-08!112;CL:0000049!1.85e-08!112|ontology_enrichment_celltype_v019=CL:0000860;6.92e-14;33!CL:0002057;6.92e-14;33!CL:0000473;2.55e-11;39!CL:0000234;2.55e-11;39!CL:0000766;4.81e-10;69!CL:0000576;2.09e-08;48!CL:0000624;3.62e-08;6!CL:0000094;1.01e-07;8|ontology_enrichment_celltype_v019_2=CL:0000738,2.67e-24,136;CL:0000766,1.42e-19,72;CL:0002031,4.56e-17,120;CL:0000557,1.00e-16,67;CL:0000860,1.38e-16,42;CL:0002057,1.38e-16,42;CL:0000473,1.70e-16,48;CL:0000234,1.70e-16,48;CL:0000037,1.77e-16,168;CL:0002087,9.21e-16,115;CL:0000988,4.84e-15,177;CL:0002032,4.31e-14,161;CL:0000837,4.31e-14,161;CL:0000839,1.34e-13,66;CL:0002009,1.62e-13,61;CL:0002194,5.37e-12,59;CL:0000576,5.37e-12,59;CL:0000040,5.37e-12,59;CL:0000559,5.37e-12,59;CL:0000763,4.39e-11,108;CL:0000049,4.39e-11,108;CL:0000624,3.72e-08,6;CL:0000094,7.47e-08,8|ontology_enrichment_development_v019=CL:0002057;2.36e-12;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.38e-27!115;UBERON:0002371!1.67e-14!80;UBERON:0002390!2.70e-14!102;UBERON:0003061!2.70e-14!102;UBERON:0001474!6.56e-13!86;UBERON:0002193!8.42e-12!112;UBERON:0004765!2.85e-10!101;UBERON:0001434!2.85e-10!101;UBERON:0002405!2.98e-10!115;UBERON:0001049!1.24e-09!57;UBERON:0005068!1.24e-09!57;UBERON:0006241!1.24e-09!57;UBERON:0007135!1.24e-09!57;UBERON:0003080!3.55e-07!42;UBERON:0002780!8.72e-07!41;UBERON:0001890!8.72e-07!41;UBERON:0006240!8.72e-07!41;UBERON:0002616!9.11e-07!59|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.05e-19,114;UBERON:0002371,4.81e-15,76;UBERON:0002390,6.56e-15,98;UBERON:0003061,6.56e-15,98;UBERON:0001474,7.69e-14,82;UBERON:0002193,5.00e-12,108;UBERON:0002405,5.54e-12,93;UBERON:0004765,2.32e-11,90;UBERON:0001434,2.12e-09,100|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,24.388585164632,46.8271865678599,36.2269728559618,0,0,0,0,0,0.293600439334847,14.9578760303607,17.8484558248426,16.4928261744047,0.223915474239924,0.32389366601898,0.257575567634187,0.581592955118259,1.88937971844405,0.242584061187816,4.64858073811369,19.7360586250476,21.060033220867,8.91846416198666,11.5272317938095,6.85798466676897,23.7874519708267,64.5484683583826,39.2736811123591,11.1062980330137,12.0078706025452,13.9328560355952,31.8327248065739,63.2230183339904,49.2289586865262,0,0.997318288108159,0.426224750532694,1.7412554317715,4.53908179752912,2.4912889959823,15.0749199154046,20.3378338183879,11.5110087693712,1.21079900526674,6.62899744777616,0.316462387440884,3.16882929467913,1.4882300997553,0,8.31231870484064,3.15371474967163,0.964353520182481,2.28010194992999,0.19891667719909,0.365328307529268,1.75996244461323,1.09227722252426,0,0.426730222566507,0,1.72425731986345,1.32208974556972,0.954053754535364,50.0907412816315,69.2939883457708,103.213771593812,35.686258716337,47.6432278534306,0,67.2747413789309,70.7419372948496,91.9038700527806,0.167186495390678,86.3694006579015,62.0216625512501,66.2410876586898,0.111410456885174,50.0830042707223,25.0333300879492,35.204502289452,0.128091319725675,0.390178042679635,0,0.276350017785848,1.15921234294021,53.3831627383418,38.7934200730084,47.0409857122396,0,38.705269853794,49.8259795949813,42.0012688752375,1.27426165729639,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,90.7230344511296,75.1506950151656,65.4606305550251,0,0,0.639312809217652,0,0,0.434539556882471,0,0,0,0,0.702678285545008,2.16115474571226,0.364295288292542,0,0,0,0,50.0830311041218,26.3117658958859,30.4595151090243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,1.49091585508596,0,0.794455084879313,0.860509862246441,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0.597794722207204,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,13.7945706610864,0,126.470150479871,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55422 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15489 | |||
|TSSclassifier=S | |||
|UniProt=E7ETJ5,E7EPG5 | |||
|association_with_transcript=0bp_to_ENST00000505949,ENST00000513265_5end | |||
|coexpression_cluster_id=C1827 | |||
|description=CAGE_peak_1_at_ZNF331_5end | |||
|id=chr19:54058073..54058088,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.09e-20!140;CL:0002057!1.61e-17!42;CL:0000766!3.92e-17!76;CL:0002031!7.12e-16!124;CL:0000860!2.93e-15!45;CL:0000557!6.10e-15!71;CL:0002087!1.48e-14!119;CL:0000037!3.70e-13!172;CL:0000566!3.70e-13!172;CL:0000839!8.21e-13!70;CL:0002009!1.43e-12!65;CL:0000988!1.39e-11!182;CL:0002194!2.28e-11!63;CL:0000576!2.28e-11!63;CL:0000040!2.28e-11!63;CL:0000559!2.28e-11!63;CL:0002032!3.62e-11!165;CL:0000837!3.62e-11!165;CL:0000763!1.85e-08!112;CL:0000049!1.85e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.92e-14;33!CL:0002057;6.92e-14;33!CL:0000473;2.55e-11;39!CL:0000234;2.55e-11;39!CL:0000766;4.81e-10;69!CL:0000576;2.09e-08;48!CL:0000624;3.62e-08;6!CL:0000094;1.01e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.67e-24,136;CL:0000766,1.42e-19,72;CL:0002031,4.56e-17,120;CL:0000557,1.00e-16,67;CL:0000860,1.38e-16,42;CL:0002057,1.38e-16,42;CL:0000473,1.70e-16,48;CL:0000234,1.70e-16,48;CL:0000037,1.77e-16,168;CL:0002087,9.21e-16,115;CL:0000988,4.84e-15,177;CL:0002032,4.31e-14,161;CL:0000837,4.31e-14,161;CL:0000839,1.34e-13,66;CL:0002009,1.62e-13,61;CL:0002194,5.37e-12,59;CL:0000576,5.37e-12,59;CL:0000040,5.37e-12,59;CL:0000559,5.37e-12,59;CL:0000763,4.39e-11,108;CL:0000049,4.39e-11,108;CL:0000624,3.72e-08,6;CL:0000094,7.47e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.38e-27!115;UBERON:0002371!1.67e-14!80;UBERON:0002390!2.70e-14!102;UBERON:0003061!2.70e-14!102;UBERON:0001474!6.56e-13!86;UBERON:0002193!8.42e-12!112;UBERON:0004765!2.85e-10!101;UBERON:0001434!2.85e-10!101;UBERON:0002405!2.98e-10!115;UBERON:0001049!1.24e-09!57;UBERON:0005068!1.24e-09!57;UBERON:0006241!1.24e-09!57;UBERON:0007135!1.24e-09!57;UBERON:0003080!3.55e-07!42;UBERON:0002780!8.72e-07!41;UBERON:0001890!8.72e-07!41;UBERON:0006240!8.72e-07!41;UBERON:0002616!9.11e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.05e-19,114;UBERON:0002371,4.81e-15,76;UBERON:0002390,6.56e-15,98;UBERON:0003061,6.56e-15,98;UBERON:0001474,7.69e-14,82;UBERON:0002193,5.00e-12,108;UBERON:0002405,5.54e-12,93;UBERON:0004765,2.32e-11,90;UBERON:0001434,2.12e-09,100 | |||
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| |||
|short_description=p1@ZNF331 | |||
}} |
Revision as of 22:13, 11 September 2013
Short description: | p1@ZNF331 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ZNF331_5end |
Coexpression cluster: | C1827_Mast_CD19_immature_ovary_CD4_CD8_Peripheral |
Association with transcript: | 0bp_to_ENST00000505949, ENST00000513265_5end |
EntrezGene: | ZNF331 |
HGNC: | 15489 |
UniProt: | E7ETJ5E7EPG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.67e-24 | 136 |
myeloid leukocyte | 1.42e-19 | 72 |
hematopoietic lineage restricted progenitor cell | 4.56e-17 | 120 |
granulocyte monocyte progenitor cell | 1.00e-16 | 67 |
classical monocyte | 1.38e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-16 | 42 |
defensive cell | 1.70e-16 | 48 |
phagocyte | 1.70e-16 | 48 |
hematopoietic stem cell | 1.77e-16 | 168 |
nongranular leukocyte | 9.21e-16 | 115 |
hematopoietic cell | 4.84e-15 | 177 |
hematopoietic oligopotent progenitor cell | 4.31e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.31e-14 | 161 |
myeloid lineage restricted progenitor cell | 1.34e-13 | 66 |
macrophage dendritic cell progenitor | 1.62e-13 | 61 |
monopoietic cell | 5.37e-12 | 59 |
monocyte | 5.37e-12 | 59 |
monoblast | 5.37e-12 | 59 |
promonocyte | 5.37e-12 | 59 |
myeloid cell | 4.39e-11 | 108 |
common myeloid progenitor | 4.39e-11 | 108 |
CD4-positive, alpha-beta T cell | 3.72e-08 | 6 |
granulocyte | 7.47e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.05e-19 | 114 |
bone marrow | 4.81e-15 | 76 |
hematopoietic system | 6.56e-15 | 98 |
blood island | 6.56e-15 | 98 |
bone element | 7.69e-14 | 82 |
hemolymphoid system | 5.00e-12 | 108 |
immune system | 5.54e-12 | 93 |
skeletal element | 2.32e-11 | 90 |
skeletal system | 2.12e-09 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.