FFCP PHASE1:Hg19::chr1:1914706..1914716,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3|description=CAGE_peak_at_chr1:1914706..1914716,-|id=chr1:1914706..1914716,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;3.61e-34;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001869!2.31e-86!32;UBERON:0001893!3.33e-81!34;UBERON:0002780!1.73e-80!41;UBERON:0001890!1.73e-80!41;UBERON:0006240!1.73e-80!41;UBERON:0003080!1.61e-78!42;UBERON:0002791!6.37e-76!33;UBERON:0002020!1.21e-73!34;UBERON:0003528!1.21e-73!34;UBERON:0001950!2.11e-69!20;UBERON:0002619!4.05e-63!22;UBERON:0001049!2.83e-62!57;UBERON:0005068!2.83e-62!57;UBERON:0006241!2.83e-62!57;UBERON:0007135!2.83e-62!57;UBERON:0002616!4.70e-60!59;UBERON:0000956!1.67e-55!25;UBERON:0000203!1.67e-55!25;UBERON:0000955!1.50e-54!69;UBERON:0006238!1.50e-54!69;UBERON:0003056!3.64e-53!61;UBERON:0001017!1.56e-49!82;UBERON:0005743!4.49e-47!86;UBERON:0003075!7.37e-44!86;UBERON:0007284!7.37e-44!86;UBERON:0000073!2.77e-42!94;UBERON:0001016!2.77e-42!94;UBERON:0002346!9.84e-42!90;UBERON:0002420!1.26e-36!9;UBERON:0007245!1.26e-36!9;UBERON:0010009!1.26e-36!9;UBERON:0010011!1.26e-36!9;UBERON:0000454!1.26e-36!9;UBERON:0007023!6.42e-35!115;UBERON:0000033!1.24e-31!123;UBERON:0001871!4.01e-30!7;UBERON:0000153!5.70e-30!129;UBERON:0007811!5.70e-30!129;UBERON:0000369!4.28e-28!4;UBERON:0002435!4.28e-28!4;UBERON:0000204!4.28e-28!4;UBERON:0010082!4.28e-28!4;UBERON:0000200!6.41e-28!6;UBERON:0009663!1.44e-24!7;UBERON:0004121!8.16e-22!169;UBERON:0002021!8.48e-22!5;UBERON:0005383!1.38e-21!3;UBERON:0005382!1.38e-21!3;UBERON:0000924!3.28e-21!173;UBERON:0006601!3.28e-21!173;UBERON:0002771!4.43e-21!3;UBERON:0002308!4.43e-19!9;UBERON:0000125!4.43e-19!9;UBERON:0000025!6.35e-17!194;UBERON:0001873!4.89e-15!2;UBERON:0010122!4.89e-15!2;UBERON:0001876!1.20e-14!2;UBERON:0000349!6.28e-13!5;UBERON:0004111!1.01e-12!241;UBERON:0001872!1.40e-12!5;UBERON:0000064!8.28e-12!219;UBERON:0000477!4.58e-11!286;UBERON:0000483!6.14e-10!309;UBERON:0000119!8.53e-10!312;UBERON:0000475!1.81e-08!365;UBERON:0002022!2.19e-08!1;UBERON:0001874!2.71e-08!1;UBERON:0001882!2.90e-08!1;UBERON:0005403!2.90e-08!1;UBERON:0002581!3.83e-08!1;UBERON:0002902!5.40e-08!1;UBERON:0009899!5.40e-08!1;UBERON:0007190!8.69e-08!1;UBERON:0003112!9.29e-08!1;UBERON:0000032!9.29e-08!1;UBERON:0005253!9.29e-08!1;UBERON:0003128!9.29e-08!1;UBERON:0002241!9.29e-08!1;UBERON:0001703!9.29e-08!1;UBERON:0004761!9.29e-08!1;UBERON:0009617!9.29e-08!1;UBERON:0000481!2.38e-07!347|ontology_enrichment_uberon_v019=UBERON:0001873;3.61e-34;2!UBERON:0002360;5.96e-34;2!UBERON:0000094;5.96e-34;2!UBERON:0010743;5.96e-34;2!UBERON:0005383;2.62e-23;3!UBERON:0005382;2.62e-23;3!UBERON:0001870;3.66e-23;3!UBERON:0000369;7.35e-18;4!UBERON:0002435;7.35e-18;4!UBERON:0000204;7.35e-18;4!UBERON:0009663;8.16e-11;7!UBERON:0001017;1.19e-09;75!UBERON:0002420;1.04e-08;9!UBERON:0000125;1.04e-08;9!UBERON:0007245;1.04e-08;9!UBERON:0002308;1.04e-08;9!UBERON:0010009;1.04e-08;9!UBERON:0010011;1.04e-08;9!UBERON:0000454;1.04e-08;9!UBERON:0002791;1.23e-08;32!UBERON:0001869;1.23e-08;32!UBERON:0003528;1.23e-08;34!UBERON:0002020;1.23e-08;34!UBERON:0002780;5.48e-08;41!UBERON:0001890;5.48e-08;41!UBERON:0001893;5.52e-08;34|ontology_enrichment_uberon_v019_2=UBERON:0001873,3.61e-34,2;UBERON:0010122,3.61e-34,2;UBERON:0002360,5.04e-34,2;UBERON:0000094,5.04e-34,2;UBERON:0010743,5.04e-34,2;UBERON:0005383,2.62e-23,3;UBERON:0005382,2.62e-23,3;UBERON:0001870,4.09e-23,3;UBERON:0000369,7.35e-18,4;UBERON:0002435,7.35e-18,4;UBERON:0000204,7.35e-18,4;UBERON:0010082,7.35e-18,4;UBERON:0009663,8.16e-11,7;UBERON:0002791,3.95e-09,32;UBERON:0001869,3.95e-09,32;UBERON:0002420,1.04e-08,9;UBERON:0000125,1.04e-08,9;UBERON:0007245,1.04e-08,9;UBERON:0002308,1.04e-08,9;UBERON:0010009,1.04e-08,9;UBERON:0010011,1.04e-08,9;UBERON:0000454,1.04e-08,9;UBERON:0003528,1.14e-08,34;UBERON:0002020,1.14e-08,34;UBERON:0001893,1.14e-08,34;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.10e-07,41;UBERON:0001890,2.10e-07,41;UBERON:0003080,2.10e-07,41;UBERON:0006240,2.10e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_at_chr1:1914706..1914716,- | |||
|id=chr1:1914706..1914716,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.61e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.31e-86!32;UBERON:0001893!3.33e-81!34;UBERON:0002780!1.73e-80!41;UBERON:0001890!1.73e-80!41;UBERON:0006240!1.73e-80!41;UBERON:0003080!1.61e-78!42;UBERON:0002791!6.37e-76!33;UBERON:0002020!1.21e-73!34;UBERON:0003528!1.21e-73!34;UBERON:0001950!2.11e-69!20;UBERON:0002619!4.05e-63!22;UBERON:0001049!2.83e-62!57;UBERON:0005068!2.83e-62!57;UBERON:0006241!2.83e-62!57;UBERON:0007135!2.83e-62!57;UBERON:0002616!4.70e-60!59;UBERON:0000956!1.67e-55!25;UBERON:0000203!1.67e-55!25;UBERON:0000955!1.50e-54!69;UBERON:0006238!1.50e-54!69;UBERON:0003056!3.64e-53!61;UBERON:0001017!1.56e-49!82;UBERON:0005743!4.49e-47!86;UBERON:0003075!7.37e-44!86;UBERON:0007284!7.37e-44!86;UBERON:0000073!2.77e-42!94;UBERON:0001016!2.77e-42!94;UBERON:0002346!9.84e-42!90;UBERON:0002420!1.26e-36!9;UBERON:0007245!1.26e-36!9;UBERON:0010009!1.26e-36!9;UBERON:0010011!1.26e-36!9;UBERON:0000454!1.26e-36!9;UBERON:0007023!6.42e-35!115;UBERON:0000033!1.24e-31!123;UBERON:0001871!4.01e-30!7;UBERON:0000153!5.70e-30!129;UBERON:0007811!5.70e-30!129;UBERON:0000369!4.28e-28!4;UBERON:0002435!4.28e-28!4;UBERON:0000204!4.28e-28!4;UBERON:0010082!4.28e-28!4;UBERON:0000200!6.41e-28!6;UBERON:0009663!1.44e-24!7;UBERON:0004121!8.16e-22!169;UBERON:0002021!8.48e-22!5;UBERON:0005383!1.38e-21!3;UBERON:0005382!1.38e-21!3;UBERON:0000924!3.28e-21!173;UBERON:0006601!3.28e-21!173;UBERON:0002771!4.43e-21!3;UBERON:0002308!4.43e-19!9;UBERON:0000125!4.43e-19!9;UBERON:0000025!6.35e-17!194;UBERON:0001873!4.89e-15!2;UBERON:0010122!4.89e-15!2;UBERON:0001876!1.20e-14!2;UBERON:0000349!6.28e-13!5;UBERON:0004111!1.01e-12!241;UBERON:0001872!1.40e-12!5;UBERON:0000064!8.28e-12!219;UBERON:0000477!4.58e-11!286;UBERON:0000483!6.14e-10!309;UBERON:0000119!8.53e-10!312;UBERON:0000475!1.81e-08!365;UBERON:0002022!2.19e-08!1;UBERON:0001874!2.71e-08!1;UBERON:0001882!2.90e-08!1;UBERON:0005403!2.90e-08!1;UBERON:0002581!3.83e-08!1;UBERON:0002902!5.40e-08!1;UBERON:0009899!5.40e-08!1;UBERON:0007190!8.69e-08!1;UBERON:0003112!9.29e-08!1;UBERON:0000032!9.29e-08!1;UBERON:0005253!9.29e-08!1;UBERON:0003128!9.29e-08!1;UBERON:0002241!9.29e-08!1;UBERON:0001703!9.29e-08!1;UBERON:0004761!9.29e-08!1;UBERON:0009617!9.29e-08!1;UBERON:0000481!2.38e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;3.61e-34;2!UBERON:0002360;5.96e-34;2!UBERON:0000094;5.96e-34;2!UBERON:0010743;5.96e-34;2!UBERON:0005383;2.62e-23;3!UBERON:0005382;2.62e-23;3!UBERON:0001870;3.66e-23;3!UBERON:0000369;7.35e-18;4!UBERON:0002435;7.35e-18;4!UBERON:0000204;7.35e-18;4!UBERON:0009663;8.16e-11;7!UBERON:0001017;1.19e-09;75!UBERON:0002420;1.04e-08;9!UBERON:0000125;1.04e-08;9!UBERON:0007245;1.04e-08;9!UBERON:0002308;1.04e-08;9!UBERON:0010009;1.04e-08;9!UBERON:0010011;1.04e-08;9!UBERON:0000454;1.04e-08;9!UBERON:0002791;1.23e-08;32!UBERON:0001869;1.23e-08;32!UBERON:0003528;1.23e-08;34!UBERON:0002020;1.23e-08;34!UBERON:0002780;5.48e-08;41!UBERON:0001890;5.48e-08;41!UBERON:0001893;5.52e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,3.61e-34,2;UBERON:0010122,3.61e-34,2;UBERON:0002360,5.04e-34,2;UBERON:0000094,5.04e-34,2;UBERON:0010743,5.04e-34,2;UBERON:0005383,2.62e-23,3;UBERON:0005382,2.62e-23,3;UBERON:0001870,4.09e-23,3;UBERON:0000369,7.35e-18,4;UBERON:0002435,7.35e-18,4;UBERON:0000204,7.35e-18,4;UBERON:0010082,7.35e-18,4;UBERON:0009663,8.16e-11,7;UBERON:0002791,3.95e-09,32;UBERON:0001869,3.95e-09,32;UBERON:0002420,1.04e-08,9;UBERON:0000125,1.04e-08,9;UBERON:0007245,1.04e-08,9;UBERON:0002308,1.04e-08,9;UBERON:0010009,1.04e-08,9;UBERON:0010011,1.04e-08,9;UBERON:0000454,1.04e-08,9;UBERON:0003528,1.14e-08,34;UBERON:0002020,1.14e-08,34;UBERON:0001893,1.14e-08,34;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.10e-07,41;UBERON:0001890,2.10e-07,41;UBERON:0003080,2.10e-07,41;UBERON:0006240,2.10e-07,41 | |||
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|short_description=p@chr1:1914706..1914716,- | |||
}} |
Revision as of 02:26, 12 September 2013
Short description: | p@chr1:1914706..1914716, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:1914706..1914716, - |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 3.61e-34 | 2 |
future caudate nucleus | 3.61e-34 | 2 |
meninx | 5.04e-34 | 2 |
membrane organ | 5.04e-34 | 2 |
meningeal cluster | 5.04e-34 | 2 |
caudate-putamen | 2.62e-23 | 3 |
dorsal striatum | 2.62e-23 | 3 |
frontal cortex | 4.09e-23 | 3 |
corpus striatum | 7.35e-18 | 4 |
striatum | 7.35e-18 | 4 |
ventral part of telencephalon | 7.35e-18 | 4 |
future corpus striatum | 7.35e-18 | 4 |
telencephalic nucleus | 8.16e-11 | 7 |
regional part of telencephalon | 3.95e-09 | 32 |
cerebral hemisphere | 3.95e-09 | 32 |
basal ganglion | 1.04e-08 | 9 |
neural nucleus | 1.04e-08 | 9 |
nuclear complex of neuraxis | 1.04e-08 | 9 |
nucleus of brain | 1.04e-08 | 9 |
aggregate regional part of brain | 1.04e-08 | 9 |
collection of basal ganglia | 1.04e-08 | 9 |
cerebral subcortex | 1.04e-08 | 9 |
brain grey matter | 1.14e-08 | 34 |
gray matter | 1.14e-08 | 34 |
telencephalon | 1.14e-08 | 34 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.10e-07 | 41 |
forebrain | 2.10e-07 | 41 |
anterior neural tube | 2.10e-07 | 41 |
future forebrain | 2.10e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.