FFCP PHASE1:Hg19::chr1:26697189..26697205,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=257101|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28495|TSSclassifier=S|UniProt=|association_with_transcript=30bp_to_ENST00000451801_5end|coexpression_cluster_id=C98|description=CAGE_peak_2_at_ZNF683_5end|id=chr1:26697189..26697205,-|ontology_enrichment_celltype=CL:0000084!1.47e-24!25;CL:0000827!1.47e-24!25;CL:0000625!1.65e-24!11;CL:0000791!6.66e-22!18;CL:0000789!6.66e-22!18;CL:0002420!6.66e-22!18;CL:0002419!6.66e-22!18;CL:0000790!6.66e-22!18;CL:0000738!1.38e-20!140;CL:0000838!6.74e-20!52;CL:0000542!2.23e-19!53;CL:0000051!2.23e-19!53;CL:0000037!4.20e-17!172;CL:0000566!4.20e-17!172;CL:0002087!1.92e-15!119;CL:0000988!2.04e-15!182;CL:0002032!2.61e-15!165;CL:0000837!2.61e-15!165;CL:0002031!3.40e-14!124;CL:0000623!4.88e-08!3;CL:0000825!4.88e-08!3;CL:0000842!1.63e-07!3;CL:0000767!1.89e-07!3|ontology_enrichment_celltype_v019=CL:0000625;1.31e-58;11!CL:0000791;2.16e-41;18!CL:0000789;2.16e-41;18!CL:0002419;2.16e-41;18!CL:0000084;4.66e-34;25!CL:0000623;1.37e-17;3!CL:0000226;2.81e-16;3!CL:0000842;2.81e-16;3!CL:0000542;9.54e-14;53!CL:0002393;2.29e-08;6!CL:0002397;2.29e-08;6!CL:0000767;4.17e-08;3!CL:0002087;9.65e-07;104|ontology_enrichment_celltype_v019_2=CL:0000625,1.35e-58,11;CL:0000791,1.88e-41,18;CL:0000789,1.88e-41,18;CL:0002420,1.88e-41,18;CL:0002419,1.88e-41,18;CL:0000790,1.88e-41,18;CL:0000084,4.73e-34,25;CL:0000827,4.73e-34,25;CL:0000838,1.63e-26,52;CL:0000542,6.07e-26,53;CL:0000051,6.07e-26,53;CL:0000738,6.77e-21,136;CL:0002087,1.84e-19,115;CL:0000623,1.41e-17,3;CL:0000825,1.41e-17,3;CL:0000037,2.37e-17,168;CL:0000226,2.74e-16,3;CL:0000842,2.74e-16,3;CL:0000988,3.51e-16,177;CL:0002031,5.85e-15,120;CL:0002032,7.51e-14,161;CL:0000837,7.51e-14,161;CL:0000767,3.43e-08,3|ontology_enrichment_development_v019=CL:0000790;2.16e-41;18!CL:0000051;9.54e-14;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!3.21e-16!15;UBERON:0000179!3.21e-16!15;UBERON:0000463!3.21e-16!15;UBERON:0007023!1.09e-14!115;UBERON:0002390!4.58e-09!102;UBERON:0003061!4.58e-09!102;UBERON:0002193!2.46e-08!112|ontology_enrichment_uberon_v019=UBERON:0000178;4.96e-40;15!UBERON:0000179;4.96e-40;15!UBERON:0000463;4.96e-40;15!UBERON:0002390;2.70e-19;32!UBERON:0002193;1.79e-11;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.97e-40,15;UBERON:0000179,4.97e-40,15;UBERON:0000463,4.97e-40,15;UBERON:0002390,5.86e-10,98;UBERON:0003061,5.86e-10,98;UBERON:0002193,9.58e-09,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,16.8884935162774,0.464448369948228,0,0,0,0,0,0,1.10799081706375,7.01905566145496,1.73608696572681,0.447830948479849,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,2.66852776159066,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,3.92355994087075,0,0,1.96505381374582,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0,0,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,3.54227568827304,3.18565414324097,3.90650072313851,5.70271226669025,9.48623250189969,11.7747682262065,12.4930726552346,4.2619905367923,12.3169199538157,15.3221124850797,40.9183499548766,8.83428863685074,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,29.9486755506929,27.3847020071587,6.54549485026717,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,1.94142780736755,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,1.70894156152249,3.81170840732462,6.58179636937911,1.29694662238543,2.70015718619057,4.75875105776562,0,0,0,0,0,0.853702120180969,0,0.59873811429845,0,1.2700414963433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.39997479170986,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,1.22718928688412,0.124149428591716,0,0.190941474834495,0,0.435433495793923,0,0.202056159043763,0.430333232356058,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0|short_description=p2@ZNF683}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=257101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28495 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENST00000451801_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_2_at_ZNF683_5end | |||
|id=chr1:26697189..26697205,- | |||
|ontology_enrichment_celltype=CL:0000084!1.47e-24!25;CL:0000827!1.47e-24!25;CL:0000625!1.65e-24!11;CL:0000791!6.66e-22!18;CL:0000789!6.66e-22!18;CL:0002420!6.66e-22!18;CL:0002419!6.66e-22!18;CL:0000790!6.66e-22!18;CL:0000738!1.38e-20!140;CL:0000838!6.74e-20!52;CL:0000542!2.23e-19!53;CL:0000051!2.23e-19!53;CL:0000037!4.20e-17!172;CL:0000566!4.20e-17!172;CL:0002087!1.92e-15!119;CL:0000988!2.04e-15!182;CL:0002032!2.61e-15!165;CL:0000837!2.61e-15!165;CL:0002031!3.40e-14!124;CL:0000623!4.88e-08!3;CL:0000825!4.88e-08!3;CL:0000842!1.63e-07!3;CL:0000767!1.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.31e-58;11!CL:0000791;2.16e-41;18!CL:0000789;2.16e-41;18!CL:0002419;2.16e-41;18!CL:0000084;4.66e-34;25!CL:0000623;1.37e-17;3!CL:0000226;2.81e-16;3!CL:0000842;2.81e-16;3!CL:0000542;9.54e-14;53!CL:0002393;2.29e-08;6!CL:0002397;2.29e-08;6!CL:0000767;4.17e-08;3!CL:0002087;9.65e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.35e-58,11;CL:0000791,1.88e-41,18;CL:0000789,1.88e-41,18;CL:0002420,1.88e-41,18;CL:0002419,1.88e-41,18;CL:0000790,1.88e-41,18;CL:0000084,4.73e-34,25;CL:0000827,4.73e-34,25;CL:0000838,1.63e-26,52;CL:0000542,6.07e-26,53;CL:0000051,6.07e-26,53;CL:0000738,6.77e-21,136;CL:0002087,1.84e-19,115;CL:0000623,1.41e-17,3;CL:0000825,1.41e-17,3;CL:0000037,2.37e-17,168;CL:0000226,2.74e-16,3;CL:0000842,2.74e-16,3;CL:0000988,3.51e-16,177;CL:0002031,5.85e-15,120;CL:0002032,7.51e-14,161;CL:0000837,7.51e-14,161;CL:0000767,3.43e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.16e-41;18!CL:0000051;9.54e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.21e-16!15;UBERON:0000179!3.21e-16!15;UBERON:0000463!3.21e-16!15;UBERON:0007023!1.09e-14!115;UBERON:0002390!4.58e-09!102;UBERON:0003061!4.58e-09!102;UBERON:0002193!2.46e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.96e-40;15!UBERON:0000179;4.96e-40;15!UBERON:0000463;4.96e-40;15!UBERON:0002390;2.70e-19;32!UBERON:0002193;1.79e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.97e-40,15;UBERON:0000179,4.97e-40,15;UBERON:0000463,4.97e-40,15;UBERON:0002390,5.86e-10,98;UBERON:0003061,5.86e-10,98;UBERON:0002193,9.58e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,16.8884935162774,0.464448369948228,0,0,0,0,0,0,1.10799081706375,7.01905566145496,1.73608696572681,0.447830948479849,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,2.66852776159066,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,3.92355994087075,0,0,1.96505381374582,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0,0,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,3.54227568827304,3.18565414324097,3.90650072313851,5.70271226669025,9.48623250189969,11.7747682262065,12.4930726552346,4.2619905367923,12.3169199538157,15.3221124850797,40.9183499548766,8.83428863685074,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,29.9486755506929,27.3847020071587,6.54549485026717,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,1.94142780736755,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,1.70894156152249,3.81170840732462,6.58179636937911,1.29694662238543,2.70015718619057,4.75875105776562,0,0,0,0,0,0.853702120180969,0,0.59873811429845,0,1.2700414963433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.39997479170986,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,1.22718928688412,0.124149428591716,0,0.190941474834495,0,0.435433495793923,0,0.202056159043763,0.430333232356058,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p2@ZNF683 | |||
}} |
Revision as of 04:59, 12 September 2013
Short description: | p2@ZNF683 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ZNF683_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 30bp_to_ENST00000451801_5end |
EntrezGene: | ZNF683 |
HGNC: | 28495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.35e-58 | 11 |
mature alpha-beta T cell | 1.88e-41 | 18 |
alpha-beta T cell | 1.88e-41 | 18 |
immature T cell | 1.88e-41 | 18 |
mature T cell | 1.88e-41 | 18 |
immature alpha-beta T cell | 1.88e-41 | 18 |
T cell | 4.73e-34 | 25 |
pro-T cell | 4.73e-34 | 25 |
lymphoid lineage restricted progenitor cell | 1.63e-26 | 52 |
lymphocyte | 6.07e-26 | 53 |
common lymphoid progenitor | 6.07e-26 | 53 |
leukocyte | 6.77e-21 | 136 |
nongranular leukocyte | 1.84e-19 | 115 |
natural killer cell | 1.41e-17 | 3 |
pro-NK cell | 1.41e-17 | 3 |
hematopoietic stem cell | 2.37e-17 | 168 |
single nucleate cell | 2.74e-16 | 3 |
mononuclear cell | 2.74e-16 | 3 |
hematopoietic cell | 3.51e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 5.85e-15 | 120 |
hematopoietic oligopotent progenitor cell | 7.51e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.51e-14 | 161 |
basophil | 3.43e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.97e-40 | 15 |
haemolymphatic fluid | 4.97e-40 | 15 |
organism substance | 4.97e-40 | 15 |
hematopoietic system | 5.86e-10 | 98 |
blood island | 5.86e-10 | 98 |
hemolymphoid system | 9.58e-09 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.