FFCP PHASE1:Hg19::chr1:86889803..86889833,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9635|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2016|TSSclassifier=S|UniProt=Q9UQC9,E7EUD9|association_with_transcript=34bp_to_ENST00000370565,ENST00000439777,NM_006536,uc001dlr.3_5end|coexpression_cluster_id=C2603|description=CAGE_peak_2_at_CLCA2_5end|id=chr1:86889803..86889833,+|ontology_enrichment_celltype=CL:0002076!5.15e-17!43;CL:0000066!5.18e-12!254;CL:0002159!9.96e-12!13;CL:0002251!4.47e-11!21;CL:0000223!8.40e-11!59;CL:0002077!1.69e-09!33;CL:0000076!2.63e-09!62;CL:0002368!3.88e-09!13;CL:0000622!1.17e-07!5;CL:0000197!3.48e-07!6;CL:0000098!3.48e-07!6;CL:0002167!3.48e-07!6|ontology_enrichment_celltype_v019=CL:0002076;5.13e-20;42!CL:0002159;2.37e-19;14!CL:0002368;2.46e-16;13!CL:0002251;1.55e-14;20!CL:0000622;1.31e-12;5!CL:0002327;1.65e-10;4!CL:0002077;1.84e-10;34!CL:0000154;2.03e-10;6!CL:0000362;1.94e-09;9!CL:0000244;2.46e-09;4!CL:0000731;2.46e-09;4!CL:0002621;1.02e-08;3!CL:0002166;1.04e-08;3!CL:0002202;1.26e-08;9!CL:0002632;1.26e-08;9!CL:0002623;5.58e-08;3!CL:0000307;9.62e-08;3!CL:0002328;2.90e-07;3!CL:0000240;5.27e-07;6!CL:0000311;5.27e-07;6!CL:0000079;5.27e-07;6!CL:0000237;5.27e-07;6!CL:0000150;9.10e-07;9|ontology_enrichment_celltype_v019_2=CL:0002076,3.22e-26,42;CL:0002159,2.42e-19,14;CL:0000223,1.32e-18,58;CL:0002368,2.47e-16,13;CL:0000066,5.61e-16,253;CL:0002251,1.53e-14,20;CL:0000622,1.31e-12,5;CL:0002077,3.12e-12,34;CL:0002327,1.63e-10,4;CL:0000154,2.03e-10,6;CL:0000362,1.95e-09,9;CL:0000244,2.81e-09,4;CL:0000731,2.81e-09,4;CL:0002621,1.02e-08,3;CL:0002166,1.04e-08,3;CL:0002202,1.28e-08,9;CL:0002632,1.28e-08,9;CL:0002623,5.58e-08,3;CL:0000068,9.73e-08,3;CL:0000069,9.73e-08,3;CL:0000307,9.73e-08,3;CL:0000377,9.73e-08,3;CL:0000076,2.37e-07,63;CL:0002328,2.93e-07,3;CL:0000240,5.27e-07,6;CL:0000311,5.27e-07,6;CL:0000079,5.27e-07,6;CL:0000237,5.27e-07,6;CL:0000036,5.27e-07,6;CL:0000357,5.27e-07,6;CL:0000114,5.27e-07,6;CL:0002321,8.30e-07,250;CL:0000150,9.10e-07,9|ontology_enrichment_development_v019=CL:0000223;2.41e-10;58!CL:0000377;9.62e-08;3!CL:0000357;5.27e-07;6!CL:0000114;5.27e-07;6|ontology_enrichment_disease=DOID:1749!1.01e-08!14|ontology_enrichment_disease_v019=DOID:1749;4.03e-07;14|ontology_enrichment_disease_v019_2=DOID:1749,3.77e-07,14|ontology_enrichment_uberon=UBERON:0000165!1.10e-17!28;UBERON:0000930!1.10e-17!28;UBERON:0003102!1.36e-16!95;UBERON:0000166!2.51e-16!21;UBERON:0000161!1.01e-14!35;UBERON:0001004!4.13e-14!72;UBERON:0001444!3.88e-10!48;UBERON:0001828!1.26e-09!8;UBERON:0004119!1.47e-09!169;UBERON:0000925!1.47e-09!169;UBERON:0006595!1.47e-09!169;UBERON:0000065!9.87e-07!53|ontology_enrichment_uberon_v019=UBERON:0000165;1.43e-15;28!UBERON:0000161;2.06e-15;19!UBERON:0000166;2.06e-15;19!UBERON:0003729;2.22e-13;13!UBERON:0000486;2.20e-11;12!UBERON:0001911;1.65e-10;4!UBERON:0001828;3.65e-10;8!UBERON:0000344;5.85e-10;20!UBERON:0001003;5.83e-09;15!UBERON:0007376;5.83e-09;15!UBERON:0001949;1.02e-08;3!UBERON:0000365;1.85e-07;5!UBERON:0004815;2.90e-07;3!UBERON:0002031;2.90e-07;3!UBERON:0010371;5.29e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.88e-18,99;UBERON:0000166,6.89e-18,22;UBERON:0000165,7.14e-15,29;UBERON:0000930,7.14e-15,29;UBERON:0000161,1.24e-14,36;UBERON:0001004,2.89e-14,74;UBERON:0003729,2.38e-13,13;UBERON:0000033,7.95e-12,56;UBERON:0000153,2.06e-11,62;UBERON:0007811,2.06e-11,62;UBERON:0001911,1.63e-10,4;UBERON:0005333,1.63e-10,4;UBERON:0008425,1.63e-10,4;UBERON:0005311,1.63e-10,4;UBERON:0004119,2.23e-10,160;UBERON:0000925,2.23e-10,160;UBERON:0006595,2.23e-10,160;UBERON:0001828,4.07e-10,8;UBERON:0000344,6.17e-10,20;UBERON:0001444,1.35e-09,49;UBERON:0001003,5.77e-09,15;UBERON:0007376,5.77e-09,15;UBERON:0007383,5.77e-09,15;UBERON:0001949,1.02e-08,3;UBERON:0000365,2.06e-07,5;UBERON:0004815,2.93e-07,3;UBERON:0002031,2.93e-07,3|phase1_expression=0.181678379270557,2.14100523890983,1.26858963686374,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,3.67768489791571,5.12050061923025,9.61360426433648,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,4.37154345951051,12.977455497455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0.12663051166458,2.51577443545116,3.72887606973458,0.354668382198357,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,2.24569588380383,0.245668634623536,3.09977343527296,2.37600571456411,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0,0.276149695926898,7.27407255684654,0.710019185033229,0,0,122.140859199204,154.101558133822,99.2343900045953,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.928735856063958,3.60939740834793,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9635 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2016 | |||
|TSSclassifier=S | |||
|UniProt=Q9UQC9,E7EUD9 | |||
|association_with_transcript=34bp_to_ENST00000370565,ENST00000439777,NM_006536,uc001dlr.3_5end | |||
|coexpression_cluster_id=C2603 | |||
|description=CAGE_peak_2_at_CLCA2_5end | |||
|id=chr1:86889803..86889833,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.15e-17!43;CL:0000066!5.18e-12!254;CL:0002159!9.96e-12!13;CL:0002251!4.47e-11!21;CL:0000223!8.40e-11!59;CL:0002077!1.69e-09!33;CL:0000076!2.63e-09!62;CL:0002368!3.88e-09!13;CL:0000622!1.17e-07!5;CL:0000197!3.48e-07!6;CL:0000098!3.48e-07!6;CL:0002167!3.48e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.13e-20;42!CL:0002159;2.37e-19;14!CL:0002368;2.46e-16;13!CL:0002251;1.55e-14;20!CL:0000622;1.31e-12;5!CL:0002327;1.65e-10;4!CL:0002077;1.84e-10;34!CL:0000154;2.03e-10;6!CL:0000362;1.94e-09;9!CL:0000244;2.46e-09;4!CL:0000731;2.46e-09;4!CL:0002621;1.02e-08;3!CL:0002166;1.04e-08;3!CL:0002202;1.26e-08;9!CL:0002632;1.26e-08;9!CL:0002623;5.58e-08;3!CL:0000307;9.62e-08;3!CL:0002328;2.90e-07;3!CL:0000240;5.27e-07;6!CL:0000311;5.27e-07;6!CL:0000079;5.27e-07;6!CL:0000237;5.27e-07;6!CL:0000150;9.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.22e-26,42;CL:0002159,2.42e-19,14;CL:0000223,1.32e-18,58;CL:0002368,2.47e-16,13;CL:0000066,5.61e-16,253;CL:0002251,1.53e-14,20;CL:0000622,1.31e-12,5;CL:0002077,3.12e-12,34;CL:0002327,1.63e-10,4;CL:0000154,2.03e-10,6;CL:0000362,1.95e-09,9;CL:0000244,2.81e-09,4;CL:0000731,2.81e-09,4;CL:0002621,1.02e-08,3;CL:0002166,1.04e-08,3;CL:0002202,1.28e-08,9;CL:0002632,1.28e-08,9;CL:0002623,5.58e-08,3;CL:0000068,9.73e-08,3;CL:0000069,9.73e-08,3;CL:0000307,9.73e-08,3;CL:0000377,9.73e-08,3;CL:0000076,2.37e-07,63;CL:0002328,2.93e-07,3;CL:0000240,5.27e-07,6;CL:0000311,5.27e-07,6;CL:0000079,5.27e-07,6;CL:0000237,5.27e-07,6;CL:0000036,5.27e-07,6;CL:0000357,5.27e-07,6;CL:0000114,5.27e-07,6;CL:0002321,8.30e-07,250;CL:0000150,9.10e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;2.41e-10;58!CL:0000377;9.62e-08;3!CL:0000357;5.27e-07;6!CL:0000114;5.27e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!1.01e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.03e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.77e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000165!1.10e-17!28;UBERON:0000930!1.10e-17!28;UBERON:0003102!1.36e-16!95;UBERON:0000166!2.51e-16!21;UBERON:0000161!1.01e-14!35;UBERON:0001004!4.13e-14!72;UBERON:0001444!3.88e-10!48;UBERON:0001828!1.26e-09!8;UBERON:0004119!1.47e-09!169;UBERON:0000925!1.47e-09!169;UBERON:0006595!1.47e-09!169;UBERON:0000065!9.87e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.43e-15;28!UBERON:0000161;2.06e-15;19!UBERON:0000166;2.06e-15;19!UBERON:0003729;2.22e-13;13!UBERON:0000486;2.20e-11;12!UBERON:0001911;1.65e-10;4!UBERON:0001828;3.65e-10;8!UBERON:0000344;5.85e-10;20!UBERON:0001003;5.83e-09;15!UBERON:0007376;5.83e-09;15!UBERON:0001949;1.02e-08;3!UBERON:0000365;1.85e-07;5!UBERON:0004815;2.90e-07;3!UBERON:0002031;2.90e-07;3!UBERON:0010371;5.29e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.88e-18,99;UBERON:0000166,6.89e-18,22;UBERON:0000165,7.14e-15,29;UBERON:0000930,7.14e-15,29;UBERON:0000161,1.24e-14,36;UBERON:0001004,2.89e-14,74;UBERON:0003729,2.38e-13,13;UBERON:0000033,7.95e-12,56;UBERON:0000153,2.06e-11,62;UBERON:0007811,2.06e-11,62;UBERON:0001911,1.63e-10,4;UBERON:0005333,1.63e-10,4;UBERON:0008425,1.63e-10,4;UBERON:0005311,1.63e-10,4;UBERON:0004119,2.23e-10,160;UBERON:0000925,2.23e-10,160;UBERON:0006595,2.23e-10,160;UBERON:0001828,4.07e-10,8;UBERON:0000344,6.17e-10,20;UBERON:0001444,1.35e-09,49;UBERON:0001003,5.77e-09,15;UBERON:0007376,5.77e-09,15;UBERON:0007383,5.77e-09,15;UBERON:0001949,1.02e-08,3;UBERON:0000365,2.06e-07,5;UBERON:0004815,2.93e-07,3;UBERON:0002031,2.93e-07,3 | |||
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|short_description=p2@CLCA2 | |||
}} |
Revision as of 07:00, 12 September 2013
Short description: | p2@CLCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CLCA2_5end |
Coexpression cluster: | C2603_breast_Mallassezderived_Gingival_Sebocyte_Keratinocyte_keratoacanthoma_Prostate |
Association with transcript: | 34bp_to_ENST00000370565, ENST00000439777, NM_006536, uc001dlr.3_5end |
EntrezGene: | CLCA2 |
HGNC: | 2016 |
UniProt: | Q9UQC9E7EUD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 2.88e-18 | 99 |
oral opening | 6.89e-18 | 22 |
mouth | 7.14e-15 | 29 |
stomodeum | 7.14e-15 | 29 |
orifice | 1.24e-14 | 36 |
respiratory system | 2.89e-14 | 74 |
mouth mucosa | 2.38e-13 | 13 |
head | 7.95e-12 | 56 |
anterior region of body | 2.06e-11 | 62 |
craniocervical region | 2.06e-11 | 62 |
mammary gland | 1.63e-10 | 4 |
mammary bud | 1.63e-10 | 4 |
mammary ridge | 1.63e-10 | 4 |
mammary placode | 1.63e-10 | 4 |
endoderm-derived structure | 2.23e-10 | 160 |
endoderm | 2.23e-10 | 160 |
presumptive endoderm | 2.23e-10 | 160 |
gingiva | 4.07e-10 | 8 |
mucosa | 6.17e-10 | 20 |
subdivision of head | 1.35e-09 | 49 |
skin epidermis | 5.77e-09 | 15 |
outer epithelium | 5.77e-09 | 15 |
enveloping layer of ectoderm | 5.77e-09 | 15 |
gingival epithelium | 1.02e-08 | 3 |
urothelium | 2.06e-07 | 5 |
lower respiratory tract epithelium | 2.93e-07 | 3 |
epithelium of bronchus | 2.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.77e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.