FFCP PHASE1:Hg19::chr1:89732686..89732696,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115362|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19895|TSSclassifier=N|UniProt=|association_with_transcript=-424bp_to_ENST00000481145_5end|coexpression_cluster_id=C7|description=CAGE_peak_11_at_GBP5_5end|id=chr1:89732686..89732696,-|ontology_enrichment_celltype=CL:0002057!1.20e-32!42;CL:0000860!3.51e-30!45;CL:0000738!4.68e-27!140;CL:0002087!2.45e-26!119;CL:0000037!5.69e-24!172;CL:0000566!5.69e-24!172;CL:0002032!1.46e-23!165;CL:0000837!1.46e-23!165;CL:0002031!4.35e-23!124;CL:0000766!2.79e-22!76;CL:0000988!2.96e-22!182;CL:0002194!6.04e-20!63;CL:0000576!6.04e-20!63;CL:0000040!6.04e-20!63;CL:0000559!6.04e-20!63;CL:0002009!3.27e-19!65;CL:0000839!1.47e-17!70;CL:0000557!2.95e-17!71;CL:0000763!1.00e-16!112;CL:0000049!1.00e-16!112;CL:0000791!9.55e-12!18;CL:0000789!9.55e-12!18;CL:0002420!9.55e-12!18;CL:0002419!9.55e-12!18;CL:0000790!9.55e-12!18;CL:0000084!1.38e-10!25;CL:0000827!1.38e-10!25;CL:0000893!2.54e-10!2;CL:0002489!2.54e-10!2;CL:0000809!2.54e-10!2;CL:0000808!2.54e-10!2;CL:0000894!2.54e-10!2;CL:0000806!2.54e-10!2;CL:0000807!2.54e-10!2;CL:0000805!2.54e-10!2;CL:0002425!2.54e-10!2;CL:0000134!3.10e-09!358;CL:0002320!6.54e-09!365;CL:0000219!9.05e-08!390;CL:0000624!1.11e-07!6;CL:0000898!3.04e-07!3;CL:0000767!4.82e-07!3;CL:0000838!5.88e-07!52;CL:0000623!6.72e-07!3;CL:0000825!6.72e-07!3;CL:0000542!8.59e-07!53;CL:0000051!8.59e-07!53|ontology_enrichment_celltype_v019=CL:0000860;1.91e-48;33!CL:0002057;1.91e-48;33!CL:0000473;3.99e-36;39!CL:0000234;3.99e-36;39!CL:0000576;5.88e-27;48!CL:0000766;3.07e-14;69!CL:0000763;1.01e-10;100!CL:0000775;3.25e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,3.44e-42,42;CL:0002057,3.44e-42,42;CL:0000473,7.20e-37,48;CL:0000234,7.20e-37,48;CL:0002194,2.07e-29,59;CL:0000576,2.07e-29,59;CL:0000040,2.07e-29,59;CL:0000559,2.07e-29,59;CL:0000766,3.58e-29,72;CL:0002009,1.90e-28,61;CL:0000839,2.73e-26,66;CL:0000557,6.77e-26,67;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000738,2.78e-15,136;CL:0002087,5.96e-15,115;CL:0002031,2.62e-14,120;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0000775,3.16e-07,3|ontology_enrichment_development_v019=CL:0002057;7.01e-33;42!CL:0000049;6.66e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.33e-15!102;UBERON:0003061!2.33e-15!102;UBERON:0002371!7.16e-15!80;UBERON:0002193!1.44e-13!112;UBERON:0001474!1.47e-13!86;UBERON:0002405!4.62e-13!115;UBERON:0004765!5.86e-11!101;UBERON:0001434!5.86e-11!101;UBERON:0002384!1.81e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.22e-23,76;UBERON:0001474,4.00e-21,82;UBERON:0004765,3.21e-19,90;UBERON:0002405,1.37e-18,93;UBERON:0002390,1.27e-17,98;UBERON:0003061,1.27e-17,98;UBERON:0001434,2.92e-17,100;UBERON:0002193,5.97e-16,108;UBERON:0002204,4.09e-10,167;UBERON:0003081,3.40e-08,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,5.17846306179871,2.0492856522328,2.83778675866302,0,0,1.35426486594342,0.188242339542605,0,0,0.306083892370903,0,0,2.96866170168044,4.18873681005427,2.98357325372886,0.580418477257168,0,0,6.53246529667532,2.60741459210101,2.82345498116652,0,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.215627574859517,0,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115362 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19895 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-424bp_to_ENST00000481145_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_11_at_GBP5_5end | |||
|id=chr1:89732686..89732696,- | |||
|ontology_enrichment_celltype=CL:0002057!1.20e-32!42;CL:0000860!3.51e-30!45;CL:0000738!4.68e-27!140;CL:0002087!2.45e-26!119;CL:0000037!5.69e-24!172;CL:0000566!5.69e-24!172;CL:0002032!1.46e-23!165;CL:0000837!1.46e-23!165;CL:0002031!4.35e-23!124;CL:0000766!2.79e-22!76;CL:0000988!2.96e-22!182;CL:0002194!6.04e-20!63;CL:0000576!6.04e-20!63;CL:0000040!6.04e-20!63;CL:0000559!6.04e-20!63;CL:0002009!3.27e-19!65;CL:0000839!1.47e-17!70;CL:0000557!2.95e-17!71;CL:0000763!1.00e-16!112;CL:0000049!1.00e-16!112;CL:0000791!9.55e-12!18;CL:0000789!9.55e-12!18;CL:0002420!9.55e-12!18;CL:0002419!9.55e-12!18;CL:0000790!9.55e-12!18;CL:0000084!1.38e-10!25;CL:0000827!1.38e-10!25;CL:0000893!2.54e-10!2;CL:0002489!2.54e-10!2;CL:0000809!2.54e-10!2;CL:0000808!2.54e-10!2;CL:0000894!2.54e-10!2;CL:0000806!2.54e-10!2;CL:0000807!2.54e-10!2;CL:0000805!2.54e-10!2;CL:0002425!2.54e-10!2;CL:0000134!3.10e-09!358;CL:0002320!6.54e-09!365;CL:0000219!9.05e-08!390;CL:0000624!1.11e-07!6;CL:0000898!3.04e-07!3;CL:0000767!4.82e-07!3;CL:0000838!5.88e-07!52;CL:0000623!6.72e-07!3;CL:0000825!6.72e-07!3;CL:0000542!8.59e-07!53;CL:0000051!8.59e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.91e-48;33!CL:0002057;1.91e-48;33!CL:0000473;3.99e-36;39!CL:0000234;3.99e-36;39!CL:0000576;5.88e-27;48!CL:0000766;3.07e-14;69!CL:0000763;1.01e-10;100!CL:0000775;3.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.44e-42,42;CL:0002057,3.44e-42,42;CL:0000473,7.20e-37,48;CL:0000234,7.20e-37,48;CL:0002194,2.07e-29,59;CL:0000576,2.07e-29,59;CL:0000040,2.07e-29,59;CL:0000559,2.07e-29,59;CL:0000766,3.58e-29,72;CL:0002009,1.90e-28,61;CL:0000839,2.73e-26,66;CL:0000557,6.77e-26,67;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000738,2.78e-15,136;CL:0002087,5.96e-15,115;CL:0002031,2.62e-14,120;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0000775,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.01e-33;42!CL:0000049;6.66e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.33e-15!102;UBERON:0003061!2.33e-15!102;UBERON:0002371!7.16e-15!80;UBERON:0002193!1.44e-13!112;UBERON:0001474!1.47e-13!86;UBERON:0002405!4.62e-13!115;UBERON:0004765!5.86e-11!101;UBERON:0001434!5.86e-11!101;UBERON:0002384!1.81e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.22e-23,76;UBERON:0001474,4.00e-21,82;UBERON:0004765,3.21e-19,90;UBERON:0002405,1.37e-18,93;UBERON:0002390,1.27e-17,98;UBERON:0003061,1.27e-17,98;UBERON:0001434,2.92e-17,100;UBERON:0002193,5.97e-16,108;UBERON:0002204,4.09e-10,167;UBERON:0003081,3.40e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,5.17846306179871,2.0492856522328,2.83778675866302,0,0,1.35426486594342,0.188242339542605,0,0,0.306083892370903,0,0,2.96866170168044,4.18873681005427,2.98357325372886,0.580418477257168,0,0,6.53246529667532,2.60741459210101,2.82345498116652,0,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.215627574859517,0,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p11@GBP5 | |||
}} |
Revision as of 07:06, 12 September 2013
Short description: | p11@GBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_GBP5_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -424bp_to_ENST00000481145_5end |
EntrezGene: | GBP5 |
HGNC: | 19895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.44e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.44e-42 | 42 |
defensive cell | 7.20e-37 | 48 |
phagocyte | 7.20e-37 | 48 |
monopoietic cell | 2.07e-29 | 59 |
monocyte | 2.07e-29 | 59 |
monoblast | 2.07e-29 | 59 |
promonocyte | 2.07e-29 | 59 |
myeloid leukocyte | 3.58e-29 | 72 |
macrophage dendritic cell progenitor | 1.90e-28 | 61 |
myeloid lineage restricted progenitor cell | 2.73e-26 | 66 |
granulocyte monocyte progenitor cell | 6.77e-26 | 67 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
leukocyte | 2.78e-15 | 136 |
nongranular leukocyte | 5.96e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.62e-14 | 120 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
neutrophil | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.22e-23 | 76 |
bone element | 4.00e-21 | 82 |
skeletal element | 3.21e-19 | 90 |
immune system | 1.37e-18 | 93 |
hematopoietic system | 1.27e-17 | 98 |
blood island | 1.27e-17 | 98 |
skeletal system | 2.92e-17 | 100 |
hemolymphoid system | 5.97e-16 | 108 |
musculoskeletal system | 4.09e-10 | 167 |
lateral plate mesoderm | 3.40e-08 | 203 |
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