FFCP PHASE1:Hg19::chr1:9262713..9262723,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-35bp_to_ENST00000437157_5end|coexpression_cluster_id=C4008|description=CAGE_peak_2_at_ENST00000437157_5end|id=chr1:9262713..9262723,-|ontology_enrichment_celltype=CL:0002582!7.09e-12!3;CL:0002583!1.19e-08!2;CL:0002334!1.36e-07!12;CL:0002570!3.14e-07!8;CL:1000487!3.29e-07!2|ontology_enrichment_celltype_v019=CL:0002583;9.30e-28;2!CL:0002582;9.08e-19;3!CL:0002334;3.99e-18;12!CL:0000048;3.42e-08;58!CL:0002262;7.52e-08;2!CL:1000398;7.52e-08;2!CL:0000134;1.10e-07;55!CL:0002570;1.82e-07;8!CL:0000723;2.84e-07;61!CL:0000034;9.37e-07;69|ontology_enrichment_celltype_v019_2=CL:0002583,7.10e-28,2;CL:0002582,7.94e-19,3;CL:0002334,3.42e-18,12;CL:0002262,6.15e-08,2;CL:1000398,6.15e-08,2;CL:0002570,1.94e-07,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!1.32e-15!14;DOID:120!2.17e-07!27;DOID:193!8.74e-07!29|ontology_enrichment_disease_v019=DOID:2394;7.42e-24;14!DOID:120;2.19e-12;27!DOID:193;1.57e-11;29|ontology_enrichment_disease_v019_2=DOID:2394,9.86e-24,14;DOID:120,2.53e-12,27;DOID:193,1.80e-11,29|ontology_enrichment_uberon=UBERON:0000992!5.92e-13!13;UBERON:0002118!6.12e-12!5;UBERON:0004532!6.12e-12!5;UBERON:0001950!7.53e-11!20;UBERON:0002020!1.25e-10!34;UBERON:0003528!1.25e-10!34;UBERON:0002619!9.08e-10!22;UBERON:0001869!1.77e-09!32;UBERON:0002791!3.89e-09!33;UBERON:0002119!5.63e-09!4;UBERON:0004531!5.63e-09!4;UBERON:0001893!8.15e-09!34;UBERON:0000956!1.84e-08!25;UBERON:0000203!1.84e-08!25;UBERON:0000991!1.35e-07!21;UBERON:0009196!1.35e-07!21;UBERON:0009117!1.35e-07!21;UBERON:0005564!1.35e-07!21;UBERON:0004176!3.35e-07!22;UBERON:0002780!5.33e-07!41;UBERON:0001890!5.33e-07!41;UBERON:0006240!5.33e-07!41;UBERON:0003080!8.64e-07!42|ontology_enrichment_uberon_v019=UBERON:0000992;9.30e-17;13!UBERON:0002119;2.50e-14;4!UBERON:0002072;1.03e-11;5!UBERON:0002118;1.03e-11;5!UBERON:0000991;1.76e-10;21!UBERON:0001281;7.52e-08;2!UBERON:0003497;7.52e-08;2!UBERON:0003909;7.52e-08;2!UBERON:0003835;7.52e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.07e-16,13;UBERON:0002119,2.76e-14,4;UBERON:0002072,9.26e-12,5;UBERON:0002118,1.15e-11,5;UBERON:0000991,1.91e-10,21;UBERON:0009196,1.91e-10,21;UBERON:0009117,1.91e-10,21;UBERON:0005564,1.91e-10,21;UBERON:0004176,5.57e-10,22;UBERON:0001281,6.15e-08,2;UBERON:0003497,6.15e-08,2;UBERON:0003909,6.15e-08,2;UBERON:0003835,6.15e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,1.3321108950805,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46735510084249,2.48586415438378,1.23190734020714,4.15403543346897,0.813472649219715,0,0,0,0,0.910455840033585,0,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.689182862422653,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72620834856675,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,1.19403842309499,0.233713309847224,1.10961172300523,0,0,0,0,0.453692771289717,0.15543720058278,0,1.11507737014592,0,4.03683687878274,0.829412415681711,2.12673371646396,0,0,0,0.406870733204662,2.36403256963327,0.429642228169954,0,2.3885753321917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.484100767249525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@ENST00000437157}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_ENST00000437157_5end | |||
|coexpression_cluster_id=C4008 | |||
|description=CAGE_peak_2_at_ENST00000437157_5end | |||
|id=chr1:9262713..9262723,- | |||
|ontology_enrichment_celltype=CL:0002582!7.09e-12!3;CL:0002583!1.19e-08!2;CL:0002334!1.36e-07!12;CL:0002570!3.14e-07!8;CL:1000487!3.29e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002583;9.30e-28;2!CL:0002582;9.08e-19;3!CL:0002334;3.99e-18;12!CL:0000048;3.42e-08;58!CL:0002262;7.52e-08;2!CL:1000398;7.52e-08;2!CL:0000134;1.10e-07;55!CL:0002570;1.82e-07;8!CL:0000723;2.84e-07;61!CL:0000034;9.37e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002583,7.10e-28,2;CL:0002582,7.94e-19,3;CL:0002334,3.42e-18,12;CL:0002262,6.15e-08,2;CL:1000398,6.15e-08,2;CL:0002570,1.94e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.32e-15!14;DOID:120!2.17e-07!27;DOID:193!8.74e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.42e-24;14!DOID:120;2.19e-12;27!DOID:193;1.57e-11;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.86e-24,14;DOID:120,2.53e-12,27;DOID:193,1.80e-11,29 | |||
|ontology_enrichment_uberon=UBERON:0000992!5.92e-13!13;UBERON:0002118!6.12e-12!5;UBERON:0004532!6.12e-12!5;UBERON:0001950!7.53e-11!20;UBERON:0002020!1.25e-10!34;UBERON:0003528!1.25e-10!34;UBERON:0002619!9.08e-10!22;UBERON:0001869!1.77e-09!32;UBERON:0002791!3.89e-09!33;UBERON:0002119!5.63e-09!4;UBERON:0004531!5.63e-09!4;UBERON:0001893!8.15e-09!34;UBERON:0000956!1.84e-08!25;UBERON:0000203!1.84e-08!25;UBERON:0000991!1.35e-07!21;UBERON:0009196!1.35e-07!21;UBERON:0009117!1.35e-07!21;UBERON:0005564!1.35e-07!21;UBERON:0004176!3.35e-07!22;UBERON:0002780!5.33e-07!41;UBERON:0001890!5.33e-07!41;UBERON:0006240!5.33e-07!41;UBERON:0003080!8.64e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;9.30e-17;13!UBERON:0002119;2.50e-14;4!UBERON:0002072;1.03e-11;5!UBERON:0002118;1.03e-11;5!UBERON:0000991;1.76e-10;21!UBERON:0001281;7.52e-08;2!UBERON:0003497;7.52e-08;2!UBERON:0003909;7.52e-08;2!UBERON:0003835;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.07e-16,13;UBERON:0002119,2.76e-14,4;UBERON:0002072,9.26e-12,5;UBERON:0002118,1.15e-11,5;UBERON:0000991,1.91e-10,21;UBERON:0009196,1.91e-10,21;UBERON:0009117,1.91e-10,21;UBERON:0005564,1.91e-10,21;UBERON:0004176,5.57e-10,22;UBERON:0001281,6.15e-08,2;UBERON:0003497,6.15e-08,2;UBERON:0003909,6.15e-08,2;UBERON:0003835,6.15e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,1.3321108950805,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46735510084249,2.48586415438378,1.23190734020714,4.15403543346897,0.813472649219715,0,0,0,0,0.910455840033585,0,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.689182862422653,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72620834856675,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,1.19403842309499,0.233713309847224,1.10961172300523,0,0,0,0,0.453692771289717,0.15543720058278,0,1.11507737014592,0,4.03683687878274,0.829412415681711,2.12673371646396,0,0,0,0.406870733204662,2.36403256963327,0.429642228169954,0,2.3885753321917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.484100767249525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000437157 | |||
}} |
Revision as of 07:12, 12 September 2013
Short description: | p2@ENST00000437157 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000437157_5end |
Coexpression cluster: | C4008_mesenchymal_Preadipocyte_liposarcoma_Mesenchymal_pons_Myoblast_Skeletal |
Association with transcript: | -35bp_to_ENST00000437157_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous preadipocyte | 7.10e-28 | 2 |
visceral preadipocyte | 7.94e-19 | 3 |
preadipocyte | 3.42e-18 | 12 |
endothelial cell of sinusoid | 6.15e-08 | 2 |
endothelial cell of hepatic sinusoid | 6.15e-08 | 2 |
mesenchymal stem cell of adipose | 1.94e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.07e-16 | 13 |
left ovary | 2.76e-14 | 4 |
hypodermis | 9.26e-12 | 5 |
right ovary | 1.15e-11 | 5 |
gonad | 1.91e-10 | 21 |
indifferent external genitalia | 1.91e-10 | 21 |
indifferent gonad | 1.91e-10 | 21 |
gonad primordium | 1.91e-10 | 21 |
external genitalia | 5.57e-10 | 22 |
hepatic sinusoid | 6.15e-08 | 2 |
abdomen blood vessel | 6.15e-08 | 2 |
sinusoid | 6.15e-08 | 2 |
abdominal segment blood vessel | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.86e-24 | 14 |
female reproductive organ cancer | 2.53e-12 | 27 |
reproductive organ cancer | 1.80e-11 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.