FFCP PHASE1:Hg19::chr22:22890694..22890704,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23532|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=9336|TSSclassifier=W|UniProt=P78395|association_with_transcript=-30bp_to_AF025440_5end|coexpression_cluster_id=C206|description=CAGE_peak_8_at_PRAME_5end|id=chr22:22890694..22890704,-|ontology_enrichment_celltype=CL:0000159!1.61e-13!2;CL:0000319!9.71e-08!1;CL:0000313!1.83e-07!1|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;9.18e-26;2|ontology_enrichment_disease=DOID:1909!4.55e-14!2;DOID:14566!3.67e-13!239;DOID:0050687!7.60e-13!143;DOID:162!2.55e-12!235;DOID:3030!9.71e-08!1;DOID:3371!1.18e-07!1;DOID:4549!1.18e-07!1;DOID:5861!1.18e-07!1;DOID:6496!1.18e-07!1;DOID:1115!1.69e-07!20;DOID:1036!1.73e-07!8;DOID:2152!1.83e-07!1|ontology_enrichment_disease_v019=DOID:1909;7.30e-99;2|ontology_enrichment_disease_v019_2=DOID:1909,9.38e-99,2|ontology_enrichment_uberon=UBERON:0001301!8.00e-08!1;UBERON:0004911!1.83e-07!1;UBERON:0000997!4.34e-07!1;UBERON:0005056!4.34e-07!1|ontology_enrichment_uberon_v019=UBERON:0001301;6.58e-50;1!UBERON:0003135;5.89e-19;11!UBERON:0006947;1.12e-17;3!UBERON:0004054;1.12e-17;3!UBERON:0001003;2.66e-14;15!UBERON:0007376;2.66e-14;15!UBERON:0005904;1.29e-13;4!UBERON:0003101;4.85e-10;22!UBERON:0000079;4.85e-10;22!UBERON:0010371;1.11e-07;31!UBERON:0000473;1.64e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.58e-50,1;UBERON:0003135,5.63e-19,11;UBERON:0006947,1.12e-17,3;UBERON:0004054,1.12e-17,3;UBERON:0001003,2.75e-14,15;UBERON:0007376,2.75e-14,15;UBERON:0007383,2.75e-14,15;UBERON:0005904,1.29e-13,4;UBERON:0003101,4.74e-10,22;UBERON:0000079,4.74e-10,22;UBERON:0000473,1.59e-07,8;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987334088507493,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.0979923974143777,0,1.04836000945218,0,0,0,0.0821154570532092,0,0.353024506766001,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830091809617385,0,2.12308764558307,6.28023733798928,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8795905322931,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0|short_description=p8@PRAME}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23532 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9336 | |||
|TSSclassifier=W | |||
|UniProt=P78395 | |||
|association_with_transcript=-30bp_to_AF025440_5end | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_8_at_PRAME_5end | |||
|id=chr22:22890694..22890704,- | |||
|ontology_enrichment_celltype=CL:0000159!1.61e-13!2;CL:0000319!9.71e-08!1;CL:0000313!1.83e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.18e-26;2 | |||
|ontology_enrichment_disease=DOID:1909!4.55e-14!2;DOID:14566!3.67e-13!239;DOID:0050687!7.60e-13!143;DOID:162!2.55e-12!235;DOID:3030!9.71e-08!1;DOID:3371!1.18e-07!1;DOID:4549!1.18e-07!1;DOID:5861!1.18e-07!1;DOID:6496!1.18e-07!1;DOID:1115!1.69e-07!20;DOID:1036!1.73e-07!8;DOID:2152!1.83e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;7.30e-99;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.38e-99,2 | |||
|ontology_enrichment_uberon=UBERON:0001301!8.00e-08!1;UBERON:0004911!1.83e-07!1;UBERON:0000997!4.34e-07!1;UBERON:0005056!4.34e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;6.58e-50;1!UBERON:0003135;5.89e-19;11!UBERON:0006947;1.12e-17;3!UBERON:0004054;1.12e-17;3!UBERON:0001003;2.66e-14;15!UBERON:0007376;2.66e-14;15!UBERON:0005904;1.29e-13;4!UBERON:0003101;4.85e-10;22!UBERON:0000079;4.85e-10;22!UBERON:0010371;1.11e-07;31!UBERON:0000473;1.64e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.58e-50,1;UBERON:0003135,5.63e-19,11;UBERON:0006947,1.12e-17,3;UBERON:0004054,1.12e-17,3;UBERON:0001003,2.75e-14,15;UBERON:0007376,2.75e-14,15;UBERON:0007383,2.75e-14,15;UBERON:0005904,1.29e-13,4;UBERON:0003101,4.74e-10,22;UBERON:0000079,4.74e-10,22;UBERON:0000473,1.59e-07,8;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987334088507493,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.0979923974143777,0,1.04836000945218,0,0,0,0.0821154570532092,0,0.353024506766001,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830091809617385,0,2.12308764558307,6.28023733798928,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8795905322931,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p8@PRAME | |||
}} |
Revision as of 11:06, 12 September 2013
Short description: | p8@PRAME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PRAME_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -30bp_to_AF025440_5end |
EntrezGene: | PRAME |
HGNC: | 9336 |
UniProt: | P78395 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 6.58e-50 | 1 |
male reproductive organ | 5.63e-19 | 11 |
male genital duct | 1.12e-17 | 3 |
internal male genitalia | 1.12e-17 | 3 |
skin epidermis | 2.75e-14 | 15 |
outer epithelium | 2.75e-14 | 15 |
enveloping layer of ectoderm | 2.75e-14 | 15 |
duct of male reproductive system | 1.29e-13 | 4 |
male organism | 4.74e-10 | 22 |
male reproductive system | 4.74e-10 | 22 |
testis | 1.59e-07 | 8 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.38e-99 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.