FFCP PHASE1:Hg19::chr22:50523908..50523925,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23209|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17082|TSSclassifier=S|UniProt=B7Z659|association_with_transcript=-54bp_to_ENST00000431262_5end|description=CAGE_peak_8_at_MLC1_5end|id=chr22:50523908..50523925,-|ontology_enrichment_celltype=CL:0000037!2.58e-21!172;CL:0000566!2.58e-21!172;CL:0000763!1.60e-20!112;CL:0000049!1.60e-20!112;CL:0002032!5.72e-19!165;CL:0000837!5.72e-19!165;CL:0000988!7.56e-19!182;CL:0002393!3.81e-07!9;CL:0002397!3.81e-07!9|ontology_enrichment_celltype_v019=CL:0000763;4.06e-13;100!CL:0000623;2.78e-10;3!CL:0000767;5.70e-10;3|ontology_enrichment_celltype_v019_2=CL:0000763,1.80e-30,108;CL:0000049,1.80e-30,108;CL:0002032,1.98e-27,161;CL:0000837,1.98e-27,161;CL:0000037,2.04e-27,168;CL:0000988,1.76e-25,177;CL:0000623,3.54e-10,3;CL:0000825,3.54e-10,3;CL:0000767,5.89e-10,3;CL:0000219,2.40e-08,386;CL:0000134,3.10e-08,354;CL:0002320,7.05e-08,361;CL:0000034,3.36e-07,441|ontology_enrichment_development_v019=CL:0000049;4.88e-11;108|ontology_enrichment_disease=DOID:8692!4.27e-29!31;DOID:1240!5.46e-29!39;DOID:2531!4.00e-22!51;DOID:0060083!4.00e-22!51|ontology_enrichment_disease_v019=DOID:8692;8.32e-71;31!DOID:1240;3.43e-53;39!DOID:2531;4.16e-33;51!DOID:0060083;4.16e-33;51|ontology_enrichment_disease_v019_2=DOID:8692,6.53e-74,31;DOID:1240,1.36e-71,39;DOID:2531,8.71e-53,51;DOID:0060083,8.71e-53,51;DOID:0050686,1.33e-15,137;DOID:162,2.64e-07,235;DOID:14566,5.35e-07,239|ontology_enrichment_uberon=UBERON:0001017!3.11e-14!82;UBERON:0001049!4.33e-14!57;UBERON:0005068!4.33e-14!57;UBERON:0006241!4.33e-14!57;UBERON:0007135!4.33e-14!57;UBERON:0005743!1.06e-13!86;UBERON:0002616!4.49e-13!59;UBERON:0000073!7.77e-13!94;UBERON:0001016!7.77e-13!94;UBERON:0000955!3.83e-12!69;UBERON:0006238!3.83e-12!69;UBERON:0007023!1.19e-10!115;UBERON:0002346!1.99e-10!90;UBERON:0002780!1.05e-09!41;UBERON:0001890!1.05e-09!41;UBERON:0006240!1.05e-09!41;UBERON:0001893!1.30e-09!34;UBERON:0002020!1.68e-09!34;UBERON:0003528!1.68e-09!34;UBERON:0003080!2.54e-09!42;UBERON:0002791!4.36e-09!33;UBERON:0001869!1.30e-08!32;UBERON:0003075!2.06e-08!86;UBERON:0007284!2.06e-08!86;UBERON:0002390!6.57e-08!102;UBERON:0003061!6.57e-08!102;UBERON:0004733!8.08e-07!12;UBERON:0002028!8.08e-07!12;UBERON:0007277!8.08e-07!12|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,1.56727360739044,1.14494394852423,0,0.502170558379211,0,0,0,3.54027849164014,1.15148819429164,1.23852898652861,0,0,0,0,0,3.52320527201817,0.553995408531877,1.00272223735071,1.08505435357926,0,0.32389366601898,0,0.145398238779565,1.13362783106643,0,0,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0.633765858935825,0.637812899895131,0.209658645508376,0.22465726229299,0.150176892841506,0.32145117339416,0,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,1.68152568894461,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0.950452044448374,0,0.511946444617674,1.24930726552346,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.985326475791887,2.46535615237033,0,0.144119953416961,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.164682919644,2.1673383622212,2.58753089831421,2.05348858047597,1.01637849688985,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459257792658427,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.54941678891006,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.714695326373367,1.23408681925858,0.648473311192717,0,0,0,0,0,0,0,0,1.75368900001705,2.59453182862662,5.1706449935739,6.77355464716425,2.59697552219644,10.1086984120845,4.33645890163065,6.58055562246698,10.0253790836027,4.74016977844489,4.81764225311099,2.62339619348362,2.12923118845163,4.80907482658071,4.60861146462687,3.35514161838624,3.8375302593739,3.12620952643264,1.67043704337145,2.46174797895425,3.2454681417118,7.66065526394986,4.22961015263549,0,0.146508179271894,0,0.66866030566487,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.9204181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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23209 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17082 | |||
|TSSclassifier=S | |||
|UniProt=B7Z659 | |||
|association_with_transcript=-54bp_to_ENST00000431262_5end | |||
|description=CAGE_peak_8_at_MLC1_5end | |||
|id=chr22:50523908..50523925,- | |||
|ontology_enrichment_celltype=CL:0000037!2.58e-21!172;CL:0000566!2.58e-21!172;CL:0000763!1.60e-20!112;CL:0000049!1.60e-20!112;CL:0002032!5.72e-19!165;CL:0000837!5.72e-19!165;CL:0000988!7.56e-19!182;CL:0002393!3.81e-07!9;CL:0002397!3.81e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000763;4.06e-13;100!CL:0000623;2.78e-10;3!CL:0000767;5.70e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.80e-30,108;CL:0000049,1.80e-30,108;CL:0002032,1.98e-27,161;CL:0000837,1.98e-27,161;CL:0000037,2.04e-27,168;CL:0000988,1.76e-25,177;CL:0000623,3.54e-10,3;CL:0000825,3.54e-10,3;CL:0000767,5.89e-10,3;CL:0000219,2.40e-08,386;CL:0000134,3.10e-08,354;CL:0002320,7.05e-08,361;CL:0000034,3.36e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000049;4.88e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!4.27e-29!31;DOID:1240!5.46e-29!39;DOID:2531!4.00e-22!51;DOID:0060083!4.00e-22!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.32e-71;31!DOID:1240;3.43e-53;39!DOID:2531;4.16e-33;51!DOID:0060083;4.16e-33;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.53e-74,31;DOID:1240,1.36e-71,39;DOID:2531,8.71e-53,51;DOID:0060083,8.71e-53,51;DOID:0050686,1.33e-15,137;DOID:162,2.64e-07,235;DOID:14566,5.35e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.11e-14!82;UBERON:0001049!4.33e-14!57;UBERON:0005068!4.33e-14!57;UBERON:0006241!4.33e-14!57;UBERON:0007135!4.33e-14!57;UBERON:0005743!1.06e-13!86;UBERON:0002616!4.49e-13!59;UBERON:0000073!7.77e-13!94;UBERON:0001016!7.77e-13!94;UBERON:0000955!3.83e-12!69;UBERON:0006238!3.83e-12!69;UBERON:0007023!1.19e-10!115;UBERON:0002346!1.99e-10!90;UBERON:0002780!1.05e-09!41;UBERON:0001890!1.05e-09!41;UBERON:0006240!1.05e-09!41;UBERON:0001893!1.30e-09!34;UBERON:0002020!1.68e-09!34;UBERON:0003528!1.68e-09!34;UBERON:0003080!2.54e-09!42;UBERON:0002791!4.36e-09!33;UBERON:0001869!1.30e-08!32;UBERON:0003075!2.06e-08!86;UBERON:0007284!2.06e-08!86;UBERON:0002390!6.57e-08!102;UBERON:0003061!6.57e-08!102;UBERON:0004733!8.08e-07!12;UBERON:0002028!8.08e-07!12;UBERON:0007277!8.08e-07!12 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-07,371 | |||
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|short_description=p8@MLC1 | |||
}} |
Revision as of 12:31, 12 September 2013
Short description: | p8@MLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_MLC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000431262_5end |
EntrezGene: | MLC1 |
HGNC: | 17082 |
UniProt: | B7Z659 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.80e-30 | 108 |
common myeloid progenitor | 1.80e-30 | 108 |
hematopoietic oligopotent progenitor cell | 1.98e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-27 | 161 |
hematopoietic stem cell | 2.04e-27 | 168 |
hematopoietic cell | 1.76e-25 | 177 |
natural killer cell | 3.54e-10 | 3 |
pro-NK cell | 3.54e-10 | 3 |
basophil | 5.89e-10 | 3 |
motile cell | 2.40e-08 | 386 |
mesenchymal cell | 3.10e-08 | 354 |
connective tissue cell | 7.05e-08 | 361 |
stem cell | 3.36e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.15e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.53e-74 | 31 |
leukemia | 1.36e-71 | 39 |
hematologic cancer | 8.71e-53 | 51 |
immune system cancer | 8.71e-53 | 51 |
organ system cancer | 1.33e-15 | 137 |
cancer | 2.64e-07 | 235 |
disease of cellular proliferation | 5.35e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.