FFCP PHASE1:Hg19::chr2:183867726..183867766,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:183867726..183867766,-|id=chr2:183867726..183867766,-|ontology_enrichment_celltype=CL:0000066!1.17e-08!254|ontology_enrichment_celltype_v019=CL:0002581;7.74e-12;1|ontology_enrichment_celltype_v019_2=CL:0002581,5.05e-12,1|ontology_enrichment_development_v019=UBERON:0010227;7.74e-12;1!UBERON:0010226;7.74e-12;1!UBERON:0005754;7.74e-12;1|ontology_enrichment_disease=DOID:0050687!1.84e-10!143;DOID:305!1.11e-08!106|ontology_enrichment_disease_v019=DOID:3111;7.74e-12;1!DOID:3603;7.74e-12;1!DOID:3571;7.74e-12;1|ontology_enrichment_disease_v019_2=DOID:3571,1.32e-11,1;DOID:3111,1.63e-11,1;DOID:3603,1.63e-11,1|ontology_enrichment_uberon=UBERON:0004111!1.84e-07!241;UBERON:0000468!7.06e-07!659;UBERON:0000477!7.97e-07!286|ontology_enrichment_uberon_v019=UBERON:0004151;6.08e-15;3!UBERON:0002084;7.74e-12;1!UBERON:0002079;7.74e-12;1!UBERON:0003112;7.74e-12;1!UBERON:0000998;7.74e-12;1!UBERON:0002135;7.74e-12;1!UBERON:0006868;7.74e-12;1!UBERON:0011158;7.74e-12;1!UBERON:0002082;7.74e-12;1!UBERON:0003128;7.74e-12;1!UBERON:0001703;7.74e-12;1!UBERON:0002241;7.74e-12;1!UBERON:0003688;6.37e-08;6!UBERON:0002358;6.37e-08;6!UBERON:0003684;6.37e-08;6!UBERON:0001178;6.37e-08;6!UBERON:0002771;8.92e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004151,4.94e-15,3;UBERON:0000998,4.53e-12,1;UBERON:0006868,4.53e-12,1;UBERON:0003112,5.62e-12,1;UBERON:0011158,5.62e-12,1;UBERON:0003128,5.62e-12,1;UBERON:0001703,5.62e-12,1;UBERON:0002241,5.62e-12,1;UBERON:0004761,5.62e-12,1;UBERON:0009617,5.62e-12,1;UBERON:0002079,6.26e-12,1;UBERON:0002084,6.97e-12,1;UBERON:0002082,6.97e-12,1;UBERON:0010226,6.97e-12,1;UBERON:0002135,1.19e-11,1;UBERON:0003688,9.33e-08,6;UBERON:0002358,9.33e-08,6;UBERON:0003684,9.33e-08,6;UBERON:0001178,9.33e-08,6;UBERON:0002771,8.93e-07,2|phase1_expression=0,1.71280419112787,0.281908808191942,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,0.547497700291537,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0.486634870302636,0.0945348171640679,0.443458794925128,0.263504357079378,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0,0,0.81014194788176,0.357198913136319,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0,1.15235184896,0,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.245668634623536,0.309977343527296,0,0.741800787835671,0,0,0,0,0,0,0.30648779579902,0,0.340296549480063,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0.55146986366197,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0.93733833986777,0.16798212819886,0.283550194484773,0.179117045405697,0,0,0,0.088048434013226,0,0.144119953416961,0,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0.36669142910475,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0.699810938274399,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,0.12269149171914,0,0,0.207970861530807,0.892144943985809,0.473107245101804,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.604780586659361,0.248107807818777,0,0.841980283299221,0.384417447767103,0,1.12597744800525,1.48418066444991,0.462629081407967,0,0.0821271560138091,0.519254429183621,0.232420756919918,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0.863663664408557,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0,0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0.201273793591026,0|short_description=p@chr2:183867726..183867766,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:183867726..183867766,- | |||
|id=chr2:183867726..183867766,- | |||
|ontology_enrichment_celltype=CL:0000066!1.17e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002581;7.74e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,5.05e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;7.74e-12;1!UBERON:0010226;7.74e-12;1!UBERON:0005754;7.74e-12;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.84e-10!143;DOID:305!1.11e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3111;7.74e-12;1!DOID:3603;7.74e-12;1!DOID:3571;7.74e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.32e-11,1;DOID:3111,1.63e-11,1;DOID:3603,1.63e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004111!1.84e-07!241;UBERON:0000468!7.06e-07!659;UBERON:0000477!7.97e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.08e-15;3!UBERON:0002084;7.74e-12;1!UBERON:0002079;7.74e-12;1!UBERON:0003112;7.74e-12;1!UBERON:0000998;7.74e-12;1!UBERON:0002135;7.74e-12;1!UBERON:0006868;7.74e-12;1!UBERON:0011158;7.74e-12;1!UBERON:0002082;7.74e-12;1!UBERON:0003128;7.74e-12;1!UBERON:0001703;7.74e-12;1!UBERON:0002241;7.74e-12;1!UBERON:0003688;6.37e-08;6!UBERON:0002358;6.37e-08;6!UBERON:0003684;6.37e-08;6!UBERON:0001178;6.37e-08;6!UBERON:0002771;8.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,4.94e-15,3;UBERON:0000998,4.53e-12,1;UBERON:0006868,4.53e-12,1;UBERON:0003112,5.62e-12,1;UBERON:0011158,5.62e-12,1;UBERON:0003128,5.62e-12,1;UBERON:0001703,5.62e-12,1;UBERON:0002241,5.62e-12,1;UBERON:0004761,5.62e-12,1;UBERON:0009617,5.62e-12,1;UBERON:0002079,6.26e-12,1;UBERON:0002084,6.97e-12,1;UBERON:0002082,6.97e-12,1;UBERON:0010226,6.97e-12,1;UBERON:0002135,1.19e-11,1;UBERON:0003688,9.33e-08,6;UBERON:0002358,9.33e-08,6;UBERON:0003684,9.33e-08,6;UBERON:0001178,9.33e-08,6;UBERON:0002771,8.93e-07,2 | |||
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| |||
|short_description=p@chr2:183867726..183867766,- | |||
}} |
Revision as of 15:32, 12 September 2013
Short description: | p@chr2:183867726..183867766, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:183867726..183867766, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 5.05e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 4.94e-15 | 3 |
seminal vesicle | 4.53e-12 | 1 |
seminal fluid secreting gland | 4.53e-12 | 1 |
olfactory region | 5.62e-12 | 1 |
primary subdivision of skull | 5.62e-12 | 1 |
cranium | 5.62e-12 | 1 |
neurocranium | 5.62e-12 | 1 |
chondrocranium | 5.62e-12 | 1 |
cartilaginous neurocranium | 5.62e-12 | 1 |
head paraxial mesoderm | 5.62e-12 | 1 |
left cardiac atrium | 6.26e-12 | 1 |
heart left ventricle | 6.97e-12 | 1 |
cardiac ventricle | 6.97e-12 | 1 |
future cardiac ventricle | 6.97e-12 | 1 |
mitral valve | 1.19e-11 | 1 |
omentum | 9.33e-08 | 6 |
peritoneum | 9.33e-08 | 6 |
abdominal cavity | 9.33e-08 | 6 |
visceral peritoneum | 9.33e-08 | 6 |
middle temporal gyrus | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.32e-11 | 1 |
cystadenocarcinoma | 1.63e-11 | 1 |
mucinous cystadenocarcinoma | 1.63e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.