FFCP PHASE1:Mm9::chr10:129805130..129805134,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:129805130..129805134,+|id=chr10:129805130..129805134,+|ontology_enrichment_celltype=CL:0000084!2.07e-10!11;CL:0000827!2.07e-10!11;CL:0000624!3.35e-10!8;CL:0002031!1.57e-09!25;CL:0000838!1.71e-09!12;CL:0000893!4.42e-09!6;CL:0002489!4.42e-09!6;CL:0000898!4.42e-09!6;CL:0000809!4.42e-09!6;CL:0000810!4.42e-09!6;CL:0000895!4.42e-09!6;CL:0000808!4.42e-09!6;CL:0000894!4.42e-09!6;CL:0000806!4.42e-09!6;CL:0000807!4.42e-09!6;CL:0000805!4.42e-09!6;CL:0002425!4.42e-09!6;CL:0002436!4.42e-09!6;CL:0002427!4.42e-09!6;CL:0002428!4.42e-09!6;CL:0002429!4.42e-09!6;CL:0002433!4.42e-09!6;CL:0002431!4.42e-09!6;CL:0002432!4.42e-09!6;CL:0000791!4.85e-09!9;CL:0000789!4.85e-09!9;CL:0002420!4.85e-09!9;CL:0002419!4.85e-09!9;CL:0000790!4.85e-09!9;CL:0000542!1.02e-08!13;CL:0000051!1.02e-08!13;CL:0000988!3.99e-07!32;CL:0002032!3.99e-07!32;CL:0000037!3.99e-07!32;CL:0000566!3.99e-07!32;CL:0000837!3.99e-07!32|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!8.32e-31!23;UBERON:0000974!8.32e-31!23;UBERON:0004807!8.32e-31!23;UBERON:0005058!8.32e-31!23;UBERON:0003351!8.32e-31!23;UBERON:0009113!8.32e-31!23;UBERON:0003295!8.32e-31!23;UBERON:0009722!8.32e-31!23;UBERON:0005562!8.32e-31!23;UBERON:0007690!8.32e-31!23;UBERON:0006562!2.13e-29!24;UBERON:0003408!2.13e-29!24;UBERON:0001557!2.13e-29!24;UBERON:0001042!2.13e-29!24;UBERON:0008814!2.13e-29!24;UBERON:0009145!2.13e-29!24;UBERON:0004177!3.79e-27!29;UBERON:0000072!8.45e-26!27;UBERON:0002193!8.48e-25!48;UBERON:0002390!5.79e-24!45;UBERON:0003061!5.79e-24!45;UBERON:0000063!3.25e-19!35;UBERON:0002405!1.47e-17!70;UBERON:0005057!5.73e-16!51;UBERON:0000065!5.84e-16!41;UBERON:0001004!1.65e-15!42;UBERON:0003081!4.24e-13!88;UBERON:0003929!9.13e-13!55;UBERON:0002368!1.96e-11!60;UBERON:0002530!2.63e-10!65;UBERON:0000490!4.21e-10!66;UBERON:0005911!1.60e-09!69;UBERON:0000949!5.41e-09!72;UBERON:0001041!2.46e-07!92;UBERON:0000077!8.77e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.04e-16,23;UBERON:0000974,6.04e-16,23;UBERON:0004807,6.04e-16,23;UBERON:0005058,6.04e-16,23;UBERON:0003351,6.04e-16,23;UBERON:0009113,6.04e-16,23;UBERON:0003295,6.04e-16,23;UBERON:0009722,6.04e-16,23;UBERON:0005562,6.04e-16,23;UBERON:0007690,6.04e-16,23;UBERON:0006562,2.55e-15,24;UBERON:0003408,2.55e-15,24;UBERON:0001557,2.55e-15,24;UBERON:0001042,2.55e-15,24;UBERON:0008814,2.55e-15,24;UBERON:0009145,2.55e-15,24;UBERON:0000072,1.02e-13,27;UBERON:0004177,7.80e-13,29;UBERON:0005057,7.80e-13,29;UBERON:0000077,8.81e-11,35;UBERON:0007811,1.67e-10,36;UBERON:0000065,2.53e-09,41;UBERON:0001004,4.04e-09,42;UBERON:0000153,6.31e-09,43;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0003929,3.83e-07,55|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0.34243593645101,0.159544317990673,0.684802919724823,0.34968160967599,0,0.404950534779652,0,0.630924330716475,0,0.42438965179803,0,0.397163804803541,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.961563596159751,1.18151621739662,0.100966449948148,0.762068066549998,1.00826185136841,0.487289403698762,1.15454209968395,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:129805130..129805134,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:129805130..129805134,+ | |||
|id=chr10:129805130..129805134,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.07e-10!11;CL:0000827!2.07e-10!11;CL:0000624!3.35e-10!8;CL:0002031!1.57e-09!25;CL:0000838!1.71e-09!12;CL:0000893!4.42e-09!6;CL:0002489!4.42e-09!6;CL:0000898!4.42e-09!6;CL:0000809!4.42e-09!6;CL:0000810!4.42e-09!6;CL:0000895!4.42e-09!6;CL:0000808!4.42e-09!6;CL:0000894!4.42e-09!6;CL:0000806!4.42e-09!6;CL:0000807!4.42e-09!6;CL:0000805!4.42e-09!6;CL:0002425!4.42e-09!6;CL:0002436!4.42e-09!6;CL:0002427!4.42e-09!6;CL:0002428!4.42e-09!6;CL:0002429!4.42e-09!6;CL:0002433!4.42e-09!6;CL:0002431!4.42e-09!6;CL:0002432!4.42e-09!6;CL:0000791!4.85e-09!9;CL:0000789!4.85e-09!9;CL:0002420!4.85e-09!9;CL:0002419!4.85e-09!9;CL:0000790!4.85e-09!9;CL:0000542!1.02e-08!13;CL:0000051!1.02e-08!13;CL:0000988!3.99e-07!32;CL:0002032!3.99e-07!32;CL:0000037!3.99e-07!32;CL:0000566!3.99e-07!32;CL:0000837!3.99e-07!32 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.32e-31!23;UBERON:0000974!8.32e-31!23;UBERON:0004807!8.32e-31!23;UBERON:0005058!8.32e-31!23;UBERON:0003351!8.32e-31!23;UBERON:0009113!8.32e-31!23;UBERON:0003295!8.32e-31!23;UBERON:0009722!8.32e-31!23;UBERON:0005562!8.32e-31!23;UBERON:0007690!8.32e-31!23;UBERON:0006562!2.13e-29!24;UBERON:0003408!2.13e-29!24;UBERON:0001557!2.13e-29!24;UBERON:0001042!2.13e-29!24;UBERON:0008814!2.13e-29!24;UBERON:0009145!2.13e-29!24;UBERON:0004177!3.79e-27!29;UBERON:0000072!8.45e-26!27;UBERON:0002193!8.48e-25!48;UBERON:0002390!5.79e-24!45;UBERON:0003061!5.79e-24!45;UBERON:0000063!3.25e-19!35;UBERON:0002405!1.47e-17!70;UBERON:0005057!5.73e-16!51;UBERON:0000065!5.84e-16!41;UBERON:0001004!1.65e-15!42;UBERON:0003081!4.24e-13!88;UBERON:0003929!9.13e-13!55;UBERON:0002368!1.96e-11!60;UBERON:0002530!2.63e-10!65;UBERON:0000490!4.21e-10!66;UBERON:0005911!1.60e-09!69;UBERON:0000949!5.41e-09!72;UBERON:0001041!2.46e-07!92;UBERON:0000077!8.77e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.04e-16,23;UBERON:0000974,6.04e-16,23;UBERON:0004807,6.04e-16,23;UBERON:0005058,6.04e-16,23;UBERON:0003351,6.04e-16,23;UBERON:0009113,6.04e-16,23;UBERON:0003295,6.04e-16,23;UBERON:0009722,6.04e-16,23;UBERON:0005562,6.04e-16,23;UBERON:0007690,6.04e-16,23;UBERON:0006562,2.55e-15,24;UBERON:0003408,2.55e-15,24;UBERON:0001557,2.55e-15,24;UBERON:0001042,2.55e-15,24;UBERON:0008814,2.55e-15,24;UBERON:0009145,2.55e-15,24;UBERON:0000072,1.02e-13,27;UBERON:0004177,7.80e-13,29;UBERON:0005057,7.80e-13,29;UBERON:0000077,8.81e-11,35;UBERON:0007811,1.67e-10,36;UBERON:0000065,2.53e-09,41;UBERON:0001004,4.04e-09,42;UBERON:0000153,6.31e-09,43;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0.34243593645101,0.159544317990673,0.684802919724823,0.34968160967599,0,0.404950534779652,0,0.630924330716475,0,0.42438965179803,0,0.397163804803541,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.961563596159751,1.18151621739662,0.100966449948148,0.762068066549998,1.00826185136841,0.487289403698762,1.15454209968395,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:129805130..129805134,+ | |||
}} |
Revision as of 16:14, 12 September 2013
Short description: | p@chr10:129805130..129805134, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:129805130..129805134, + |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 6.04e-16 | 23 |
neck | 6.04e-16 | 23 |
respiratory system epithelium | 6.04e-16 | 23 |
hemolymphoid system gland | 6.04e-16 | 23 |
pharyngeal epithelium | 6.04e-16 | 23 |
thymic region | 6.04e-16 | 23 |
pharyngeal gland | 6.04e-16 | 23 |
entire pharyngeal arch endoderm | 6.04e-16 | 23 |
thymus primordium | 6.04e-16 | 23 |
early pharyngeal endoderm | 6.04e-16 | 23 |
pharynx | 2.55e-15 | 24 |
gland of gut | 2.55e-15 | 24 |
upper respiratory tract | 2.55e-15 | 24 |
chordate pharynx | 2.55e-15 | 24 |
pharyngeal arch system | 2.55e-15 | 24 |
pharyngeal region of foregut | 2.55e-15 | 24 |
segment of respiratory tract | 1.02e-13 | 27 |
hemopoietic organ | 7.80e-13 | 29 |
immune organ | 7.80e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 8.81e-11 | 35 |
craniocervical region | 1.67e-10 | 36 |
respiratory tract | 2.53e-09 | 41 |
respiratory system | 4.04e-09 | 42 |
anterior region of body | 6.31e-09 | 43 |
hematopoietic system | 1.45e-08 | 45 |
blood island | 1.45e-08 | 45 |
hemolymphoid system | 4.46e-08 | 48 |
immune system | 4.46e-08 | 48 |
gut epithelium | 3.83e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.