FFCP PHASE1:Mm9::chr10:40941126..40941138,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:40941126..40941138,-|id=chr10:40941126..40941138,-|ontology_enrichment_celltype=CL:0002027!4.70e-14!3;CL:0002006!4.70e-14!3;CL:0002024!4.70e-14!3;CL:0000553!8.36e-12!6;CL:0000556!8.36e-12!6;CL:0000050!6.78e-08!9|ontology_enrichment_celltype_v019_2=CL:0002027,3.67e-34,3;CL:0002006,3.67e-34,3;CL:0002024,3.67e-34,3;CL:0000553,1.70e-17,6;CL:0000556,1.70e-17,6;CL:0000050,6.65e-12,9;CL:0000839,1.95e-08,13;CL:0000763,5.79e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!8.90e-12!6;UBERON:0004457!8.90e-12!6;UBERON:0000042!8.90e-12!6;UBERON:0004854!8.90e-12!6;UBERON:0009034!8.90e-12!6;UBERON:0002095!8.90e-12!6;UBERON:0004782!8.90e-12!6;UBERON:0003281!8.90e-12!6;UBERON:0009664!8.90e-12!6;UBERON:0002296!8.90e-12!6;UBERON:0005602!8.90e-12!6;UBERON:0001179!8.90e-12!6;UBERON:0006293!8.90e-12!6;UBERON:0003887!1.46e-10!10;UBERON:0000981!7.41e-10!4;UBERON:0002495!7.41e-10!4;UBERON:0003608!7.41e-10!4;UBERON:0003826!7.41e-10!4;UBERON:0008202!7.41e-10!4;UBERON:0004375!7.41e-10!4;UBERON:0002428!7.41e-10!4;UBERON:0003464!7.41e-10!4;UBERON:0003606!7.41e-10!4;UBERON:0009749!7.41e-10!4;UBERON:0003860!7.41e-10!4;UBERON:0005856!7.41e-10!4;UBERON:0005866!7.41e-10!4;UBERON:0007828!7.41e-10!4;UBERON:0005254!7.41e-10!4;UBERON:0001271!7.41e-10!4;UBERON:0002091!7.41e-10!4;UBERON:0001464!7.41e-10!4;UBERON:0003285!7.41e-10!4;UBERON:0010129!7.41e-10!4;UBERON:0006234!7.41e-10!4;UBERON:0001474!1.13e-08!22;UBERON:0004765!1.13e-08!22;UBERON:0001434!1.13e-08!22;UBERON:0005418!5.63e-08!5;UBERON:0002472!5.63e-08!5;UBERON:0008784!5.63e-08!5;UBERON:0006058!5.63e-08!5;UBERON:0007823!5.63e-08!5;UBERON:0004709!5.63e-08!5;UBERON:0005420!5.63e-08!5;UBERON:0006057!5.63e-08!5;UBERON:0000978!5.63e-08!5;UBERON:0002103!5.63e-08!5;UBERON:0000376!5.63e-08!5;UBERON:0000154!5.63e-08!5;UBERON:0005730!5.63e-08!5;UBERON:0002204!2.22e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.35e-29,6;UBERON:0004457,3.35e-29,6;UBERON:0000042,3.35e-29,6;UBERON:0004854,3.35e-29,6;UBERON:0009034,3.35e-29,6;UBERON:0002095,3.35e-29,6;UBERON:0004782,3.35e-29,6;UBERON:0003281,3.35e-29,6;UBERON:0009664,3.35e-29,6;UBERON:0002296,3.35e-29,6;UBERON:0005602,3.35e-29,6;UBERON:0001179,3.35e-29,6;UBERON:0006293,3.35e-29,6;UBERON:0003887,9.37e-18,10;UBERON:0002390,5.49e-12,45;UBERON:0003061,5.49e-12,45;UBERON:0000945,2.82e-11,16;UBERON:0010039,2.82e-11,16;UBERON:0002193,3.09e-11,48;UBERON:0002405,3.09e-11,48;UBERON:0002075,1.46e-09,19;UBERON:0004923,1.20e-07,24;UBERON:0002371,5.79e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32908547449759,12.5534665781692,35.6776557845355,0,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.486405680325106,1.09824565275233,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93003025835061,0,0,1.50694765603753,4.23752105935178,2.97411625168479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr10:40941126..40941138,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:40941126..40941138,- | |||
|id=chr10:40941126..40941138,- | |||
|ontology_enrichment_celltype=CL:0002027!4.70e-14!3;CL:0002006!4.70e-14!3;CL:0002024!4.70e-14!3;CL:0000553!8.36e-12!6;CL:0000556!8.36e-12!6;CL:0000050!6.78e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,3.67e-34,3;CL:0002006,3.67e-34,3;CL:0002024,3.67e-34,3;CL:0000553,1.70e-17,6;CL:0000556,1.70e-17,6;CL:0000050,6.65e-12,9;CL:0000839,1.95e-08,13;CL:0000763,5.79e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!8.90e-12!6;UBERON:0004457!8.90e-12!6;UBERON:0000042!8.90e-12!6;UBERON:0004854!8.90e-12!6;UBERON:0009034!8.90e-12!6;UBERON:0002095!8.90e-12!6;UBERON:0004782!8.90e-12!6;UBERON:0003281!8.90e-12!6;UBERON:0009664!8.90e-12!6;UBERON:0002296!8.90e-12!6;UBERON:0005602!8.90e-12!6;UBERON:0001179!8.90e-12!6;UBERON:0006293!8.90e-12!6;UBERON:0003887!1.46e-10!10;UBERON:0000981!7.41e-10!4;UBERON:0002495!7.41e-10!4;UBERON:0003608!7.41e-10!4;UBERON:0003826!7.41e-10!4;UBERON:0008202!7.41e-10!4;UBERON:0004375!7.41e-10!4;UBERON:0002428!7.41e-10!4;UBERON:0003464!7.41e-10!4;UBERON:0003606!7.41e-10!4;UBERON:0009749!7.41e-10!4;UBERON:0003860!7.41e-10!4;UBERON:0005856!7.41e-10!4;UBERON:0005866!7.41e-10!4;UBERON:0007828!7.41e-10!4;UBERON:0005254!7.41e-10!4;UBERON:0001271!7.41e-10!4;UBERON:0002091!7.41e-10!4;UBERON:0001464!7.41e-10!4;UBERON:0003285!7.41e-10!4;UBERON:0010129!7.41e-10!4;UBERON:0006234!7.41e-10!4;UBERON:0001474!1.13e-08!22;UBERON:0004765!1.13e-08!22;UBERON:0001434!1.13e-08!22;UBERON:0005418!5.63e-08!5;UBERON:0002472!5.63e-08!5;UBERON:0008784!5.63e-08!5;UBERON:0006058!5.63e-08!5;UBERON:0007823!5.63e-08!5;UBERON:0004709!5.63e-08!5;UBERON:0005420!5.63e-08!5;UBERON:0006057!5.63e-08!5;UBERON:0000978!5.63e-08!5;UBERON:0002103!5.63e-08!5;UBERON:0000376!5.63e-08!5;UBERON:0000154!5.63e-08!5;UBERON:0005730!5.63e-08!5;UBERON:0002204!2.22e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.35e-29,6;UBERON:0004457,3.35e-29,6;UBERON:0000042,3.35e-29,6;UBERON:0004854,3.35e-29,6;UBERON:0009034,3.35e-29,6;UBERON:0002095,3.35e-29,6;UBERON:0004782,3.35e-29,6;UBERON:0003281,3.35e-29,6;UBERON:0009664,3.35e-29,6;UBERON:0002296,3.35e-29,6;UBERON:0005602,3.35e-29,6;UBERON:0001179,3.35e-29,6;UBERON:0006293,3.35e-29,6;UBERON:0003887,9.37e-18,10;UBERON:0002390,5.49e-12,45;UBERON:0003061,5.49e-12,45;UBERON:0000945,2.82e-11,16;UBERON:0010039,2.82e-11,16;UBERON:0002193,3.09e-11,48;UBERON:0002405,3.09e-11,48;UBERON:0002075,1.46e-09,19;UBERON:0004923,1.20e-07,24;UBERON:0002371,5.79e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32908547449759,12.5534665781692,35.6776557845355,0,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.486405680325106,1.09824565275233,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93003025835061,0,0,1.50694765603753,4.23752105935178,2.97411625168479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr10:40941126..40941138,- | |||
}} |
Revision as of 16:42, 12 September 2013
Short description: | p@chr10:40941126..40941138, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:40941126..40941138, - |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 3.67e-34 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.67e-34 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.67e-34 | 3 |
megakaryocyte progenitor cell | 1.70e-17 | 6 |
megakaryocyte | 1.70e-17 | 6 |
megakaryocyte-erythroid progenitor cell | 6.65e-12 | 9 |
myeloid lineage restricted progenitor cell | 1.95e-08 | 13 |
myeloid cell | 5.79e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.35e-29 | 6 |
cavity lining | 3.35e-29 | 6 |
serous membrane | 3.35e-29 | 6 |
gastrointestinal system mesentery | 3.35e-29 | 6 |
stomach region | 3.35e-29 | 6 |
mesentery | 3.35e-29 | 6 |
gastrointestinal system serosa | 3.35e-29 | 6 |
mesentery of stomach | 3.35e-29 | 6 |
gut mesentery | 3.35e-29 | 6 |
dorsal mesentery | 3.35e-29 | 6 |
dorsal mesogastrium | 3.35e-29 | 6 |
peritoneal cavity | 3.35e-29 | 6 |
spleen primordium | 3.35e-29 | 6 |
intraembryonic coelom | 9.37e-18 | 10 |
hematopoietic system | 5.49e-12 | 45 |
blood island | 5.49e-12 | 45 |
stomach | 2.82e-11 | 16 |
food storage organ | 2.82e-11 | 16 |
hemolymphoid system | 3.09e-11 | 48 |
immune system | 3.09e-11 | 48 |
viscus | 1.46e-09 | 19 |
organ component layer | 1.20e-07 | 24 |
bone marrow | 5.79e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.