FFCP PHASE1:Hg19::chr2:218989991..218990023,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3579|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6027|TSSclassifier=S|UniProt=C9JW47,P25025,Q53PC4|association_with_transcript=0bp_to_ENST00000453237,NM_001168298,uc002vgz.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_5_at_CXCR2_5end|id=chr2:218989991..218990023,+|ontology_enrichment_celltype=CL:0000763!3.85e-26!112;CL:0000049!3.85e-26!112;CL:0000037!7.64e-21!172;CL:0000566!7.64e-21!172;CL:0000766!7.79e-21!76;CL:0002032!1.13e-20!165;CL:0000837!1.13e-20!165;CL:0000988!1.04e-18!182;CL:0002194!1.85e-17!63;CL:0000576!1.85e-17!63;CL:0000040!1.85e-17!63;CL:0000559!1.85e-17!63;CL:0002009!1.23e-16!65;CL:0000738!6.04e-15!140;CL:0000839!8.58e-15!70;CL:0000557!1.86e-14!71;CL:0002087!8.81e-13!119;CL:0002057!1.82e-10!42;CL:0002031!2.21e-10!124;CL:0000860!2.09e-09!45;CL:0000094!4.34e-08!8;CL:0000775!7.07e-07!3|ontology_enrichment_celltype_v019=CL:0000775;4.76e-19;3!CL:0000094;1.11e-18;8!CL:0000081;1.58e-13;11!CL:0000771;9.83e-13;2!CL:0000763;4.53e-07;100|ontology_enrichment_celltype_v019_2=CL:0000775,4.23e-19,3;CL:0000094,9.39e-19,8;CL:0000763,5.54e-17,108;CL:0000049,5.54e-17,108;CL:0000081,1.41e-13,11;CL:0000771,8.49e-13,2;CL:0002032,2.96e-11,161;CL:0000837,2.96e-11,161;CL:0000037,1.32e-10,168;CL:0000988,7.56e-10,177;CL:0000766,3.53e-09,72|ontology_enrichment_development_v019=CL:0000049;3.01e-07;108|ontology_enrichment_disease=DOID:8692!4.18e-11!31;DOID:1240!6.73e-08!39|ontology_enrichment_disease_v019=DOID:8692;1.77e-19;31!DOID:1240;3.53e-13;39!DOID:2531;8.37e-08;51!DOID:0060083;8.37e-08;51!DOID:225;8.92e-07;1|ontology_enrichment_disease_v019_2=DOID:8692,1.53e-20,31;DOID:1240,6.71e-16,39;DOID:2531,1.14e-11,51;DOID:0060083,1.14e-11,51;DOID:225,9.18e-07,1|ontology_enrichment_uberon=UBERON:0002390!5.86e-21!102;UBERON:0003061!5.86e-21!102;UBERON:0002193!4.51e-20!112;UBERON:0007023!4.39e-12!115;UBERON:0002371!7.85e-12!80;UBERON:0000178!1.98e-10!15;UBERON:0000179!1.98e-10!15;UBERON:0000463!1.98e-10!15;UBERON:0001474!2.09e-10!86;UBERON:0002405!4.30e-10!115;UBERON:0004765!1.18e-07!101;UBERON:0001434!1.18e-07!101|ontology_enrichment_uberon_v019=UBERON:0000178;4.31e-24;15!UBERON:0000179;4.31e-24;15!UBERON:0000463;4.31e-24;15!UBERON:0002390;3.99e-10;32!UBERON:0002171;8.92e-07;1!UBERON:0006518;8.92e-07;1!UBERON:0008949;8.92e-07;1!UBERON:0000101;8.92e-07;1!UBERON:0002167;8.92e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.06e-24,15;UBERON:0000179,4.06e-24,15;UBERON:0000463,4.06e-24,15;UBERON:0002390,4.35e-10,98;UBERON:0003061,4.35e-10,98;UBERON:0002193,6.98e-09,108;UBERON:0002171,7.73e-07,1;UBERON:0006518,7.73e-07,1;UBERON:0008949,7.73e-07,1;UBERON:0000101,7.73e-07,1;UBERON:0002167,7.73e-07,1|phase1_expression=0,0.428201047781966,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0.515151135268373,1.16318591023652,0.377875943688809,0.727752183563449,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0.65156653411535,0,0.368277635987565,0,0.845021145247767,0.637812899895131,0.628975936525128,2.58355851636939,2.4028302854641,2.08943262706204,0,0,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.602300476311091,0.639933055772092,0,1.18388626022008,0.821127996921047,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,8.98808428736619,8.97484377612075,20.7207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,7.61171413848254,9.1756464857085,4.5571774973933,5.95579438644473,4.11362273086194,10.3755729790835,6.48037724685738,3.17250070517708,0,0,0,0,0,0,0,0,1.53204296105893,0,0,2.24637742490767,0.684704037099577,2.35019843659535,2.50634477090067,0,0.963528450622197,0.80719882876419,7.23938604073555,8.24412827413835,7.06653757909453,7.38131156044973,8.17560794388352,5.66625476665917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,4.09257896181497,0.09864340563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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6027 | |||
|TSSclassifier=S | |||
|UniProt=C9JW47,P25025,Q53PC4 | |||
|association_with_transcript=0bp_to_ENST00000453237,NM_001168298,uc002vgz.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_CXCR2_5end | |||
|id=chr2:218989991..218990023,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.85e-26!112;CL:0000049!3.85e-26!112;CL:0000037!7.64e-21!172;CL:0000566!7.64e-21!172;CL:0000766!7.79e-21!76;CL:0002032!1.13e-20!165;CL:0000837!1.13e-20!165;CL:0000988!1.04e-18!182;CL:0002194!1.85e-17!63;CL:0000576!1.85e-17!63;CL:0000040!1.85e-17!63;CL:0000559!1.85e-17!63;CL:0002009!1.23e-16!65;CL:0000738!6.04e-15!140;CL:0000839!8.58e-15!70;CL:0000557!1.86e-14!71;CL:0002087!8.81e-13!119;CL:0002057!1.82e-10!42;CL:0002031!2.21e-10!124;CL:0000860!2.09e-09!45;CL:0000094!4.34e-08!8;CL:0000775!7.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;4.76e-19;3!CL:0000094;1.11e-18;8!CL:0000081;1.58e-13;11!CL:0000771;9.83e-13;2!CL:0000763;4.53e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.23e-19,3;CL:0000094,9.39e-19,8;CL:0000763,5.54e-17,108;CL:0000049,5.54e-17,108;CL:0000081,1.41e-13,11;CL:0000771,8.49e-13,2;CL:0002032,2.96e-11,161;CL:0000837,2.96e-11,161;CL:0000037,1.32e-10,168;CL:0000988,7.56e-10,177;CL:0000766,3.53e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000049;3.01e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!4.18e-11!31;DOID:1240!6.73e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.77e-19;31!DOID:1240;3.53e-13;39!DOID:2531;8.37e-08;51!DOID:0060083;8.37e-08;51!DOID:225;8.92e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.53e-20,31;DOID:1240,6.71e-16,39;DOID:2531,1.14e-11,51;DOID:0060083,1.14e-11,51;DOID:225,9.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.86e-21!102;UBERON:0003061!5.86e-21!102;UBERON:0002193!4.51e-20!112;UBERON:0007023!4.39e-12!115;UBERON:0002371!7.85e-12!80;UBERON:0000178!1.98e-10!15;UBERON:0000179!1.98e-10!15;UBERON:0000463!1.98e-10!15;UBERON:0001474!2.09e-10!86;UBERON:0002405!4.30e-10!115;UBERON:0004765!1.18e-07!101;UBERON:0001434!1.18e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.31e-24;15!UBERON:0000179;4.31e-24;15!UBERON:0000463;4.31e-24;15!UBERON:0002390;3.99e-10;32!UBERON:0002171;8.92e-07;1!UBERON:0006518;8.92e-07;1!UBERON:0008949;8.92e-07;1!UBERON:0000101;8.92e-07;1!UBERON:0002167;8.92e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.06e-24,15;UBERON:0000179,4.06e-24,15;UBERON:0000463,4.06e-24,15;UBERON:0002390,4.35e-10,98;UBERON:0003061,4.35e-10,98;UBERON:0002193,6.98e-09,108;UBERON:0002171,7.73e-07,1;UBERON:0006518,7.73e-07,1;UBERON:0008949,7.73e-07,1;UBERON:0000101,7.73e-07,1;UBERON:0002167,7.73e-07,1 | |||
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|short_description=p5@CXCR2 | |||
}} |
Revision as of 16:48, 12 September 2013
Short description: | p5@CXCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CXCR2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000453237, NM_001168298, uc002vgz.1_5end |
EntrezGene: | CXCR2 |
HGNC: | 6027 |
UniProt: | C9JW47P25025Q53PC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.23e-19 | 3 |
granulocyte | 9.39e-19 | 8 |
myeloid cell | 5.54e-17 | 108 |
common myeloid progenitor | 5.54e-17 | 108 |
blood cell | 1.41e-13 | 11 |
eosinophil | 8.49e-13 | 2 |
hematopoietic oligopotent progenitor cell | 2.96e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.96e-11 | 161 |
hematopoietic stem cell | 1.32e-10 | 168 |
hematopoietic cell | 7.56e-10 | 177 |
myeloid leukocyte | 3.53e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 4.06e-24 | 15 |
haemolymphatic fluid | 4.06e-24 | 15 |
organism substance | 4.06e-24 | 15 |
hematopoietic system | 4.35e-10 | 98 |
blood island | 4.35e-10 | 98 |
hemolymphoid system | 6.98e-09 | 108 |
lower lobe of right lung | 7.73e-07 | 1 |
right lung lobe | 7.73e-07 | 1 |
lower lobe of lung | 7.73e-07 | 1 |
lobe of lung | 7.73e-07 | 1 |
right lung | 7.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.53e-20 | 31 |
leukemia | 6.71e-16 | 39 |
hematologic cancer | 1.14e-11 | 51 |
immune system cancer | 1.14e-11 | 51 |
syndrome | 9.18e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.