FFCP PHASE1:Hg19::chr2:218990431..218990448,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3579|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6027|TSSclassifier=S|UniProt=Q6LCZ7|association_with_transcript=3bp_to_ENST00000449014_5end|coexpression_cluster_id=C2|description=CAGE_peak_6_at_CXCR2_5end|id=chr2:218990431..218990448,+|ontology_enrichment_celltype=CL:0000763!3.48e-29!112;CL:0000049!3.48e-29!112;CL:0000037!3.10e-28!172;CL:0000566!3.10e-28!172;CL:0000988!1.48e-25!182;CL:0002032!1.02e-24!165;CL:0000837!1.02e-24!165;CL:0000766!6.21e-20!76;CL:0002057!3.34e-18!42;CL:0000738!6.11e-17!140;CL:0002194!1.62e-16!63;CL:0000576!1.62e-16!63;CL:0000040!1.62e-16!63;CL:0000559!1.62e-16!63;CL:0000860!1.79e-16!45;CL:0002009!9.90e-16!65;CL:0000557!6.66e-15!71;CL:0002087!1.36e-14!119;CL:0000839!5.68e-14!70;CL:0002031!4.17e-11!124;CL:0000094!3.47e-08!8;CL:0000775!6.57e-07!3|ontology_enrichment_celltype_v019=CL:0000775;9.15e-21;3!CL:0000094;1.56e-20;8!CL:0000081;7.02e-15;11!CL:0000771;5.69e-14;2!CL:0000763;5.61e-08;100!CL:0002032;2.17e-07;1!CL:0000557;2.17e-07;1|ontology_enrichment_celltype_v019_2=CL:0000775,9.16e-21,3;CL:0000094,1.53e-20,8;CL:0000763,9.28e-19,108;CL:0000049,9.28e-19,108;CL:0000081,6.92e-15,11;CL:0000771,5.52e-14,2;CL:0002032,1.15e-12,161;CL:0000837,1.15e-12,161;CL:0000766,5.13e-12,72;CL:0000037,5.78e-12,168;CL:0000988,3.81e-11,177|ontology_enrichment_development_v019=CL:0000049;1.22e-09;108|ontology_enrichment_disease=DOID:8692!1.78e-15!31;DOID:1240!3.90e-11!39;DOID:2531!3.71e-08!51;DOID:0060083!3.71e-08!51|ontology_enrichment_disease_v019=DOID:8692;1.49e-14;31!DOID:1240;1.65e-09;39!DOID:225;1.26e-07;1|ontology_enrichment_disease_v019_2=DOID:8692,1.17e-14,31;DOID:1240,2.32e-11,39;DOID:2531,2.35e-08,51;DOID:0060083,2.35e-08,51;DOID:225,1.15e-07,1|ontology_enrichment_uberon=UBERON:0002390!4.13e-26!102;UBERON:0003061!4.13e-26!102;UBERON:0002193!1.93e-22!112;UBERON:0000178!1.35e-15!15;UBERON:0000179!1.35e-15!15;UBERON:0000463!1.35e-15!15;UBERON:0002371!3.36e-13!80;UBERON:0001474!1.22e-11!86;UBERON:0002405!3.32e-09!115;UBERON:0004765!1.28e-08!101;UBERON:0001434!1.28e-08!101|ontology_enrichment_uberon_v019=UBERON:0000178;1.34e-33;15!UBERON:0000179;1.34e-33;15!UBERON:0000463;1.34e-33;15!UBERON:0002390;1.72e-20;32!UBERON:0002193;5.39e-12;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.37e-33,15;UBERON:0000179,1.37e-33,15;UBERON:0000463,1.37e-33,15;UBERON:0002390,5.91e-19,98;UBERON:0003061,5.91e-19,98;UBERON:0002193,7.38e-17,108;UBERON:0003081,3.20e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0.293600439334847,0,0.200544447470142,0,0,0.32389366601898,0,1.16318591023652,1.13362783106643,1.94067248950253,0.697287110717054,0.822335776043652,0.309706370895104,0,0,0,0,0,0,0.941211697713023,0.545812300115692,0.224723484445085,0,0.320929027076094,0.639337125799041,0.659702600373432,0.398927315243264,0.852449501065388,0,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0.633765858935825,0,0.419317291016752,1.90958672949042,1.20141514273205,0.803627933485401,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.752875595388864,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,20.9721966705211,26.9245313283622,41.4415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,13.1936378400364,9.94028369285088,12.5322381178316,7.14695326373367,10.2840568271549,15.5633594686252,10.2605973075242,7.9312517629427,0,0,0,0,0,0,0,0.199579371432817,0.766021480529467,0.211673582723883,0,2.52717460302113,0.912938716132769,1.25343916618419,5.01268954180134,0,0.321176150207399,1.21079824314629,0.851692475380653,1.03051603426729,1.84344458585075,3.35514161838624,2.33588798396672,0.781552381608161,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0.69169171316418,0.628303510868405,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.60129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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6027 | |||
|TSSclassifier=S | |||
|UniProt=Q6LCZ7 | |||
|association_with_transcript=3bp_to_ENST00000449014_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_CXCR2_5end | |||
|id=chr2:218990431..218990448,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.48e-29!112;CL:0000049!3.48e-29!112;CL:0000037!3.10e-28!172;CL:0000566!3.10e-28!172;CL:0000988!1.48e-25!182;CL:0002032!1.02e-24!165;CL:0000837!1.02e-24!165;CL:0000766!6.21e-20!76;CL:0002057!3.34e-18!42;CL:0000738!6.11e-17!140;CL:0002194!1.62e-16!63;CL:0000576!1.62e-16!63;CL:0000040!1.62e-16!63;CL:0000559!1.62e-16!63;CL:0000860!1.79e-16!45;CL:0002009!9.90e-16!65;CL:0000557!6.66e-15!71;CL:0002087!1.36e-14!119;CL:0000839!5.68e-14!70;CL:0002031!4.17e-11!124;CL:0000094!3.47e-08!8;CL:0000775!6.57e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;9.15e-21;3!CL:0000094;1.56e-20;8!CL:0000081;7.02e-15;11!CL:0000771;5.69e-14;2!CL:0000763;5.61e-08;100!CL:0002032;2.17e-07;1!CL:0000557;2.17e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,9.16e-21,3;CL:0000094,1.53e-20,8;CL:0000763,9.28e-19,108;CL:0000049,9.28e-19,108;CL:0000081,6.92e-15,11;CL:0000771,5.52e-14,2;CL:0002032,1.15e-12,161;CL:0000837,1.15e-12,161;CL:0000766,5.13e-12,72;CL:0000037,5.78e-12,168;CL:0000988,3.81e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000049;1.22e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!1.78e-15!31;DOID:1240!3.90e-11!39;DOID:2531!3.71e-08!51;DOID:0060083!3.71e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.49e-14;31!DOID:1240;1.65e-09;39!DOID:225;1.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.17e-14,31;DOID:1240,2.32e-11,39;DOID:2531,2.35e-08,51;DOID:0060083,2.35e-08,51;DOID:225,1.15e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.13e-26!102;UBERON:0003061!4.13e-26!102;UBERON:0002193!1.93e-22!112;UBERON:0000178!1.35e-15!15;UBERON:0000179!1.35e-15!15;UBERON:0000463!1.35e-15!15;UBERON:0002371!3.36e-13!80;UBERON:0001474!1.22e-11!86;UBERON:0002405!3.32e-09!115;UBERON:0004765!1.28e-08!101;UBERON:0001434!1.28e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.34e-33;15!UBERON:0000179;1.34e-33;15!UBERON:0000463;1.34e-33;15!UBERON:0002390;1.72e-20;32!UBERON:0002193;5.39e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.37e-33,15;UBERON:0000179,1.37e-33,15;UBERON:0000463,1.37e-33,15;UBERON:0002390,5.91e-19,98;UBERON:0003061,5.91e-19,98;UBERON:0002193,7.38e-17,108;UBERON:0003081,3.20e-07,203 | |||
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|short_description=p6@CXCR2 | |||
}} |
Revision as of 16:48, 12 September 2013
Short description: | p6@CXCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CXCR2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 3bp_to_ENST00000449014_5end |
EntrezGene: | CXCR2 |
HGNC: | 6027 |
UniProt: | Q6LCZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 9.16e-21 | 3 |
granulocyte | 1.53e-20 | 8 |
myeloid cell | 9.28e-19 | 108 |
common myeloid progenitor | 9.28e-19 | 108 |
blood cell | 6.92e-15 | 11 |
eosinophil | 5.52e-14 | 2 |
hematopoietic oligopotent progenitor cell | 1.15e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-12 | 161 |
myeloid leukocyte | 5.13e-12 | 72 |
hematopoietic stem cell | 5.78e-12 | 168 |
hematopoietic cell | 3.81e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 1.37e-33 | 15 |
haemolymphatic fluid | 1.37e-33 | 15 |
organism substance | 1.37e-33 | 15 |
hematopoietic system | 5.91e-19 | 98 |
blood island | 5.91e-19 | 98 |
hemolymphoid system | 7.38e-17 | 108 |
lateral plate mesoderm | 3.20e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.17e-14 | 31 |
leukemia | 2.32e-11 | 39 |
hematologic cancer | 2.35e-08 | 51 |
immune system cancer | 2.35e-08 | 51 |
syndrome | 1.15e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.