FFCP PHASE1:Mm9::chr10:50076400..50076404,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:50076400..50076404,+|id=chr10:50076400..50076404,+|ontology_enrichment_celltype=CL:0000553!1.04e-10!6;CL:0000556!1.04e-10!6;CL:0000050!9.93e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,1.06e-40,6;CL:0000556,1.06e-40,6;CL:0002027,1.83e-30,3;CL:0002006,1.83e-30,3;CL:0002024,1.83e-30,3;CL:0000050,2.90e-27,9;CL:0000839,5.70e-19,13;CL:0000763,1.85e-15,16;CL:0000049,4.74e-13,19;CL:0002031,5.89e-10,25;CL:0000988,8.44e-08,32;CL:0002032,8.44e-08,32;CL:0000037,8.44e-08,32;CL:0000837,8.44e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.18e-08!66|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.85e-15,16;UBERON:0001474,2.70e-11,22;UBERON:0004765,2.70e-11,22;UBERON:0001434,2.70e-11,22;UBERON:0002390,8.00e-08,45;UBERON:0003061,8.00e-08,45;UBERON:0002204,8.44e-08,32;UBERON:0002193,2.51e-07,48;UBERON:0002405,2.51e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,1.66554880907831,7.69406016081339,4.89693314689703,0.946386496074713,1.09691546884591,1.27316895539409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.23517741427141,0.251333182659351,0,0,0,0,0.883366073841574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0.486412857275134,0.146199987425332,0.439100230582101,0.402619256281115,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,1.12431056192427,0.608580364165509,0.482354319504834,0.50925170356284,2.30156909960649,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0.234690248288502,0,0.476087281772027,0.975668239288994,0,0.221464689648775,0.637819074629948,0.327726629431476,0.172684981865896,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.854354403989263,0,0.185194527369712,0,0.136694227721025,2.51655990527175,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.561849044819294,0,0,0,0,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.578719832943424,0,0,0,0,0.220591419119515,0|short_description=p@chr10:50076400..50076404,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:50076400..50076404,+ | |||
|id=chr10:50076400..50076404,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.04e-10!6;CL:0000556!1.04e-10!6;CL:0000050!9.93e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.06e-40,6;CL:0000556,1.06e-40,6;CL:0002027,1.83e-30,3;CL:0002006,1.83e-30,3;CL:0002024,1.83e-30,3;CL:0000050,2.90e-27,9;CL:0000839,5.70e-19,13;CL:0000763,1.85e-15,16;CL:0000049,4.74e-13,19;CL:0002031,5.89e-10,25;CL:0000988,8.44e-08,32;CL:0002032,8.44e-08,32;CL:0000037,8.44e-08,32;CL:0000837,8.44e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.18e-08!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.85e-15,16;UBERON:0001474,2.70e-11,22;UBERON:0004765,2.70e-11,22;UBERON:0001434,2.70e-11,22;UBERON:0002390,8.00e-08,45;UBERON:0003061,8.00e-08,45;UBERON:0002204,8.44e-08,32;UBERON:0002193,2.51e-07,48;UBERON:0002405,2.51e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,1.66554880907831,7.69406016081339,4.89693314689703,0.946386496074713,1.09691546884591,1.27316895539409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.23517741427141,0.251333182659351,0,0,0,0,0.883366073841574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0.486412857275134,0.146199987425332,0.439100230582101,0.402619256281115,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,1.12431056192427,0.608580364165509,0.482354319504834,0.50925170356284,2.30156909960649,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0.234690248288502,0,0.476087281772027,0.975668239288994,0,0.221464689648775,0.637819074629948,0.327726629431476,0.172684981865896,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.854354403989263,0,0.185194527369712,0,0.136694227721025,2.51655990527175,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.561849044819294,0,0,0,0,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.578719832943424,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr10:50076400..50076404,+ | |||
}} |
Revision as of 16:50, 12 September 2013
Short description: | p@chr10:50076400..50076404, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:50076400..50076404, + |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.06e-40 | 6 |
megakaryocyte | 1.06e-40 | 6 |
CD9-positive, CD41-positive megakaryocyte cell | 1.83e-30 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.83e-30 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.83e-30 | 3 |
megakaryocyte-erythroid progenitor cell | 2.90e-27 | 9 |
myeloid lineage restricted progenitor cell | 5.70e-19 | 13 |
myeloid cell | 1.85e-15 | 16 |
common myeloid progenitor | 4.74e-13 | 19 |
hematopoietic lineage restricted progenitor cell | 5.89e-10 | 25 |
hematopoietic cell | 8.44e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.44e-08 | 32 |
hematopoietic stem cell | 8.44e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.44e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.85e-15 | 16 |
bone element | 2.70e-11 | 22 |
skeletal element | 2.70e-11 | 22 |
skeletal system | 2.70e-11 | 22 |
hematopoietic system | 8.00e-08 | 45 |
blood island | 8.00e-08 | 45 |
musculoskeletal system | 8.44e-08 | 32 |
hemolymphoid system | 2.51e-07 | 48 |
immune system | 2.51e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.