FFCP PHASE1:Hg19::chr2:232469321..232469404,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C446|description=CAGE_peak_at_chr2:232469321..232469404,-|id=chr2:232469321..232469404,-|ontology_enrichment_celltype=CL:0002057!1.65e-20!42;CL:0000860!1.27e-19!45;CL:0000738!1.55e-15!140;CL:0000766!1.67e-14!76;CL:0000557!2.65e-11!71;CL:0002087!4.20e-11!119;CL:0002031!5.17e-11!124;CL:0002009!1.64e-10!65;CL:0002194!6.43e-10!63;CL:0000576!6.43e-10!63;CL:0000040!6.43e-10!63;CL:0000559!6.43e-10!63;CL:0000839!1.90e-09!70;CL:0000037!6.45e-09!172;CL:0000566!6.45e-09!172;CL:0002032!8.25e-08!165;CL:0000837!8.25e-08!165;CL:0000988!2.32e-07!182;CL:0000094!5.22e-07!8;CL:0002393!8.67e-07!9;CL:0002397!8.67e-07!9|ontology_enrichment_celltype_v019=CL:0000860;4.52e-19;33!CL:0002057;4.52e-19;33!CL:0000576;1.25e-17;48!CL:0000766;1.73e-15;69!CL:0000473;4.16e-13;39!CL:0000234;4.16e-13;39!CL:0000094;2.60e-11;8!CL:0000081;3.94e-09;11!CL:0002087;1.27e-08;104!CL:0000624;2.82e-07;6!CL:0000738;2.84e-07;136!CL:0002393;4.51e-07;6!CL:0002397;4.51e-07;6|ontology_enrichment_celltype_v019_2=CL:0000738,1.10e-32,136;CL:0000860,3.98e-30,42;CL:0002057,3.98e-30,42;CL:0000766,2.21e-29,72;CL:0002031,7.98e-25,120;CL:0000473,1.23e-24,48;CL:0000234,1.23e-24,48;CL:0000037,3.35e-24,168;CL:0002087,7.75e-24,115;CL:0000988,2.35e-22,177;CL:0000557,2.49e-22,67;CL:0002032,5.60e-22,161;CL:0000837,5.60e-22,161;CL:0000839,2.44e-20,66;CL:0002009,6.25e-20,61;CL:0002194,1.38e-19,59;CL:0000576,1.38e-19,59;CL:0000040,1.38e-19,59;CL:0000559,1.38e-19,59;CL:0000763,1.46e-16,108;CL:0000049,1.46e-16,108;CL:0000094,3.10e-11,8;CL:0002393,7.58e-11,9;CL:0002397,7.58e-11,9;CL:0000081,5.56e-09,11;CL:0002320,6.56e-08,361;CL:0000624,2.64e-07,6;CL:0000134,4.57e-07,354|ontology_enrichment_development_v019=CL:0002057;2.98e-21;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!1.93e-09!86;UBERON:0002371!2.20e-09!80;UBERON:0002390!3.52e-09!102;UBERON:0003061!3.52e-09!102;UBERON:0002193!2.12e-07!112;UBERON:0004765!5.38e-07!101;UBERON:0001434!5.38e-07!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-20,76;UBERON:0004765,2.81e-19,90;UBERON:0001474,1.89e-18,82;UBERON:0002390,4.50e-18,98;UBERON:0003061,4.50e-18,98;UBERON:0001434,9.88e-16,100;UBERON:0002193,7.06e-15,108;UBERON:0002405,8.48e-15,93;UBERON:0002384,2.18e-07,371|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0.783556884599516,0,0.697801167972428,0,0.263766978228454,1.23766352960047,2.65117900582333,0,0,0,0,0,0,0,0,0,1.00434111675842,0.152826811495903,0.57470412614962,0.314843125254717,9.04737836752479,7.29275856384704,21.2098088943024,0,0.30120591877825,1.10926203050036,0.0774672005803016,0.710846162437108,4.69760702935756,2.76997704265939,1.60435557976113,10.8505435357926,0,0,0,1.59938062657521,2.26725566213286,3.88134497900506,5.57829688573643,4.11167888021826,5.88442104700697,2.8769239232215,1.7931249457037,0.945928919554341,8.27389633767885,6.45484683583826,10.8341189275473,5.08254316765033,2.72906150057846,5.39336362668203,5.81559395504715,1.60464513538047,6.39337125799041,0.329851300186716,2.19410023383795,1.70489900213078,3.19230162491442,0,3.11411124497787,4.52247597462138,2.60741459210101,3.69221035998698,0.605399502633369,0.736555271975129,2.53169909952708,3.59133986730301,3.61427309940574,2.72556239160889,3.59451619668784,4.8056605709282,0.964353520182481,20.5209175493699,7.75775041076451,5.84525292046829,0,1.63841583378639,2.66852776159066,1.28019066769952,0,2.29900975981793,1.98313461835459,1.90810750907073,2.27685187643779,7.6340834618222,7.64546456250458,10.5737062863221,1.68152568894461,1.58030450865046,2.16380747125216,1.57204305099666,7.81285696198135,0,3.91106719960308,0.946895611469467,1.94826728407911,0.668462741311041,3.53527088969805,1.99380505125259,1.08321545506006,0.640456598628376,0.910415432919148,0.328875809207352,0,0,1.92772532110679,0.267540828089713,0,0.339928028092699,5.3650869104269,4.81078423675682,1.01207876807801,0,0,0,0.903450714466637,0,1.24930726552346,0,0,5.24177532384304,4.01160293675261,7.82051780967114,0,0.670700859703636,0,0.361439152384566,0,0.434539556882471,0,3.89307896242109,0.0945348171640679,0,0,0.523916301990851,0,0,0,0,0.132957960518865,0.715471872916026,1.14398982156026,1.48583000531826,0.198762407366705,0,0,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0,0,0.805658634218294,0.760272105718513,0.732186172644509,0,0.81014194788176,0.17859945656816,0,0,0,0.949265659568129,0.183201743930407,10.5424333948851,19.3890132074163,0,0.496971951695318,0,0.397227542439656,0.573673241497627,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0.468642863667593,0,0,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.516628905878827,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0,0.7511902945329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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C446 | |||
|description=CAGE_peak_at_chr2:232469321..232469404,- | |||
|id=chr2:232469321..232469404,- | |||
|ontology_enrichment_celltype=CL:0002057!1.65e-20!42;CL:0000860!1.27e-19!45;CL:0000738!1.55e-15!140;CL:0000766!1.67e-14!76;CL:0000557!2.65e-11!71;CL:0002087!4.20e-11!119;CL:0002031!5.17e-11!124;CL:0002009!1.64e-10!65;CL:0002194!6.43e-10!63;CL:0000576!6.43e-10!63;CL:0000040!6.43e-10!63;CL:0000559!6.43e-10!63;CL:0000839!1.90e-09!70;CL:0000037!6.45e-09!172;CL:0000566!6.45e-09!172;CL:0002032!8.25e-08!165;CL:0000837!8.25e-08!165;CL:0000988!2.32e-07!182;CL:0000094!5.22e-07!8;CL:0002393!8.67e-07!9;CL:0002397!8.67e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.52e-19;33!CL:0002057;4.52e-19;33!CL:0000576;1.25e-17;48!CL:0000766;1.73e-15;69!CL:0000473;4.16e-13;39!CL:0000234;4.16e-13;39!CL:0000094;2.60e-11;8!CL:0000081;3.94e-09;11!CL:0002087;1.27e-08;104!CL:0000624;2.82e-07;6!CL:0000738;2.84e-07;136!CL:0002393;4.51e-07;6!CL:0002397;4.51e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.10e-32,136;CL:0000860,3.98e-30,42;CL:0002057,3.98e-30,42;CL:0000766,2.21e-29,72;CL:0002031,7.98e-25,120;CL:0000473,1.23e-24,48;CL:0000234,1.23e-24,48;CL:0000037,3.35e-24,168;CL:0002087,7.75e-24,115;CL:0000988,2.35e-22,177;CL:0000557,2.49e-22,67;CL:0002032,5.60e-22,161;CL:0000837,5.60e-22,161;CL:0000839,2.44e-20,66;CL:0002009,6.25e-20,61;CL:0002194,1.38e-19,59;CL:0000576,1.38e-19,59;CL:0000040,1.38e-19,59;CL:0000559,1.38e-19,59;CL:0000763,1.46e-16,108;CL:0000049,1.46e-16,108;CL:0000094,3.10e-11,8;CL:0002393,7.58e-11,9;CL:0002397,7.58e-11,9;CL:0000081,5.56e-09,11;CL:0002320,6.56e-08,361;CL:0000624,2.64e-07,6;CL:0000134,4.57e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.98e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.93e-09!86;UBERON:0002371!2.20e-09!80;UBERON:0002390!3.52e-09!102;UBERON:0003061!3.52e-09!102;UBERON:0002193!2.12e-07!112;UBERON:0004765!5.38e-07!101;UBERON:0001434!5.38e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-20,76;UBERON:0004765,2.81e-19,90;UBERON:0001474,1.89e-18,82;UBERON:0002390,4.50e-18,98;UBERON:0003061,4.50e-18,98;UBERON:0001434,9.88e-16,100;UBERON:0002193,7.06e-15,108;UBERON:0002405,8.48e-15,93;UBERON:0002384,2.18e-07,371 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0.783556884599516,0,0.697801167972428,0,0.263766978228454,1.23766352960047,2.65117900582333,0,0,0,0,0,0,0,0,0,1.00434111675842,0.152826811495903,0.57470412614962,0.314843125254717,9.04737836752479,7.29275856384704,21.2098088943024,0,0.30120591877825,1.10926203050036,0.0774672005803016,0.710846162437108,4.69760702935756,2.76997704265939,1.60435557976113,10.8505435357926,0,0,0,1.59938062657521,2.26725566213286,3.88134497900506,5.57829688573643,4.11167888021826,5.88442104700697,2.8769239232215,1.7931249457037,0.945928919554341,8.27389633767885,6.45484683583826,10.8341189275473,5.08254316765033,2.72906150057846,5.39336362668203,5.81559395504715,1.60464513538047,6.39337125799041,0.329851300186716,2.19410023383795,1.70489900213078,3.19230162491442,0,3.11411124497787,4.52247597462138,2.60741459210101,3.69221035998698,0.605399502633369,0.736555271975129,2.53169909952708,3.59133986730301,3.61427309940574,2.72556239160889,3.59451619668784,4.8056605709282,0.964353520182481,20.5209175493699,7.75775041076451,5.84525292046829,0,1.63841583378639,2.66852776159066,1.28019066769952,0,2.29900975981793,1.98313461835459,1.90810750907073,2.27685187643779,7.6340834618222,7.64546456250458,10.5737062863221,1.68152568894461,1.58030450865046,2.16380747125216,1.57204305099666,7.81285696198135,0,3.91106719960308,0.946895611469467,1.94826728407911,0.668462741311041,3.53527088969805,1.99380505125259,1.08321545506006,0.640456598628376,0.910415432919148,0.328875809207352,0,0,1.92772532110679,0.267540828089713,0,0.339928028092699,5.3650869104269,4.81078423675682,1.01207876807801,0,0,0,0.903450714466637,0,1.24930726552346,0,0,5.24177532384304,4.01160293675261,7.82051780967114,0,0.670700859703636,0,0.361439152384566,0,0.434539556882471,0,3.89307896242109,0.0945348171640679,0,0,0.523916301990851,0,0,0,0,0.132957960518865,0.715471872916026,1.14398982156026,1.48583000531826,0.198762407366705,0,0,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0,0,0.805658634218294,0.760272105718513,0.732186172644509,0,0.81014194788176,0.17859945656816,0,0,0,0.949265659568129,0.183201743930407,10.5424333948851,19.3890132074163,0,0.496971951695318,0,0.397227542439656,0.573673241497627,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0.468642863667593,0,0,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.516628905878827,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0,0.751190294532984,0.453728732640084,0.717558542755448,0.427114777637135,0.211931901159562,0.600182192168805,0,4.63752972082133,0.18611685633159,0.337552664482532,0,2.01947019395292,0.460249493211497,0.484938170456436,1.77504796258307,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0.365921118388786,0,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,1.38134921352481,2.3218396401599,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,1.1240175325762,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0.462985512576611,0.190254152234598,3.1608175918371,5.15091697256924,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,34.4164671797682,56.7832616462828,17.5476982462668,0,0,3.51652341630141,0,0,0,0.571652865261156,0.112131084345361,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.857867961948885,1.62786481617433,0,0,1.06617584622764,0,0.301439377059586,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,6.89607660706745,5.60631694634745,13.9893909544926,0.254094624222463,0,0.773288812777695,1.34013012267479,0.637938751653163,5.24304916763028,11.966458368161,6.21623270154053,1.2269149171914,4.50153468953709,0.271265023699736,0.415941723061614,0.535286966391485,0.946214490203608,0.819989904948992,0,0,0,0,0.368738337083406,0.260650843404249,0.391602314925481,0,1.24060815673732,3.66714141391649,0.74709290462411,0,0,0.604780586659361,0,1.38115775959256,0.561320188866147,0.384417447767103,0,0,0,0.154209693802656,0.177561725313127,0,0.519254429183621,0.116210378459959,0.362578348774867,0,0,0.229628896329213,0,0.917870904715969,0.902399225814824,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0.618246069886334,1.09883357782012,0.660075999364704,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.435050081742686,0.170453254832202,0.0890320356467374,0.165284915360978,0,1.14851441245126,0,0,0,0,0.308033580176089,0,0,1.11194531462352,0.143124886741991,0,0,0,0.511795582622668,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0,0,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,1.10273068709225,0.66343897524122,0,0,1.31178950409327,0,0.6196469961995,0.563391205064483,0.143411352204052,0,1.07001315444375,0,0.422215270595328,0.658589785919804,0.379473173765715,0.3499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| |||
|short_description=p@chr2:232469321..232469404,- | |||
}} |
Revision as of 17:22, 12 September 2013
Short description: | p@chr2:232469321..232469404, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:232469321..232469404, - |
Coexpression cluster: | C446_Neutrophils_Mast_Eosinophils_Whole_CD14_immature_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.10e-32 | 136 |
classical monocyte | 3.98e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.98e-30 | 42 |
myeloid leukocyte | 2.21e-29 | 72 |
hematopoietic lineage restricted progenitor cell | 7.98e-25 | 120 |
defensive cell | 1.23e-24 | 48 |
phagocyte | 1.23e-24 | 48 |
hematopoietic stem cell | 3.35e-24 | 168 |
nongranular leukocyte | 7.75e-24 | 115 |
hematopoietic cell | 2.35e-22 | 177 |
granulocyte monocyte progenitor cell | 2.49e-22 | 67 |
hematopoietic oligopotent progenitor cell | 5.60e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.60e-22 | 161 |
myeloid lineage restricted progenitor cell | 2.44e-20 | 66 |
macrophage dendritic cell progenitor | 6.25e-20 | 61 |
monopoietic cell | 1.38e-19 | 59 |
monocyte | 1.38e-19 | 59 |
monoblast | 1.38e-19 | 59 |
promonocyte | 1.38e-19 | 59 |
myeloid cell | 1.46e-16 | 108 |
common myeloid progenitor | 1.46e-16 | 108 |
granulocyte | 3.10e-11 | 8 |
intermediate monocyte | 7.58e-11 | 9 |
CD14-positive, CD16-positive monocyte | 7.58e-11 | 9 |
blood cell | 5.56e-09 | 11 |
connective tissue cell | 6.56e-08 | 361 |
CD4-positive, alpha-beta T cell | 2.64e-07 | 6 |
mesenchymal cell | 4.57e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.37e-20 | 76 |
skeletal element | 2.81e-19 | 90 |
bone element | 1.89e-18 | 82 |
hematopoietic system | 4.50e-18 | 98 |
blood island | 4.50e-18 | 98 |
skeletal system | 9.88e-16 | 100 |
hemolymphoid system | 7.06e-15 | 108 |
immune system | 8.48e-15 | 93 |
connective tissue | 2.18e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.