FFCP PHASE1:Hg19::chr2:56412876..56412892,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=12bp_to_ENST00000432793,uc010fca.1_5end|coexpression_cluster_id=C1237|description=CAGE_peak_3_at_ENST00000432793_5end,CAGE_peak_3_at_uc010fca.1_5end|id=chr2:56412876..56412892,-|ontology_enrichment_celltype=CL:0002139!4.02e-20!24;CL:0000115!3.59e-17!35;CL:0000071!2.98e-14!18;CL:0002546!2.98e-14!18;CL:0002078!8.57e-12!44;CL:0000213!1.53e-09!57;CL:0000215!1.53e-09!57;CL:1000413!1.65e-09!9;CL:0005020!1.52e-07!6;CL:0002138!1.52e-07!6;CL:0005022!1.52e-07!6;CL:0000222!7.81e-07!119|ontology_enrichment_celltype_v019=CL:0002139;2.93e-50;24!CL:0000071;2.22e-41;18!CL:0000115;7.18e-37;36!CL:1000413;1.71e-34;9!CL:0002078;2.79e-23;45!CL:0000213;1.34e-18;58!CL:0000215;1.34e-18;58!CL:0002544;1.15e-17;6!CL:0002543;1.90e-17;6!CL:0002138;1.27e-10;6!CL:0002618;1.16e-09;3!CL:1000306;5.21e-07;4!CL:0002547;5.21e-07;4|ontology_enrichment_celltype_v019_2=CL:0002139,3.36e-50,24;CL:0000115,1.24e-42,36;CL:0000071,2.55e-41,18;CL:0002546,2.55e-41,18;CL:1000413,1.63e-34,9;CL:0002078,1.90e-33,45;CL:0000213,3.30e-25,58;CL:0000215,3.30e-25,58;CL:0002544,9.89e-18,6;CL:0002543,2.31e-17,6;CL:0000222,1.75e-13,121;CL:0005020,1.27e-10,6;CL:0002138,1.27e-10,6;CL:0005022,1.27e-10,6;CL:0000076,2.39e-10,63;CL:0002618,1.40e-09,3;CL:1000306,4.47e-07,4;CL:0002547,4.47e-07,4|ontology_enrichment_development_v019=CL:0002546;2.22e-41;18!CL:0005022;1.27e-10;6!UBERON:0003124;9.74e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.24e-31!115;UBERON:0000055!1.18e-21!69;UBERON:0004111!9.87e-20!241;UBERON:0002049!6.90e-19!79;UBERON:0007798!6.90e-19!79;UBERON:0000025!1.66e-18!194;UBERON:0000477!3.59e-17!286;UBERON:0001981!4.99e-17!60;UBERON:0007500!4.99e-17!60;UBERON:0004537!4.99e-17!60;UBERON:0006965!4.99e-17!60;UBERON:0004872!5.42e-17!84;UBERON:0001009!1.91e-16!113;UBERON:0004535!1.60e-14!110;UBERON:0001986!2.98e-14!18;UBERON:0004638!2.98e-14!18;UBERON:0004852!2.98e-14!18;UBERON:0003914!1.27e-11!118;UBERON:0000487!1.14e-10!22;UBERON:0001637!3.96e-10!42;UBERON:0003509!3.96e-10!42;UBERON:0004572!3.96e-10!42;UBERON:0003915!1.65e-09!9;UBERON:0004700!1.65e-09!9;UBERON:0001917!1.65e-09!9;UBERON:0001049!3.64e-09!57;UBERON:0005068!3.64e-09!57;UBERON:0006241!3.64e-09!57;UBERON:0007135!3.64e-09!57;UBERON:0002020!5.21e-09!34;UBERON:0003528!5.21e-09!34;UBERON:0000483!6.57e-09!309;UBERON:0001893!7.69e-09!34;UBERON:0006914!9.06e-09!25;UBERON:0002616!9.84e-09!59;UBERON:0000119!1.37e-08!312;UBERON:0003080!1.62e-08!42;UBERON:0002791!2.68e-08!33;UBERON:0001869!4.46e-08!32;UBERON:0002780!7.13e-08!41;UBERON:0001890!7.13e-08!41;UBERON:0006240!7.13e-08!41;UBERON:0000468!8.11e-08!659;UBERON:0000947!9.78e-08!21;UBERON:0010191!9.78e-08!21;UBERON:0003075!1.50e-07!86;UBERON:0007284!1.50e-07!86;UBERON:0002308!1.57e-07!9;UBERON:0000125!1.57e-07!9;UBERON:0004573!2.11e-07!33;UBERON:0004571!2.11e-07!33;UBERON:0002346!2.70e-07!90;UBERON:0001473!2.72e-07!8;UBERON:0004536!2.72e-07!8;UBERON:0006558!2.72e-07!8;UBERON:0000955!3.45e-07!69;UBERON:0006238!3.45e-07!69|ontology_enrichment_uberon_v019=UBERON:0004638;2.22e-41;18!UBERON:0001986;2.22e-41;18!UBERON:0004852;2.22e-41;18!UBERON:0003915;1.71e-34;9!UBERON:0004700;1.71e-34;9!UBERON:0001917;1.71e-34;9!UBERON:0000487;1.72e-33;22!UBERON:0006914;3.14e-29;25!UBERON:0000490;2.96e-20;33!UBERON:0007500;6.86e-17;56!UBERON:0001981;6.86e-17;56!UBERON:0004537;6.86e-17;56!UBERON:0000055;1.44e-16;65!UBERON:0001637;6.58e-16;42!UBERON:0003509;6.58e-16;42!UBERON:0004572;6.58e-16;42!UBERON:0000947;5.99e-14;21!UBERON:0010191;5.99e-14;21!UBERON:0001638;1.10e-11;9!UBERON:0003920;1.10e-11;9!UBERON:0004582;1.10e-11;9!UBERON:0004573;3.66e-11;33!UBERON:0004571;3.66e-11;33!UBERON:0002049;3.83e-11;75!UBERON:0007798;3.83e-11;75!UBERON:0003914;3.63e-08;74!UBERON:0001473;4.48e-08;8!UBERON:0004536;4.48e-08;8!UBERON:0006558;4.48e-08;8!UBERON:0001009;1.19e-07;112!UBERON:0000996;2.04e-07;1!UBERON:0004797;5.21e-07;4!UBERON:0000415;5.21e-07;4!UBERON:0007240;5.21e-07;4!UBERON:0005742;5.21e-07;4!UBERON:0005734;5.21e-07;4!UBERON:0004664;5.21e-07;4!UBERON:0004663;5.21e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.55e-41,18;UBERON:0001986,2.55e-41,18;UBERON:0004852,2.55e-41,18;UBERON:0003915,1.63e-34,9;UBERON:0004700,1.63e-34,9;UBERON:0001917,1.63e-34,9;UBERON:0000487,1.92e-33,22;UBERON:0006914,3.47e-29,25;UBERON:0000055,7.54e-27,68;UBERON:0002049,6.29e-23,78;UBERON:0007798,6.29e-23,78;UBERON:0007500,3.22e-21,59;UBERON:0001981,3.22e-21,59;UBERON:0004537,3.22e-21,59;UBERON:0006965,3.22e-21,59;UBERON:0001009,1.04e-16,112;UBERON:0004872,2.37e-16,83;UBERON:0001637,2.68e-16,42;UBERON:0003509,2.68e-16,42;UBERON:0004572,2.68e-16,42;UBERON:0004535,2.41e-15,109;UBERON:0000947,4.48e-14,21;UBERON:0010191,4.48e-14,21;UBERON:0003914,3.51e-12,117;UBERON:0001638,1.25e-11,9;UBERON:0003920,1.25e-11,9;UBERON:0004582,1.25e-11,9;UBERON:0004573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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000432793,uc010fca.1_5end | |||
|coexpression_cluster_id=C1237 | |||
|description=CAGE_peak_3_at_ENST00000432793_5end,CAGE_peak_3_at_uc010fca.1_5end | |||
|id=chr2:56412876..56412892,- | |||
|ontology_enrichment_celltype=CL:0002139!4.02e-20!24;CL:0000115!3.59e-17!35;CL:0000071!2.98e-14!18;CL:0002546!2.98e-14!18;CL:0002078!8.57e-12!44;CL:0000213!1.53e-09!57;CL:0000215!1.53e-09!57;CL:1000413!1.65e-09!9;CL:0005020!1.52e-07!6;CL:0002138!1.52e-07!6;CL:0005022!1.52e-07!6;CL:0000222!7.81e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.93e-50;24!CL:0000071;2.22e-41;18!CL:0000115;7.18e-37;36!CL:1000413;1.71e-34;9!CL:0002078;2.79e-23;45!CL:0000213;1.34e-18;58!CL:0000215;1.34e-18;58!CL:0002544;1.15e-17;6!CL:0002543;1.90e-17;6!CL:0002138;1.27e-10;6!CL:0002618;1.16e-09;3!CL:1000306;5.21e-07;4!CL:0002547;5.21e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.36e-50,24;CL:0000115,1.24e-42,36;CL:0000071,2.55e-41,18;CL:0002546,2.55e-41,18;CL:1000413,1.63e-34,9;CL:0002078,1.90e-33,45;CL:0000213,3.30e-25,58;CL:0000215,3.30e-25,58;CL:0002544,9.89e-18,6;CL:0002543,2.31e-17,6;CL:0000222,1.75e-13,121;CL:0005020,1.27e-10,6;CL:0002138,1.27e-10,6;CL:0005022,1.27e-10,6;CL:0000076,2.39e-10,63;CL:0002618,1.40e-09,3;CL:1000306,4.47e-07,4;CL:0002547,4.47e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;2.22e-41;18!CL:0005022;1.27e-10;6!UBERON:0003124;9.74e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.24e-31!115;UBERON:0000055!1.18e-21!69;UBERON:0004111!9.87e-20!241;UBERON:0002049!6.90e-19!79;UBERON:0007798!6.90e-19!79;UBERON:0000025!1.66e-18!194;UBERON:0000477!3.59e-17!286;UBERON:0001981!4.99e-17!60;UBERON:0007500!4.99e-17!60;UBERON:0004537!4.99e-17!60;UBERON:0006965!4.99e-17!60;UBERON:0004872!5.42e-17!84;UBERON:0001009!1.91e-16!113;UBERON:0004535!1.60e-14!110;UBERON:0001986!2.98e-14!18;UBERON:0004638!2.98e-14!18;UBERON:0004852!2.98e-14!18;UBERON:0003914!1.27e-11!118;UBERON:0000487!1.14e-10!22;UBERON:0001637!3.96e-10!42;UBERON:0003509!3.96e-10!42;UBERON:0004572!3.96e-10!42;UBERON:0003915!1.65e-09!9;UBERON:0004700!1.65e-09!9;UBERON:0001917!1.65e-09!9;UBERON:0001049!3.64e-09!57;UBERON:0005068!3.64e-09!57;UBERON:0006241!3.64e-09!57;UBERON:0007135!3.64e-09!57;UBERON:0002020!5.21e-09!34;UBERON:0003528!5.21e-09!34;UBERON:0000483!6.57e-09!309;UBERON:0001893!7.69e-09!34;UBERON:0006914!9.06e-09!25;UBERON:0002616!9.84e-09!59;UBERON:0000119!1.37e-08!312;UBERON:0003080!1.62e-08!42;UBERON:0002791!2.68e-08!33;UBERON:0001869!4.46e-08!32;UBERON:0002780!7.13e-08!41;UBERON:0001890!7.13e-08!41;UBERON:0006240!7.13e-08!41;UBERON:0000468!8.11e-08!659;UBERON:0000947!9.78e-08!21;UBERON:0010191!9.78e-08!21;UBERON:0003075!1.50e-07!86;UBERON:0007284!1.50e-07!86;UBERON:0002308!1.57e-07!9;UBERON:0000125!1.57e-07!9;UBERON:0004573!2.11e-07!33;UBERON:0004571!2.11e-07!33;UBERON:0002346!2.70e-07!90;UBERON:0001473!2.72e-07!8;UBERON:0004536!2.72e-07!8;UBERON:0006558!2.72e-07!8;UBERON:0000955!3.45e-07!69;UBERON:0006238!3.45e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.22e-41;18!UBERON:0001986;2.22e-41;18!UBERON:0004852;2.22e-41;18!UBERON:0003915;1.71e-34;9!UBERON:0004700;1.71e-34;9!UBERON:0001917;1.71e-34;9!UBERON:0000487;1.72e-33;22!UBERON:0006914;3.14e-29;25!UBERON:0000490;2.96e-20;33!UBERON:0007500;6.86e-17;56!UBERON:0001981;6.86e-17;56!UBERON:0004537;6.86e-17;56!UBERON:0000055;1.44e-16;65!UBERON:0001637;6.58e-16;42!UBERON:0003509;6.58e-16;42!UBERON:0004572;6.58e-16;42!UBERON:0000947;5.99e-14;21!UBERON:0010191;5.99e-14;21!UBERON:0001638;1.10e-11;9!UBERON:0003920;1.10e-11;9!UBERON:0004582;1.10e-11;9!UBERON:0004573;3.66e-11;33!UBERON:0004571;3.66e-11;33!UBERON:0002049;3.83e-11;75!UBERON:0007798;3.83e-11;75!UBERON:0003914;3.63e-08;74!UBERON:0001473;4.48e-08;8!UBERON:0004536;4.48e-08;8!UBERON:0006558;4.48e-08;8!UBERON:0001009;1.19e-07;112!UBERON:0000996;2.04e-07;1!UBERON:0004797;5.21e-07;4!UBERON:0000415;5.21e-07;4!UBERON:0007240;5.21e-07;4!UBERON:0005742;5.21e-07;4!UBERON:0005734;5.21e-07;4!UBERON:0004664;5.21e-07;4!UBERON:0004663;5.21e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.55e-41,18;UBERON:0001986,2.55e-41,18;UBERON:0004852,2.55e-41,18;UBERON:0003915,1.63e-34,9;UBERON:0004700,1.63e-34,9;UBERON:0001917,1.63e-34,9;UBERON:0000487,1.92e-33,22;UBERON:0006914,3.47e-29,25;UBERON:0000055,7.54e-27,68;UBERON:0002049,6.29e-23,78;UBERON:0007798,6.29e-23,78;UBERON:0007500,3.22e-21,59;UBERON:0001981,3.22e-21,59;UBERON:0004537,3.22e-21,59;UBERON:0006965,3.22e-21,59;UBERON:0001009,1.04e-16,112;UBERON:0004872,2.37e-16,83;UBERON:0001637,2.68e-16,42;UBERON:0003509,2.68e-16,42;UBERON:0004572,2.68e-16,42;UBERON:0004535,2.41e-15,109;UBERON:0000947,4.48e-14,21;UBERON:0010191,4.48e-14,21;UBERON:0003914,3.51e-12,117;UBERON:0001638,1.25e-11,9;UBERON:0003920,1.25e-11,9;UBERON:0004582,1.25e-11,9;UBERON:0004573,3.52e-11,33;UBERON:0004571,3.52e-11,33;UBERON:0004111,2.41e-09,240;UBERON:0001473,4.48e-08,8;UBERON:0004536,4.48e-08,8;UBERON:0006558,4.48e-08,8;UBERON:0000996,1.48e-07,1;UBERON:0003081,2.53e-07,203;UBERON:0000415,4.47e-07,4;UBERON:0007240,4.47e-07,4;UBERON:0005742,4.47e-07,4;UBERON:0005734,4.47e-07,4;UBERON:0004664,4.47e-07,4;UBERON:0004663,4.47e-07,4;UBERON:0000025,5.93e-07,192 | |||
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| |||
|short_description=p3@ENST00000432793,p3@uc010fca.1 | |||
}} |
Revision as of 19:06, 12 September 2013
Short description: | p3@ENST00000432793, p3@uc010fca.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENST00000432793_5end, CAGE_peak_3_at_uc010fca.1_5end |
Coexpression cluster: | C1237_Endothelial_Preadipocyte_Lymphatic_Renal_lung_heart_skin |
Association with transcript: | 12bp_to_ENST00000432793, uc010fca.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.36e-50 | 24 |
endothelial cell | 1.24e-42 | 36 |
blood vessel endothelial cell | 2.55e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.55e-41 | 18 |
endothelial cell of artery | 1.63e-34 | 9 |
meso-epithelial cell | 1.90e-33 | 45 |
lining cell | 3.30e-25 | 58 |
barrier cell | 3.30e-25 | 58 |
aortic endothelial cell | 9.89e-18 | 6 |
vein endothelial cell | 2.31e-17 | 6 |
mesodermal cell | 1.75e-13 | 121 |
lymphangioblast | 1.27e-10 | 6 |
endothelial cell of lymphatic vessel | 1.27e-10 | 6 |
vascular lymphangioblast | 1.27e-10 | 6 |
squamous epithelial cell | 2.39e-10 | 63 |
endothelial cell of umbilical vein | 1.40e-09 | 3 |
fibroblast of tunica adventitia of artery | 4.47e-07 | 4 |
fibroblast of the aortic adventitia | 4.47e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.