FFCP PHASE1:Hg19::chr3:135914495..135914504,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55167|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25544|TSSclassifier=S|UniProt=Q9HCI7|association_with_transcript=183bp_to_ENST00000309993,NM_018133,uc003eqx.1_5end|coexpression_cluster_id=C8|description=CAGE_peak_15_at_MSL2_5end|id=chr3:135914495..135914504,-|ontology_enrichment_celltype=CL:0000738!7.98e-22!140;CL:0000037!3.38e-19!172;CL:0000566!3.38e-19!172;CL:0000988!1.45e-17!182;CL:0002032!1.39e-15!165;CL:0000837!1.39e-15!165;CL:0002087!1.50e-14!119;CL:0002031!1.54e-14!124;CL:0000838!5.34e-12!52;CL:0000542!1.35e-11!53;CL:0000051!1.35e-11!53;CL:0000791!6.50e-10!18;CL:0000789!6.50e-10!18;CL:0002420!6.50e-10!18;CL:0002419!6.50e-10!18;CL:0000790!6.50e-10!18;CL:0000624!1.49e-08!6;CL:0000084!6.19e-08!25;CL:0000827!6.19e-08!25;CL:0000766!7.08e-07!76|ontology_enrichment_celltype_v019=CL:0000624;5.70e-27;6!CL:0000791;2.26e-22;18!CL:0000789;2.26e-22;18!CL:0002419;2.26e-22;18!CL:0000623;4.79e-21;3!CL:0000784;4.69e-20;3!CL:0000226;6.08e-20;3!CL:0000842;6.08e-20;3!CL:0000767;8.14e-20;3!CL:0000084;8.67e-16;25!CL:0000094;3.10e-13;8!CL:0000542;7.42e-11;53!CL:0002393;5.17e-10;6!CL:0002397;5.17e-10;6!CL:0000081;1.15e-09;11!CL:0000898;2.40e-09;3!CL:0000895;1.26e-07;1|ontology_enrichment_celltype_v019_2=CL:0000738,2.26e-27,136;CL:0000624,6.21e-27,6;CL:0000791,2.23e-22,18;CL:0000789,2.23e-22,18;CL:0002420,2.23e-22,18;CL:0002419,2.23e-22,18;CL:0000790,2.23e-22,18;CL:0000037,2.86e-21,168;CL:0000623,4.97e-21,3;CL:0000825,4.97e-21,3;CL:0000767,4.40e-20,3;CL:0000988,6.00e-20,177;CL:0000226,6.09e-20,3;CL:0000842,6.09e-20,3;CL:0000784,7.90e-20,3;CL:0000838,5.49e-19,52;CL:0000542,1.40e-18,53;CL:0000051,1.40e-18,53;CL:0002087,1.71e-18,115;CL:0000084,8.60e-16,25;CL:0000827,8.60e-16,25;CL:0002032,1.24e-13,161;CL:0000837,1.24e-13,161;CL:0000094,2.25e-13,8;CL:0002031,3.45e-12,120;CL:0000081,9.19e-10,11;CL:0000898,2.30e-09,3;CL:0000810,8.51e-08,1;CL:0000895,8.51e-08,1;CL:0002436,8.51e-08,1;CL:0002427,8.51e-08,1;CL:0002428,8.51e-08,1;CL:0002429,8.51e-08,1;CL:0002433,8.51e-08,1;CL:0002431,8.51e-08,1;CL:0002432,8.51e-08,1;CL:0000134,1.63e-07,354;CL:0002320,2.85e-07,361;CL:0002393,8.21e-07,9;CL:0002397,8.21e-07,9|ontology_enrichment_development_v019=CL:0000790;2.26e-22;18!CL:0000051;7.42e-11;53!CL:0002427;1.26e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.12e-07,371|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,1.96682138424452,3.45446458287491,1.70297735647684,0,0,0,0.309868802321207,0.426507697462265,0,1.10799081706375,1.40381113229099,1.73608696572681,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.425208599930087,0.419317291016752,0.22465726229299,0.300353785683013,0,0,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,3.52342313622563,1.91136614062614,3.96513985737078,0.560508562981536,0,2.55722701147983,3.14408610199332,5.14003747498773,0,0.32592226663359,0.473447805734733,0,0,1.17842362989935,1.32920336750173,0.812411591295047,0,0,0.164437904603676,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,0.113309342697566,1.91610246800961,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,8.66908995866349,6.95344509037119,3.76543450095277,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.26591592103773,3.10037811596945,1.14398982156026,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,6.5020150866636,4.09692392233083,4.36366323351144,0,1.30139853857622,0,0,0,0.749007023947182,5.9832291840805,0.828831026872071,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,1.6541442089831,1.2942852049117,4.16237475433433,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0.851692475380653,0.687010689511529,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0.99921590399346,0,0,0.146508179271894,0.121360521749513,0,0,0.95497793895076,0.593929361665277,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0.278847488557207,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0.182454789215666,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0.0984274815147488,0.338693328263138,0,0,0.321506296930038,0.137539436597234,0,0.674921674654501,0.77380195455795,0.0607495566580247,0.335434687599266,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0.395223263795889,0.365377795142688,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0.107824811396682,0.314531883711793,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33883824611688,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0.0918948995348449,0.250707539292375,0,0,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0.33639558774184,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0|short_description=p15@MSL2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55167 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25544 | |||
|TSSclassifier=S | |||
|UniProt=Q9HCI7 | |||
|association_with_transcript=183bp_to_ENST00000309993,NM_018133,uc003eqx.1_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_15_at_MSL2_5end | |||
|id=chr3:135914495..135914504,- | |||
|ontology_enrichment_celltype=CL:0000738!7.98e-22!140;CL:0000037!3.38e-19!172;CL:0000566!3.38e-19!172;CL:0000988!1.45e-17!182;CL:0002032!1.39e-15!165;CL:0000837!1.39e-15!165;CL:0002087!1.50e-14!119;CL:0002031!1.54e-14!124;CL:0000838!5.34e-12!52;CL:0000542!1.35e-11!53;CL:0000051!1.35e-11!53;CL:0000791!6.50e-10!18;CL:0000789!6.50e-10!18;CL:0002420!6.50e-10!18;CL:0002419!6.50e-10!18;CL:0000790!6.50e-10!18;CL:0000624!1.49e-08!6;CL:0000084!6.19e-08!25;CL:0000827!6.19e-08!25;CL:0000766!7.08e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000624;5.70e-27;6!CL:0000791;2.26e-22;18!CL:0000789;2.26e-22;18!CL:0002419;2.26e-22;18!CL:0000623;4.79e-21;3!CL:0000784;4.69e-20;3!CL:0000226;6.08e-20;3!CL:0000842;6.08e-20;3!CL:0000767;8.14e-20;3!CL:0000084;8.67e-16;25!CL:0000094;3.10e-13;8!CL:0000542;7.42e-11;53!CL:0002393;5.17e-10;6!CL:0002397;5.17e-10;6!CL:0000081;1.15e-09;11!CL:0000898;2.40e-09;3!CL:0000895;1.26e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.26e-27,136;CL:0000624,6.21e-27,6;CL:0000791,2.23e-22,18;CL:0000789,2.23e-22,18;CL:0002420,2.23e-22,18;CL:0002419,2.23e-22,18;CL:0000790,2.23e-22,18;CL:0000037,2.86e-21,168;CL:0000623,4.97e-21,3;CL:0000825,4.97e-21,3;CL:0000767,4.40e-20,3;CL:0000988,6.00e-20,177;CL:0000226,6.09e-20,3;CL:0000842,6.09e-20,3;CL:0000784,7.90e-20,3;CL:0000838,5.49e-19,52;CL:0000542,1.40e-18,53;CL:0000051,1.40e-18,53;CL:0002087,1.71e-18,115;CL:0000084,8.60e-16,25;CL:0000827,8.60e-16,25;CL:0002032,1.24e-13,161;CL:0000837,1.24e-13,161;CL:0000094,2.25e-13,8;CL:0002031,3.45e-12,120;CL:0000081,9.19e-10,11;CL:0000898,2.30e-09,3;CL:0000810,8.51e-08,1;CL:0000895,8.51e-08,1;CL:0002436,8.51e-08,1;CL:0002427,8.51e-08,1;CL:0002428,8.51e-08,1;CL:0002429,8.51e-08,1;CL:0002433,8.51e-08,1;CL:0002431,8.51e-08,1;CL:0002432,8.51e-08,1;CL:0000134,1.63e-07,354;CL:0002320,2.85e-07,361;CL:0002393,8.21e-07,9;CL:0002397,8.21e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;2.26e-22;18!CL:0000051;7.42e-11;53!CL:0002427;1.26e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.12e-07,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,1.96682138424452,3.45446458287491,1.70297735647684,0,0,0,0.309868802321207,0.426507697462265,0,1.10799081706375,1.40381113229099,1.73608696572681,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.425208599930087,0.419317291016752,0.22465726229299,0.300353785683013,0,0,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,3.52342313622563,1.91136614062614,3.96513985737078,0.560508562981536,0,2.55722701147983,3.14408610199332,5.14003747498773,0,0.32592226663359,0.473447805734733,0,0,1.17842362989935,1.32920336750173,0.812411591295047,0,0,0.164437904603676,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,0.113309342697566,1.91610246800961,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,8.66908995866349,6.95344509037119,3.76543450095277,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.26591592103773,3.10037811596945,1.14398982156026,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,6.5020150866636,4.09692392233083,4.36366323351144,0,1.30139853857622,0,0,0,0.749007023947182,5.9832291840805,0.828831026872071,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,1.6541442089831,1.2942852049117,4.16237475433433,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0.851692475380653,0.687010689511529,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0.99921590399346,0,0,0.146508179271894,0.121360521749513,0,0,0.95497793895076,0.593929361665277,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0.278847488557207,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0.182454789215666,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0.0984274815147488,0.338693328263138,0,0,0.321506296930038,0.137539436597234,0,0.674921674654501,0.77380195455795,0.0607495566580247,0.335434687599266,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0.395223263795889,0.365377795142688,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0.107824811396682,0.314531883711793,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33883824611688,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0.0918948995348449,0.250707539292375,0,0,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0.33639558774184,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p15@MSL2 | |||
}} |
Revision as of 21:41, 12 September 2013
Short description: | p15@MSL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_MSL2_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 183bp_to_ENST00000309993, NM_018133, uc003eqx.1_5end |
EntrezGene: | MSL2 |
HGNC: | 25544 |
UniProt: | Q9HCI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.12e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.