FFCP PHASE1:Hg19::chr3:39195139..39195150,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64651|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14300|TSSclassifier=S|UniProt=Q96S65|association_with_transcript=-37bp_to_ENST00000318290,NM_033027,uc003cjg.2_5end|coexpression_cluster_id=C2|description=CAGE_peak_3_at_CSRNP1_5end|id=chr3:39195139..39195150,-|ontology_enrichment_celltype=CL:0002057!7.50e-26!42;CL:0000738!3.01e-24!140;CL:0000860!2.23e-23!45;CL:0000766!2.10e-20!76;CL:0000037!4.78e-18!172;CL:0000566!4.78e-18!172;CL:0000988!1.33e-17!182;CL:0002031!2.19e-17!124;CL:0002087!3.33e-17!119;CL:0000557!3.48e-17!71;CL:0002032!4.53e-16!165;CL:0000837!4.53e-16!165;CL:0002009!4.83e-15!65;CL:0000839!2.52e-14!70;CL:0002194!4.59e-14!63;CL:0000576!4.59e-14!63;CL:0000040!4.59e-14!63;CL:0000559!4.59e-14!63;CL:0000763!6.46e-13!112;CL:0000049!6.46e-13!112;CL:0000094!4.27e-07!8|ontology_enrichment_celltype_v019=CL:0000860;1.23e-32;33!CL:0002057;1.23e-32;33!CL:0000473;8.19e-23;39!CL:0000234;8.19e-23;39!CL:0000576;1.06e-22;48!CL:0000766;1.16e-18;69!CL:0000094;2.95e-11;8!CL:0002087;3.82e-11;104!CL:0000738;1.64e-09;136!CL:0000081;5.36e-09;11!CL:0000763;1.99e-08;100!CL:0000624;1.42e-07;6!CL:0002393;1.93e-07;6!CL:0002397;1.93e-07;6|ontology_enrichment_celltype_v019_2=CL:0000860,4.09e-44,42;CL:0002057,4.09e-44,42;CL:0000738,1.28e-42,136;CL:0000766,5.74e-39,72;CL:0000473,4.65e-38,48;CL:0000234,4.65e-38,48;CL:0000557,5.47e-33,67;CL:0000037,9.10e-32,168;CL:0002031,7.21e-31,120;CL:0002087,1.34e-30,115;CL:0002009,1.44e-30,61;CL:0000988,3.61e-30,177;CL:0002194,1.01e-28,59;CL:0000576,1.01e-28,59;CL:0000040,1.01e-28,59;CL:0000559,1.01e-28,59;CL:0000839,1.12e-28,66;CL:0002032,8.08e-28,161;CL:0000837,8.08e-28,161;CL:0000763,1.73e-24,108;CL:0000049,1.73e-24,108;CL:0000094,3.07e-11,8;CL:0002393,1.92e-09,9;CL:0002397,1.92e-09,9;CL:0000134,4.91e-09,354;CL:0000081,6.47e-09,11;CL:0002320,2.40e-08,361;CL:0000624,1.38e-07,6|ontology_enrichment_development_v019=CL:0002057;1.13e-31;42!CL:0000049;1.50e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.31e-14!102;UBERON:0003061!1.31e-14!102;UBERON:0002371!3.30e-14!80;UBERON:0001474!4.38e-13!86;UBERON:0002193!1.46e-12!112;UBERON:0002405!6.53e-12!115;UBERON:0004765!6.75e-09!101;UBERON:0001434!6.75e-09!101;UBERON:0003081!5.51e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.20e-29,98;UBERON:0003061,3.20e-29,98;UBERON:0002371,3.11e-28,76;UBERON:0001474,7.98e-26,82;UBERON:0002193,1.53e-25,108;UBERON:0002405,1.03e-24,93;UBERON:0004765,6.72e-22,90;UBERON:0001434,6.13e-18,100;UBERON:0003081,7.81e-16,203;UBERON:0002384,8.62e-08,371;UBERON:0002204,1.80e-07,167|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,1.39560233594486,0,0.791300934685361,0,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0.136874425072884,0.125542639594803,0.229240217243854,0.328402357799783,0.0787107813136792,51.1373559903575,18.8076405067634,44.1225951450817,0,0.30120591877825,0.739508020333575,1.08454080812422,0.568676929949686,2.64240395401362,37.6716877801677,27.2740448559393,26.2583153566181,0,0,0,5.52513307362346,4.53451132426571,3.15359279544161,11.1565937714729,8.22335776043652,12.6979612066992,29.9200088015036,22.5421421745609,21.7563651497498,27.9244001396661,15.4916324060118,32.502356782642,8.65914761895982,7.36846605156184,7.41587498668779,21.4258724659632,12.1953030288916,19.8194508997703,9.56568770541477,12.7656740877844,8.09827026012119,19.4440189881151,10.2129340444405,13.0792672289071,33.6673211444036,30.7674921867919,25.1939059857935,25.4267791106015,13.6262725315399,15.1901945971625,2.95757400836718,4.46469029926591,2.30624510059213,6.62738923764321,3.45406853535464,1.92870704036496,4.27519115611873,2.18808344918999,1.27864907635244,0,1.09227722252426,0.889509253863555,0.853460445133014,2.00197993518006,0,0,0.954053754535364,6.83055562931338,6.45960908308033,11.8504700718821,11.8954195721123,10.6496626966492,1.84368859342554,15.9334913792205,14.9344089844683,32.8962398399215,1.17030546773475,5.21475626613745,4.73447805734733,1.94826728407911,0.334231370655521,6.77593587192126,2.87994062958707,2.43723477388514,0.25618263945135,0.650296737799391,0.328875809207352,0.552700035571697,0.869409257205157,3.70716407905151,3.21048993707656,1.04535523804977,0.679856056185397,3.44898444241729,3.09264700934367,2.27717722817553,0,0.651083453856419,0,0.903450714466637,0.76791966692651,0,0.236777252044017,0,21.7735282682711,19.7905744879795,15.4962112154595,0,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.378139268656271,0,0.614843499851882,0.982343066232845,0.364295288292542,0,0.324547393654683,0.348259474598534,0.398873881556595,10.0166062208244,2.85997455390064,6.68623502393217,0.39752481473341,0,1.38856200643038,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64651 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14300 | |||
|TSSclassifier=S | |||
|UniProt=Q96S65 | |||
|association_with_transcript=-37bp_to_ENST00000318290,NM_033027,uc003cjg.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_CSRNP1_5end | |||
|id=chr3:39195139..39195150,- | |||
|ontology_enrichment_celltype=CL:0002057!7.50e-26!42;CL:0000738!3.01e-24!140;CL:0000860!2.23e-23!45;CL:0000766!2.10e-20!76;CL:0000037!4.78e-18!172;CL:0000566!4.78e-18!172;CL:0000988!1.33e-17!182;CL:0002031!2.19e-17!124;CL:0002087!3.33e-17!119;CL:0000557!3.48e-17!71;CL:0002032!4.53e-16!165;CL:0000837!4.53e-16!165;CL:0002009!4.83e-15!65;CL:0000839!2.52e-14!70;CL:0002194!4.59e-14!63;CL:0000576!4.59e-14!63;CL:0000040!4.59e-14!63;CL:0000559!4.59e-14!63;CL:0000763!6.46e-13!112;CL:0000049!6.46e-13!112;CL:0000094!4.27e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.23e-32;33!CL:0002057;1.23e-32;33!CL:0000473;8.19e-23;39!CL:0000234;8.19e-23;39!CL:0000576;1.06e-22;48!CL:0000766;1.16e-18;69!CL:0000094;2.95e-11;8!CL:0002087;3.82e-11;104!CL:0000738;1.64e-09;136!CL:0000081;5.36e-09;11!CL:0000763;1.99e-08;100!CL:0000624;1.42e-07;6!CL:0002393;1.93e-07;6!CL:0002397;1.93e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.09e-44,42;CL:0002057,4.09e-44,42;CL:0000738,1.28e-42,136;CL:0000766,5.74e-39,72;CL:0000473,4.65e-38,48;CL:0000234,4.65e-38,48;CL:0000557,5.47e-33,67;CL:0000037,9.10e-32,168;CL:0002031,7.21e-31,120;CL:0002087,1.34e-30,115;CL:0002009,1.44e-30,61;CL:0000988,3.61e-30,177;CL:0002194,1.01e-28,59;CL:0000576,1.01e-28,59;CL:0000040,1.01e-28,59;CL:0000559,1.01e-28,59;CL:0000839,1.12e-28,66;CL:0002032,8.08e-28,161;CL:0000837,8.08e-28,161;CL:0000763,1.73e-24,108;CL:0000049,1.73e-24,108;CL:0000094,3.07e-11,8;CL:0002393,1.92e-09,9;CL:0002397,1.92e-09,9;CL:0000134,4.91e-09,354;CL:0000081,6.47e-09,11;CL:0002320,2.40e-08,361;CL:0000624,1.38e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-31;42!CL:0000049;1.50e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-14!102;UBERON:0003061!1.31e-14!102;UBERON:0002371!3.30e-14!80;UBERON:0001474!4.38e-13!86;UBERON:0002193!1.46e-12!112;UBERON:0002405!6.53e-12!115;UBERON:0004765!6.75e-09!101;UBERON:0001434!6.75e-09!101;UBERON:0003081!5.51e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.20e-29,98;UBERON:0003061,3.20e-29,98;UBERON:0002371,3.11e-28,76;UBERON:0001474,7.98e-26,82;UBERON:0002193,1.53e-25,108;UBERON:0002405,1.03e-24,93;UBERON:0004765,6.72e-22,90;UBERON:0001434,6.13e-18,100;UBERON:0003081,7.81e-16,203;UBERON:0002384,8.62e-08,371;UBERON:0002204,1.80e-07,167 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,1.39560233594486,0,0.791300934685361,0,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0.136874425072884,0.125542639594803,0.229240217243854,0.328402357799783,0.0787107813136792,51.1373559903575,18.8076405067634,44.1225951450817,0,0.30120591877825,0.739508020333575,1.08454080812422,0.568676929949686,2.64240395401362,37.6716877801677,27.2740448559393,26.2583153566181,0,0,0,5.52513307362346,4.53451132426571,3.15359279544161,11.1565937714729,8.22335776043652,12.6979612066992,29.9200088015036,22.5421421745609,21.7563651497498,27.9244001396661,15.4916324060118,32.502356782642,8.65914761895982,7.36846605156184,7.41587498668779,21.4258724659632,12.1953030288916,19.8194508997703,9.56568770541477,12.7656740877844,8.09827026012119,19.4440189881151,10.2129340444405,13.0792672289071,33.6673211444036,30.7674921867919,25.1939059857935,25.4267791106015,13.6262725315399,15.1901945971625,2.95757400836718,4.46469029926591,2.30624510059213,6.62738923764321,3.45406853535464,1.92870704036496,4.27519115611873,2.18808344918999,1.27864907635244,0,1.09227722252426,0.889509253863555,0.853460445133014,2.00197993518006,0,0,0.954053754535364,6.83055562931338,6.45960908308033,11.8504700718821,11.8954195721123,10.6496626966492,1.84368859342554,15.9334913792205,14.9344089844683,32.8962398399215,1.17030546773475,5.21475626613745,4.73447805734733,1.94826728407911,0.334231370655521,6.77593587192126,2.87994062958707,2.43723477388514,0.25618263945135,0.650296737799391,0.328875809207352,0.552700035571697,0.869409257205157,3.70716407905151,3.21048993707656,1.04535523804977,0.679856056185397,3.44898444241729,3.09264700934367,2.27717722817553,0,0.651083453856419,0,0.903450714466637,0.76791966692651,0,0.236777252044017,0,21.7735282682711,19.7905744879795,15.4962112154595,0,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.378139268656271,0,0.614843499851882,0.982343066232845,0.364295288292542,0,0.324547393654683,0.348259474598534,0.398873881556595,10.0166062208244,2.85997455390064,6.68623502393217,0.39752481473341,0,1.38856200643038,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.267899184852239,0.22452937262617,0.112611480483322,1.53316637465883,0.949265659568129,0.183201743930407,48.7587544513434,81.4338554711483,0,0,0.25326102332916,0.132409180813219,0,0,0,2.1349799145941,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0,0.309977343527296,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.907457465280168,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,0.386521706326594,0,0,0.243947412259191,0.397589304964456,0.464775771478074,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.269662616320329,0.196221465125346,0,1.4763109092493,1.40241773803446,0.4115740113314,0,0,1.96565443335525,0.590789906681404,0,0.491953754172454,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0.587043471179108,0.433099343283221,1.85194205030644,0,1.58040879591855,0,0,0,0,0,0.335964256397719,0,0,0,0,0.492663237895943,0.44024217006613,15.1349524344764,10.8089965062721,11.9930311755061,0.063497894292169,0,0,0,0,0.300343057843917,0,0.336393253036082,0.43596006883328,0.36669142910475,0.387815147273333,0,0.845302752556,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,1.58390374586686,0,0,0.199945982364114,1.2162378064119,0,0,0.479249710983165,0,0,0.144781306667579,0,0.179060963239896,1.00876629594175,16.9446453773657,18.328343863059,14.8877922084508,0.254094624222463,1.30139853857622,0.773288812777695,0.670065061337395,0,32.2073020297288,17.9496875522415,28.5946704270864,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0.343143423810856,7.23688091430106,11.6485668442053,12.8073069364133,6.36567900037145,1.66435439510497,1.5119514666484,0,0.460385919864187,0,0,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.464841513839837,0.604297247958111,0,0.0920809889358963,0,0,0,0.451199612907412,0.385076685522074,0,0,0.316654886678627,0,0.340187410553031,0.647747748306418,1.54227252690289,0.270946437543853,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,1.95227036798582,1.75169719801128,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0.384380134730212,1.53135254993501,0,0,0,1.3940745403212,0.924100740528266,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,1.32687795048244,0,0,0,1.01455188481352,0.6196469961995,0.84508680759672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| |||
|short_description=p3@CSRNP1 | |||
}} |
Revision as of 00:02, 13 September 2013
Short description: | p3@CSRNP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CSRNP1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -37bp_to_ENST00000318290, NM_033027, uc003cjg.2_5end |
EntrezGene: | CSRNP1 |
HGNC: | 14300 |
UniProt: | Q96S65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.09e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.09e-44 | 42 |
leukocyte | 1.28e-42 | 136 |
myeloid leukocyte | 5.74e-39 | 72 |
defensive cell | 4.65e-38 | 48 |
phagocyte | 4.65e-38 | 48 |
granulocyte monocyte progenitor cell | 5.47e-33 | 67 |
hematopoietic stem cell | 9.10e-32 | 168 |
hematopoietic lineage restricted progenitor cell | 7.21e-31 | 120 |
nongranular leukocyte | 1.34e-30 | 115 |
macrophage dendritic cell progenitor | 1.44e-30 | 61 |
hematopoietic cell | 3.61e-30 | 177 |
monopoietic cell | 1.01e-28 | 59 |
monocyte | 1.01e-28 | 59 |
monoblast | 1.01e-28 | 59 |
promonocyte | 1.01e-28 | 59 |
myeloid lineage restricted progenitor cell | 1.12e-28 | 66 |
hematopoietic oligopotent progenitor cell | 8.08e-28 | 161 |
hematopoietic multipotent progenitor cell | 8.08e-28 | 161 |
myeloid cell | 1.73e-24 | 108 |
common myeloid progenitor | 1.73e-24 | 108 |
granulocyte | 3.07e-11 | 8 |
intermediate monocyte | 1.92e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.92e-09 | 9 |
mesenchymal cell | 4.91e-09 | 354 |
blood cell | 6.47e-09 | 11 |
connective tissue cell | 2.40e-08 | 361 |
CD4-positive, alpha-beta T cell | 1.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.20e-29 | 98 |
blood island | 3.20e-29 | 98 |
bone marrow | 3.11e-28 | 76 |
bone element | 7.98e-26 | 82 |
hemolymphoid system | 1.53e-25 | 108 |
immune system | 1.03e-24 | 93 |
skeletal element | 6.72e-22 | 90 |
skeletal system | 6.13e-18 | 100 |
lateral plate mesoderm | 7.81e-16 | 203 |
connective tissue | 8.62e-08 | 371 |
musculoskeletal system | 1.80e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.